Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03588

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
3,741,273	+		CCNA_03586	0.17	+1.4
3,741,281	-		CCNA_03586	0.18	-0.3
3,741,281	-		CCNA_03586	0.18	-1.3
3,741,282	+		CCNA_03586	0.18	+0.7
3,741,309	+		CCNA_03586	0.22	+0.6
3,741,309	+		CCNA_03586	0.22	+0.6
3,741,333	+		CCNA_03586	0.24	+1.4
3,741,370	+		CCNA_03586	0.29	+1.5
3,741,397	-		CCNA_03586	0.32	+0.9
3,741,403	+		CCNA_03586	0.33	+0.6
3,741,508	+		CCNA_03586	0.45	+0.6
3,741,510	-		CCNA_03586	0.46	-2.4
3,741,513	+		CCNA_03586	0.46	-0.3
3,741,521	-		CCNA_03586	0.47	-0.9
3,741,624	-		CCNA_03586	0.59	-1.5
3,741,641	-		CCNA_03586	0.61	+0.2
3,741,654	+		CCNA_03586	0.63	+0.6
3,741,655	+		CCNA_03586	0.63	+0.2
3,741,662	+		CCNA_03586	0.64	+0.6
3,741,707	+		CCNA_03586	0.69	-0.7
3,741,743	+		CCNA_03586	0.74	+0.8
3,741,757	+		CCNA_03586	0.75	+1.7
3,741,812	-		CCNA_03586	0.82	-0.7
3,741,815	+		CCNA_03586	0.82	+1.3
3,741,850	+		CCNA_03586	0.87	+0.7
3,741,850	-		CCNA_03586	0.87	-1.4
3,741,865	-		CCNA_03586	0.88	-0.7
3,741,896	+				+0.8
3,741,934	+				+0.2
3,741,934	+				+0.4
3,741,942	-				-0.5
3,741,987	+				-0.7
3,742,011	+				-0.6
3,742,049	-		CCNA_03587	0.20	+1.0
3,742,049	-		CCNA_03587	0.20	-0.8
3,742,077	+		CCNA_03587	0.40	+1.0
3,742,077	+		CCNA_03587	0.40	+1.7
3,742,099	+		CCNA_03587	0.55	-0.9
3,742,135	-		CCNA_03587	0.80	+0.7
3,742,136	-		CCNA_03587	0.81	-1.9
3,742,144	-		CCNA_03587	0.86	-0.2
3,742,191	-				+0.6
3,742,216	+				-1.0
3,742,224	-				+0.6
3,742,253	-				+0.6
3,742,253	-				-0.2
3,742,253	-				+0.6
3,742,265	+				-0.9
3,742,300	+				+0.8
3,742,308	-				-0.8
3,742,349	-				+1.6
3,742,417	-				+0.8
3,742,417	-				+1.0
3,742,425	+		CCNA_03588	0.10	+1.0
3,742,461	+		CCNA_03588	0.12	-0.8
3,742,510	-		CCNA_03588	0.15	-1.6
3,742,576	+		CCNA_03588	0.19	-0.9
3,742,589	-		CCNA_03588	0.20	-1.8
3,742,593	+		CCNA_03588	0.20	+0.3
3,742,647	+		CCNA_03588	0.23	-0.1
3,742,655	-		CCNA_03588	0.24	-1.3
3,742,675	+		CCNA_03588	0.25	-1.1
3,742,690	+		CCNA_03588	0.26	-0.7
3,742,713	+		CCNA_03588	0.27	-0.9
3,742,719	+		CCNA_03588	0.27	-1.1
3,742,726	-		CCNA_03588	0.28	-0.9
3,742,726	-		CCNA_03588	0.28	-1.4
3,742,815	-		CCNA_03588	0.33	-1.3
3,742,864	-		CCNA_03588	0.36	-0.8
3,742,884	-		CCNA_03588	0.37	+0.1
3,742,886	+		CCNA_03588	0.37	-1.0
3,742,886	+		CCNA_03588	0.37	-1.6
3,742,894	-		CCNA_03588	0.38	-0.7
3,742,966	-		CCNA_03588	0.42	-0.3
3,742,993	+		CCNA_03588	0.43	+0.3
3,743,080	-		CCNA_03588	0.49	-2.3
3,743,080	-		CCNA_03588	0.49	+2.0
3,743,236	-		CCNA_03588	0.58	+0.8
3,743,236	-		CCNA_03588	0.58	-1.7
3,743,317	+		CCNA_03588	0.62	+0.1
