Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03591

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
3,743,983	+				-1.3
3,744,027	+		CCNA_03589	0.12	-0.5
3,744,043	+		CCNA_03589	0.15	-1.9
3,744,051	-		CCNA_03589	0.16	-0.4
3,744,069	-		CCNA_03589	0.19	-0.7
3,744,085	+		CCNA_03589	0.22	+0.1
3,744,086	-		CCNA_03589	0.22	+0.9
3,744,093	-		CCNA_03589	0.23	+0.2
3,744,093	-		CCNA_03589	0.23	-0.6
3,744,152	-		CCNA_03589	0.33	+1.0
3,744,163	-		CCNA_03589	0.35	-2.1
3,744,168	-		CCNA_03589	0.35	-2.4
3,744,177	+		CCNA_03589	0.37	-0.2
3,744,189	+		CCNA_03589	0.39	-1.6
3,744,206	-		CCNA_03589	0.42	+0.1
3,744,208	-		CCNA_03589	0.42	-1.0
3,744,239	-		CCNA_03589	0.47	-1.3
3,744,341	-		CCNA_03589	0.64	-0.1
3,744,343	+		CCNA_03589	0.64	-0.3
3,744,343	+		CCNA_03589	0.64	-2.3
3,744,344	+		CCNA_03589	0.65	-0.9
3,744,350	+		CCNA_03589	0.66	+0.4
3,744,352	-		CCNA_03589	0.66	-1.1
3,744,352	-		CCNA_03589	0.66	-1.0
3,744,397	-		CCNA_03589	0.73	-1.4
3,744,397	-		CCNA_03589	0.73	-2.0
3,744,403	-		CCNA_03589	0.74	-0.6
3,744,456	+		CCNA_03589	0.83	-2.0
3,744,464	-		CCNA_03589	0.84	-0.8
3,744,482	+		CCNA_03589	0.87	-1.1
3,744,490	-		CCNA_03589	0.89	-1.4
3,744,536	+				+0.0
3,744,544	-				+1.0
3,744,544	-				-0.3
3,744,586	+		CCNA_03590	0.13	-0.9
3,744,594	-		CCNA_03590	0.18	+0.3
3,744,688	+		CCNA_03590	0.68	+0.4
3,744,691	-		CCNA_03590	0.70	+0.2
3,744,709	+				+3.6
3,744,723	+		CCNA_03590	0.87	+1.2
3,744,754	+				-0.3
3,744,762	+				+0.6
3,744,762	+				-0.3
3,744,762	+				-0.3
3,744,772	+				-0.9
3,744,813	-				-0.9
3,744,821	+				-0.4
3,744,879	+				+0.6
3,744,887	-				-2.4
3,744,919	+				+0.2
3,744,970	+				+3.6
3,744,970	+				-0.4
3,745,014	-				-2.3
3,745,038	-				-2.0
3,745,061	+		CCNA_03591	0.11	-1.2
3,745,109	-		CCNA_03591	0.17	-0.6
3,745,109	-		CCNA_03591	0.17	-0.8
3,745,109	-		CCNA_03591	0.17	+0.2
3,745,168	-		CCNA_03591	0.24	+0.4
3,745,170	+		CCNA_03591	0.24	+0.8
3,745,170	+		CCNA_03591	0.24	-2.1
3,745,178	-		CCNA_03591	0.25	-0.5
3,745,178	-		CCNA_03591	0.25	-1.5
3,745,202	-		CCNA_03591	0.28	-0.6
3,745,213	-		CCNA_03591	0.30	-1.0
3,745,283	+		CCNA_03591	0.39	-0.9
3,745,284	-		CCNA_03591	0.39	-0.8
3,745,303	+		CCNA_03591	0.41	+0.5
3,745,318	+		CCNA_03591	0.43	+1.1
3,745,383	-		CCNA_03591	0.51	-1.0
3,745,400	+		CCNA_03591	0.53	-2.0
3,745,400	+		CCNA_03591	0.53	-1.0
3,745,472	-		CCNA_03591	0.62	+1.6
3,745,472	-		CCNA_03591	0.62	-0.3
3,745,533	+		CCNA_03591	0.70	-0.7
3,745,533	+		CCNA_03591	0.70	-1.1
3,745,586	+		CCNA_03591	0.76	-1.0
3,745,586	+		CCNA_03591	0.76	+0.3
3,745,586	+		CCNA_03591	0.76	+0.6
3,745,595	+		CCNA_03591	0.78	-0.8
3,745,603	-		CCNA_03591	0.79	-1.6
3,745,609	+		CCNA_03591	0.79	-0.9
3,745,678	-		CCNA_03591	0.88	-0.6
