Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03589

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
3,742,966	-		CCNA_03588	0.42	-0.3
3,742,993	+		CCNA_03588	0.43	+0.3
3,743,080	-		CCNA_03588	0.49	-2.3
3,743,080	-		CCNA_03588	0.49	+2.0
3,743,236	-		CCNA_03588	0.58	+0.8
3,743,236	-		CCNA_03588	0.58	-1.7
3,743,317	+		CCNA_03588	0.62	+0.1
3,743,317	+		CCNA_03588	0.62	-1.1
3,743,376	-		CCNA_03588	0.66	-0.0
3,743,423	+		CCNA_03588	0.69	-1.2
3,743,431	-		CCNA_03588	0.69	-0.7
3,743,463	-		CCNA_03588	0.71	+1.3
3,743,463	-		CCNA_03588	0.71	+0.8
3,743,510	-		CCNA_03588	0.74	-1.6
3,743,526	-		CCNA_03588	0.75	-2.9
3,743,526	-		CCNA_03588	0.75	+0.1
3,743,526	-		CCNA_03588	0.75	-0.4
3,743,544	-		CCNA_03588	0.76	-1.5
3,743,554	-		CCNA_03588	0.76	-1.7
3,743,557	+		CCNA_03588	0.77	-2.4
3,743,599	-		CCNA_03588	0.79	-2.0
3,743,632	+		CCNA_03588	0.81	+0.8
3,743,632	+		CCNA_03588	0.81	-2.0
3,743,647	+		CCNA_03588	0.82	-2.0
3,743,699	+		CCNA_03588	0.85	-1.6
3,743,699	+		CCNA_03588	0.85	-1.1
3,743,699	+		CCNA_03588	0.85	-1.4
3,743,702	-		CCNA_03588	0.85	+0.0
3,743,702	-		CCNA_03588	0.85	-1.1
3,743,707	-		CCNA_03588	0.85	-1.1
3,743,720	+		CCNA_03588	0.86	-1.4
3,743,727	-		CCNA_03588	0.87	+0.6
3,743,734	-		CCNA_03588	0.87	-1.0
3,743,756	-		CCNA_03588	0.88	+0.0
3,743,759	+		CCNA_03588	0.88	-0.8
3,743,764	+		CCNA_03588	0.89	-0.7
3,743,834	+				-0.8
3,743,868	-				+0.2
3,743,883	+				+0.9
3,743,905	-				-0.7
3,743,983	+				-1.3
3,744,027	+		CCNA_03589	0.12	-0.5
3,744,043	+		CCNA_03589	0.15	-1.9
3,744,051	-		CCNA_03589	0.16	-0.4
3,744,069	-		CCNA_03589	0.19	-0.7
3,744,085	+		CCNA_03589	0.22	+0.1
3,744,086	-		CCNA_03589	0.22	+0.9
3,744,093	-		CCNA_03589	0.23	+0.2
3,744,093	-		CCNA_03589	0.23	-0.6
3,744,152	-		CCNA_03589	0.33	+1.0
3,744,163	-		CCNA_03589	0.35	-2.1
3,744,168	-		CCNA_03589	0.35	-2.4
3,744,177	+		CCNA_03589	0.37	-0.2
3,744,189	+		CCNA_03589	0.39	-1.6
3,744,206	-		CCNA_03589	0.42	+0.1
3,744,208	-		CCNA_03589	0.42	-1.0
3,744,239	-		CCNA_03589	0.47	-1.3
3,744,341	-		CCNA_03589	0.64	-0.1
3,744,343	+		CCNA_03589	0.64	-0.3
3,744,343	+		CCNA_03589	0.64	-2.3
3,744,344	+		CCNA_03589	0.65	-0.9
3,744,350	+		CCNA_03589	0.66	+0.4
3,744,352	-		CCNA_03589	0.66	-1.1
3,744,352	-		CCNA_03589	0.66	-1.0
3,744,397	-		CCNA_03589	0.73	-1.4
3,744,397	-		CCNA_03589	0.73	-2.0
3,744,403	-		CCNA_03589	0.74	-0.6
3,744,456	+		CCNA_03589	0.83	-2.0
3,744,464	-		CCNA_03589	0.84	-0.8
3,744,482	+		CCNA_03589	0.87	-1.1
3,744,490	-		CCNA_03589	0.89	-1.4
3,744,536	+				+0.0
3,744,544	-				+1.0
3,744,544	-				-0.3
3,744,586	+		CCNA_03590	0.13	-0.9
3,744,594	-		CCNA_03590	0.18	+0.3
3,744,688	+		CCNA_03590	0.68	+0.4
3,744,691	-		CCNA_03590	0.70	+0.2
3,744,709	+				+3.6
3,744,723	+		CCNA_03590	0.87	+1.2
3,744,754	+				-0.3
3,744,762	+				+0.6
3,744,762	+				-0.3
3,744,762	+				-0.3
3,744,772	+				-0.9
3,744,813	-				-0.9
3,744,821	+				-0.4
3,744,879	+				+0.6
3,744,887	-				-2.4
3,744,919	+				+0.2
3,744,970	+				+3.6
3,744,970	+				-0.4
3,745,014	-				-2.3
3,745,038	-				-2.0
3,745,061	+		CCNA_03591	0.11	-1.2
3,745,109	-		CCNA_03591	0.17	-0.6
3,745,109	-		CCNA_03591	0.17	-0.8
3,745,109	-		CCNA_03591	0.17	+0.2
3,745,168	-		CCNA_03591	0.24	+0.4
3,745,170	+		CCNA_03591	0.24	+0.8
3,745,170	+		CCNA_03591	0.24	-2.1
3,745,178	-		CCNA_03591	0.25	-0.5
3,745,178	-		CCNA_03591	0.25	-1.5
3,745,202	-		CCNA_03591	0.28	-0.6
3,745,213	-		CCNA_03591	0.30	-1.0
3,745,283	+		CCNA_03591	0.39	-0.9
3,745,284	-		CCNA_03591	0.39	-0.8
3,745,303	+		CCNA_03591	0.41	+0.5
3,745,318	+		CCNA_03591	0.43	+1.1
3,745,383	-		CCNA_03591	0.51	-1.0
3,745,400	+		CCNA_03591	0.53	-2.0
3,745,400	+		CCNA_03591	0.53	-1.0
3,745,472	-		CCNA_03591	0.62	+1.6
3,745,472	-		CCNA_03591	0.62	-0.3
3,745,533	+		CCNA_03591	0.70	-0.7
3,745,533	+		CCNA_03591	0.70	-1.1