Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03723

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
3,890,409	+		CCNA_03722	0.80	+0.5
3,890,409	+		CCNA_03722	0.80	+1.1
3,890,421	+		CCNA_03722	0.80	+0.9
3,890,426	+		CCNA_03722	0.80	+1.3
3,890,429	-		CCNA_03722	0.81	-0.7
3,890,434	-		CCNA_03722	0.81	-1.4
3,890,459	+		CCNA_03722	0.81	+0.7
3,890,508	+		CCNA_03722	0.82	+2.3
3,890,563	+		CCNA_03722	0.83	+1.0
3,890,563	+		CCNA_03722	0.83	+1.6
3,890,563	+		CCNA_03722	0.83	+1.2
3,890,563	+		CCNA_03722	0.83	+0.3
3,890,571	-		CCNA_03722	0.84	-0.7
3,890,571	-		CCNA_03722	0.84	-1.8
3,890,573	+		CCNA_03722	0.84	+2.1
3,890,573	+		CCNA_03722	0.84	+0.6
3,890,573	-		CCNA_03722	0.84	-0.6
3,890,580	+		CCNA_03722	0.84	+0.3
3,890,583	-		CCNA_03722	0.84	-2.3
3,890,588	-		CCNA_03722	0.84	-1.1
3,890,607	+		CCNA_03722	0.84	+0.8
3,890,607	+		CCNA_03722	0.84	+1.1
3,890,611	+		CCNA_03722	0.85	+1.3
3,890,615	-		CCNA_03722	0.85	-1.3
3,890,621	-		CCNA_03722	0.85	-0.0
3,890,636	-		CCNA_03722	0.85	-0.2
3,890,664	+		CCNA_03722	0.86	+1.2
3,890,671	+		CCNA_03722	0.86	+1.0
3,890,694	+		CCNA_03722	0.86	+0.3
3,890,700	-		CCNA_03722	0.87	-1.2
3,890,711	+		CCNA_03722	0.87	+1.4
3,890,717	+		CCNA_03722	0.87	+1.5
3,890,719	-		CCNA_03722	0.87	-1.0
3,890,719	-		CCNA_03722	0.87	-0.5
3,890,719	-		CCNA_03722	0.87	-2.6
3,890,773	-		CCNA_03722	0.88	-0.6
3,890,773	-		CCNA_03722	0.88	-0.0
3,890,821	+		CCNA_03722	0.89	+1.0
3,890,823	+		CCNA_03722	0.89	+0.3
3,890,829	+		CCNA_03722	0.89	+1.0
3,890,829	-		CCNA_03722	0.89	+0.4
3,890,836	+		CCNA_03722	0.90	+1.3
3,890,836	+		CCNA_03722	0.90	+1.5
3,890,851	+		CCNA_03722	0.90	+1.3
3,890,859	-				+0.8
3,890,885	+				+0.8
3,890,899	+				+1.2
3,890,902	-				+0.5
3,890,909	+				+3.1
3,890,949	-				-0.8
3,890,951	+				+1.5
3,891,031	-				+0.0
3,891,031	-				+0.8
3,891,056	+				+1.5
3,891,088	+				+1.3
3,891,108	+				+2.2
3,891,199	-				+2.5
3,891,204	+				+1.9
3,891,226	+				+0.2
3,891,243	-				-2.1
3,891,248	+				+0.4
3,891,293	+				+0.1
3,891,301	-				-0.8
3,891,301	-				-0.9
3,891,301	-				+0.3
3,891,301	-				-1.9
3,891,301	-				-2.4
3,891,304	+				+0.1
3,891,304	+				+0.5
3,891,304	+				-1.9
3,891,304	+				+0.3
3,891,312	-				-0.7
3,891,312	-				-0.6
3,891,316	+				+0.6
3,891,341	+				-1.3
3,891,390	-				-0.5
3,891,416	+				-0.3
3,891,416	+				-1.4
3,891,416	+				-1.0
3,891,416	+				-3.0
3,891,424	-				-1.1
3,891,424	-				-0.6
3,891,464	+		CCNA_03723	0.17	-1.9
3,891,473	+		CCNA_03723	0.19	-2.2
3,891,531	+		CCNA_03723	0.32	-0.4
3,891,611	+		CCNA_03723	0.50	+0.2
3,891,612	+		CCNA_03723	0.51	-1.4
3,891,633	-		CCNA_03723	0.55	-0.8
3,891,664	+		CCNA_03723	0.63	-0.8
3,891,676	-		CCNA_03723	0.65	-1.8
3,891,685	+		CCNA_03723	0.67	+0.4
3,891,771	-		CCNA_03723	0.87	-0.8
3,891,834	-				-0.9
3,891,892	+				-1.6
3,891,923	-				-1.0
3,891,923	-				-1.5
3,891,952	+				+0.1
3,891,952	-				+1.1
3,891,969	+				+0.1
3,891,989	-				-0.7
3,892,036	-		CCNA_03724	0.16	-0.2
3,892,036	-		CCNA_03724	0.16	-1.6
3,892,103	+		CCNA_03724	0.25	-0.9
3,892,119	-		CCNA_03724	0.28	-0.8
3,892,193	-		CCNA_03724	0.38	-3.2
3,892,204	+		CCNA_03724	0.39	-0.8
3,892,211	-		CCNA_03724	0.40	-0.7
3,892,211	-		CCNA_03724	0.40	+0.7
3,892,238	+		CCNA_03724	0.44	-0.9
3,892,250	+		CCNA_03724	0.46	-1.0
3,892,292	+		CCNA_03724	0.51	+0.3
3,892,302	-		CCNA_03724	0.53	-2.3
3,892,316	+		CCNA_03724	0.55	-0.2
3,892,320	+		CCNA_03724	0.55	-2.4
3,892,380	-				+1.2
3,892,453	+		CCNA_03724	0.73	-0.8
3,892,453	+		CCNA_03724	0.73	-2.8
3,892,461	-		CCNA_03724	0.74	-1.1
3,892,461	-		CCNA_03724	0.74	-1.7
3,892,461	-		CCNA_03724	0.74	-2.1
3,892,461	-		CCNA_03724	0.74	-1.5
3,892,461	-		CCNA_03724	0.74	-0.8
3,892,461	-		CCNA_03724	0.74	-3.0
3,892,461	-		CCNA_03724	0.74	-0.3
3,892,470	-		CCNA_03724	0.76	+0.4
3,892,502	+		CCNA_03724	0.80	-0.7
3,892,510	-		CCNA_03724	0.81	-1.4
3,892,510	-		CCNA_03724	0.81	-1.4
3,892,635	+				+0.1
3,892,635	+				+1.3
3,892,640	+				+0.9
3,892,640	+				-1.7
3,892,640	+				-0.7
3,892,648	-				-0.1
3,892,686	+				-1.1
3,892,779	-				-0.6
3,892,779	-				-1.6
3,892,780	+				-0.1
3,892,798	-				-2.0
3,892,798	-				-0.2
3,892,817	+				-1.2
3,892,824	-				+0.5