3,745,736	-				-1.1
3,745,740	+				-0.9
3,745,758	+				+0.7
3,745,766	-				-0.2
3,745,778	+				-0.1
3,745,778	+				-0.3
3,745,778	+				+0.8
3,745,778	+				-0.1
3,745,778	+				+0.4
3,745,778	+				+0.4
3,745,779	+				-0.9
3,745,786	-				-0.5
3,745,799	-				-1.0
3,745,882	+				+0.9
3,745,882	+				+1.6
3,745,882	+				+0.4
3,745,882	+				+0.5
3,745,882	+				-0.2
3,745,882	+				-2.1
3,745,882	+				-0.7
3,745,887	+				+1.0
3,745,889	-				+0.2
3,745,914	-				-0.6
3,745,924	-				-1.6
3,745,985	+				+0.1
3,745,988	-				+1.1
3,745,993	-				+0.1
3,746,011	+				-0.4
3,746,018	+				+0.7
3,746,018	+				-1.1
3,746,018	+				-0.5
3,746,018	+				+0.2
3,746,018	+				-0.1
3,746,018	+				-0.5
3,746,018	+				-1.9
3,746,018	+				+2.2
3,746,019	-				+0.8
3,746,019	-				+0.8
3,746,026	-		CCNA_03592	0.11	-0.2
3,746,026	-		CCNA_03592	0.11	+1.0
3,746,026	-		CCNA_03592	0.11	+0.1
3,746,026	-		CCNA_03592	0.11	-0.4
3,746,026	-		CCNA_03592	0.11	+0.1
3,746,026	-		CCNA_03592	0.11	+0.3
3,746,026	-		CCNA_03592	0.11	+1.2
3,746,026	-		CCNA_03592	0.11	-1.0
3,746,026	-		CCNA_03592	0.11	+0.2
3,746,026	-		CCNA_03592	0.11	-1.2
3,746,026	-		CCNA_03592	0.11	+1.2
3,746,026	-		CCNA_03592	0.11	+0.2
3,746,026	-		CCNA_03592	0.11	-1.0
3,746,026	-		CCNA_03592	0.11	-2.9
3,746,026	-		CCNA_03592	0.11	+2.1
3,746,026	-		CCNA_03592	0.11	+1.6
3,746,032	+		CCNA_03592	0.12	-0.2
3,746,033	+		CCNA_03592	0.12	-0.9
3,746,040	-		CCNA_03592	0.14	-1.3
3,746,046	+		CCNA_03592	0.15	-1.9
3,746,052	-		CCNA_03592	0.16	+0.4
3,746,079	+		CCNA_03592	0.21	-1.9
3,746,087	-		CCNA_03592	0.22	-1.5
3,746,145	-		CCNA_03592	0.33	-1.5
3,746,147	-		CCNA_03592	0.33	-0.6
3,746,174	-		CCNA_03592	0.38	-0.8
3,746,180	+		CCNA_03592	0.39	-0.1
3,746,188	-		CCNA_03592	0.41	-0.6
3,746,188	-		CCNA_03592	0.41	-1.2
3,746,213	+		CCNA_03592	0.45	+0.1
3,746,213	+		CCNA_03592	0.45	-0.8
3,746,213	+		CCNA_03592	0.45	-2.7
3,746,213	+		CCNA_03592	0.45	-0.7
3,746,214	-		CCNA_03592	0.45	-0.7
3,746,221	-		CCNA_03592	0.47	-1.5
3,746,221	-		CCNA_03592	0.47	-0.5
3,746,221	-		CCNA_03592	0.47	-1.5
3,746,221	-		CCNA_03592	0.47	-0.9
3,746,232	-		CCNA_03592	0.49	-0.1
3,746,253	-		CCNA_03592	0.53	+0.8
3,746,270	+		CCNA_03592	0.56	-1.3
3,746,278	-		CCNA_03592	0.57	+0.7
3,746,278	-		CCNA_03592	0.57	-1.0
3,746,278	-		CCNA_03592	0.57	-2.1
3,746,300	+		CCNA_03592	0.61	+1.2
3,746,309	-		CCNA_03592	0.63	-2.3
3,746,323	-		CCNA_03592	0.65	+0.3
3,746,358	-		CCNA_03592	0.72	+0.1
3,746,374	-		CCNA_03592	0.75	+0.8
3,746,402	+		CCNA_03592	0.80	+0.2
3,746,460	+				-2.5
3,746,468	-				-0.4
3,746,486	-				+0.8
3,746,535	-				-0.2
3,746,551	-				+0.6
3,746,551	-				-1.5
3,746,552	-				+0.7
3,746,639	-				-0.8
3,746,694	+				-0.1