Experiment: MoYLS4 with Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0608 and DvMF_0609 are separated by 4 nucleotides DvMF_0609 and DvMF_0610 overlap by 4 nucleotides
DvMF_0608: DvMF_0608 - transcriptional regulator, NifA subfamily, Fis Family (RefSeq), at 720,022 to 721,605
_0608
DvMF_0609: DvMF_0609 - Indolepyruvate ferredoxin oxidoreductase (RefSeq), at 721,610 to 722,215
_0609
DvMF_0610: DvMF_0610 - indolepyruvate ferredoxin oxidoreductase, alpha subunit (RefSeq), at 722,212 to 724,101
_0610
Position (kb) 721
722
723 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 721.001 kb on - strand, within DvMF_0608 at 721.160 kb on - strand, within DvMF_0608 at 721.185 kb on - strand, within DvMF_0608 at 721.920 kb on + strand, within DvMF_0609 at 722.002 kb on - strand, within DvMF_0609 at 722.128 kb on - strand, within DvMF_0609 at 722.235 kb on + strand at 722.332 kb on + strand at 722.332 kb on + strand at 722.368 kb on - strand at 722.403 kb on + strand, within DvMF_0610 at 722.541 kb on + strand, within DvMF_0610 at 722.567 kb on + strand, within DvMF_0610 at 722.598 kb on - strand, within DvMF_0610 at 722.607 kb on - strand, within DvMF_0610 at 722.701 kb on - strand, within DvMF_0610 at 722.764 kb on - strand, within DvMF_0610 at 722.845 kb on - strand, within DvMF_0610 at 722.883 kb on - strand, within DvMF_0610 at 722.912 kb on + strand, within DvMF_0610 at 722.912 kb on + strand, within DvMF_0610 at 722.912 kb on + strand, within DvMF_0610 at 722.912 kb on + strand, within DvMF_0610 at 722.912 kb on + strand, within DvMF_0610 at 722.912 kb on + strand, within DvMF_0610 at 722.912 kb on + strand, within DvMF_0610 at 722.920 kb on - strand, within DvMF_0610 at 722.920 kb on - strand, within DvMF_0610 at 722.920 kb on - strand, within DvMF_0610 at 722.920 kb on - strand, within DvMF_0610 at 722.920 kb on - strand, within DvMF_0610 at 722.920 kb on - strand, within DvMF_0610 at 722.920 kb on - strand, within DvMF_0610 at 722.920 kb on - strand, within DvMF_0610 at 722.920 kb on - strand, within DvMF_0610 at 722.950 kb on - strand, within DvMF_0610
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1 mg/ml remove 721,001 - DvMF_0608 0.62 -3.0 721,160 - DvMF_0608 0.72 -2.7 721,185 - DvMF_0608 0.73 -4.0 721,920 + DvMF_0609 0.51 -2.7 722,002 - DvMF_0609 0.65 -1.7 722,128 - DvMF_0609 0.85 -2.8 722,235 + -1.5 722,332 + -2.4 722,332 + -2.2 722,368 - -0.6 722,403 + DvMF_0610 0.10 -2.7 722,541 + DvMF_0610 0.17 -2.0 722,567 + DvMF_0610 0.19 -1.6 722,598 - DvMF_0610 0.20 -2.1 722,607 - DvMF_0610 0.21 -1.0 722,701 - DvMF_0610 0.26 -1.4 722,764 - DvMF_0610 0.29 -1.4 722,845 - DvMF_0610 0.33 -1.4 722,883 - DvMF_0610 0.36 -1.6 722,912 + DvMF_0610 0.37 -2.0 722,912 + DvMF_0610 0.37 -2.1 722,912 + DvMF_0610 0.37 -1.6 722,912 + DvMF_0610 0.37 -2.7 722,912 + DvMF_0610 0.37 -2.2 722,912 + DvMF_0610 0.37 -2.5 722,912 + DvMF_0610 0.37 -1.7 722,920 - DvMF_0610 0.37 -3.9 722,920 - DvMF_0610 0.37 +0.0 722,920 - DvMF_0610 0.37 -1.3 722,920 - DvMF_0610 0.37 -1.4 722,920 - DvMF_0610 0.37 -0.8 722,920 - DvMF_0610 0.37 +0.2 722,920 - DvMF_0610 0.37 -2.2 722,920 - DvMF_0610 0.37 -2.1 722,920 - DvMF_0610 0.37 -1.0 722,950 - DvMF_0610 0.39 -2.1
Or see this region's nucleotide sequence