3,743,317	+		CCNA_03588	0.62	-1.1
3,743,376	-		CCNA_03588	0.66	-0.0
3,743,423	+		CCNA_03588	0.69	-1.2
3,743,431	-		CCNA_03588	0.69	-0.7
3,743,463	-		CCNA_03588	0.71	+1.3
3,743,463	-		CCNA_03588	0.71	+0.8
3,743,510	-		CCNA_03588	0.74	-1.6
3,743,526	-		CCNA_03588	0.75	-2.9
3,743,526	-		CCNA_03588	0.75	+0.1
3,743,526	-		CCNA_03588	0.75	-0.4
3,743,544	-		CCNA_03588	0.76	-1.5
3,743,554	-		CCNA_03588	0.76	-1.7
3,743,557	+		CCNA_03588	0.77	-2.4
3,743,599	-		CCNA_03588	0.79	-2.0
3,743,632	+		CCNA_03588	0.81	+0.8
3,743,632	+		CCNA_03588	0.81	-2.0
3,743,647	+		CCNA_03588	0.82	-2.0
3,743,699	+		CCNA_03588	0.85	-1.6
3,743,699	+		CCNA_03588	0.85	-1.1
3,743,699	+		CCNA_03588	0.85	-1.4
3,743,702	-		CCNA_03588	0.85	+0.0
3,743,702	-		CCNA_03588	0.85	-1.1
3,743,707	-		CCNA_03588	0.85	-1.1
3,743,720	+		CCNA_03588	0.86	-1.4
3,743,727	-		CCNA_03588	0.87	+0.6
3,743,734	-		CCNA_03588	0.87	-1.0
3,743,756	-		CCNA_03588	0.88	+0.0
3,743,759	+		CCNA_03588	0.88	-0.8
3,743,764	+		CCNA_03588	0.89	-0.7
3,743,834	+				-0.8
3,743,868	-				+0.2
3,743,883	+				+0.9
3,743,905	-				-0.7
3,743,983	+				-1.3
3,744,027	+		CCNA_03589	0.12	-0.5
3,744,043	+		CCNA_03589	0.15	-1.9
3,744,051	-		CCNA_03589	0.16	-0.4
3,744,069	-		CCNA_03589	0.19	-0.7
3,744,085	+		CCNA_03589	0.22	+0.1
3,744,086	-		CCNA_03589	0.22	+0.9
3,744,093	-		CCNA_03589	0.23	+0.2
3,744,093	-		CCNA_03589	0.23	-0.6
3,744,152	-		CCNA_03589	0.33	+1.0
3,744,163	-		CCNA_03589	0.35	-2.1
3,744,168	-		CCNA_03589	0.35	-2.4
3,744,177	+		CCNA_03589	0.37	-0.2
3,744,189	+		CCNA_03589	0.39	-1.6
3,744,206	-		CCNA_03589	0.42	+0.1
3,744,208	-		CCNA_03589	0.42	-1.0
3,744,239	-		CCNA_03589	0.47	-1.3
3,744,341	-		CCNA_03589	0.64	-0.1
3,744,343	+		CCNA_03589	0.64	-0.3
3,744,343	+		CCNA_03589	0.64	-2.3
3,744,344	+		CCNA_03589	0.65	-0.9
3,744,350	+		CCNA_03589	0.66	+0.4
3,744,352	-		CCNA_03589	0.66	-1.1
3,744,352	-		CCNA_03589	0.66	-1.0
3,744,397	-		CCNA_03589	0.73	-1.4
3,744,397	-		CCNA_03589	0.73	-2.0
3,744,403	-		CCNA_03589	0.74	-0.6
3,744,456	+		CCNA_03589	0.83	-2.0
3,744,464	-		CCNA_03589	0.84	-0.8
3,744,482	+		CCNA_03589	0.87	-1.1
3,744,490	-		CCNA_03589	0.89	-1.4
3,744,536	+				+0.0
3,744,544	-				+1.0
3,744,544	-				-0.3
3,744,586	+		CCNA_03590	0.13	-0.9
3,744,594	-		CCNA_03590	0.18	+0.3
3,744,688	+		CCNA_03590	0.68	+0.4
3,744,691	-		CCNA_03590	0.70	+0.2
3,744,709	+				+3.6
3,744,723	+		CCNA_03590	0.87	+1.2
3,744,754	+				-0.3
3,744,762	+				+0.6
3,744,762	+				-0.3
3,744,762	+				-0.3
3,744,772	+				-0.9
3,744,813	-				-0.9
3,744,821	+				-0.4
3,744,879	+				+0.6
3,744,887	-				-2.4
3,744,919	+				+0.2