Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03250

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
3,420,460	+		CCNA_03249	0.68	+0.8
3,420,461	-		CCNA_03249	0.68	-0.8
3,420,464	+		CCNA_03249	0.68	-0.8
3,420,468	-		CCNA_03249	0.68	-1.3
3,420,468	-		CCNA_03249	0.68	-0.2
3,420,558	+		CCNA_03249	0.72	+0.8
3,420,589	+		CCNA_03249	0.73	+1.2
3,420,612	-		CCNA_03249	0.74	+1.4
3,420,625	-		CCNA_03249	0.75	+0.3
3,420,625	-		CCNA_03249	0.75	-1.2
3,420,635	+		CCNA_03249	0.75	+0.1
3,420,659	-		CCNA_03249	0.76	-0.3
3,420,669	-		CCNA_03249	0.76	-0.9
3,420,669	-		CCNA_03249	0.76	+1.4
3,420,671	+		CCNA_03249	0.77	-1.5
3,420,679	-		CCNA_03249	0.77	-0.6
3,420,725	+		CCNA_03249	0.79	-0.9
3,420,783	+		CCNA_03249	0.81	-0.1
3,420,789	+		CCNA_03249	0.81	+0.2
3,420,789	+		CCNA_03249	0.81	+0.3
3,420,823	+		CCNA_03249	0.83	-0.0
3,420,831	-		CCNA_03249	0.83	-1.1
3,420,841	-		CCNA_03249	0.83	-0.4
3,420,856	+		CCNA_03249	0.84	-0.2
3,420,860	-				+2.4
3,420,878	+		CCNA_03249	0.85	+0.7
3,420,879	+		CCNA_03249	0.85	+0.1
3,420,886	-		CCNA_03249	0.85	+2.0
3,420,887	-		CCNA_03249	0.85	-1.8
3,420,887	-		CCNA_03249	0.85	-1.3
3,420,917	+		CCNA_03249	0.86	+0.8
3,421,043	+				-0.2
3,421,044	+				-0.5
3,421,054	+				-0.2
3,421,102	+				+1.8
3,421,105	-				+0.5
3,421,120	+				+0.7
3,421,129	-				-0.5
3,421,151	-				-1.3
3,421,158	+				+0.7
3,421,158	+				+0.1
3,421,168	+				-0.2
3,421,168	+				+0.7
3,421,171	-				-1.6
3,421,176	-				-0.8
3,421,176	-				-0.2
3,421,213	+				-0.5
3,421,226	-				-0.9
3,421,266	-				+0.3
3,421,304	-				+0.5
3,421,330	+				-2.8
3,421,335	+				+0.1
3,421,343	-				-2.2
3,421,343	-				-2.3
3,421,356	+				-0.6
3,421,399	+				-0.4
3,421,437	+				-0.4
3,421,464	+				+1.2
3,421,464	+				-2.5
3,421,464	+				-0.5
3,421,464	+				-0.3
3,421,464	+				+0.7
3,421,465	+				-1.3
3,421,465	+				+0.0
3,421,472	-				-0.2
3,421,472	-				+1.1
3,421,472	-				-0.5
3,421,473	-				+0.4
3,421,473	-				-0.4
3,421,473	-				+1.0
3,421,493	+				-0.8
3,421,537	+				+0.4
3,421,545	-		CCNA_03250	0.11	-1.1
3,421,546	+		CCNA_03250	0.11	-1.1
3,421,554	-		CCNA_03250	0.12	+0.2
3,421,594	+		CCNA_03250	0.17	+1.0
3,421,646	+		CCNA_03250	0.23	-0.3
3,421,665	-		CCNA_03250	0.25	-0.3
3,421,682	-		CCNA_03250	0.28	+0.5
3,421,699	-		CCNA_03250	0.30	-1.1
3,421,699	-		CCNA_03250	0.30	-0.8
3,421,699	-		CCNA_03250	0.30	-0.4
3,421,703	+		CCNA_03250	0.30	-0.1
3,421,711	-		CCNA_03250	0.31	-0.1
3,421,711	-		CCNA_03250	0.31	+0.7
3,421,754	-		CCNA_03250	0.36	+0.8
3,421,810	-		CCNA_03250	0.43	-1.0
3,421,867	+		CCNA_03250	0.50	-0.5
3,421,940	+		CCNA_03250	0.59	-1.2
3,421,941	+		CCNA_03250	0.59	+1.4
3,421,941	+		CCNA_03250	0.59	-1.4
3,421,941	+		CCNA_03250	0.59	-1.2
3,421,942	+		CCNA_03250	0.59	-0.1
3,421,949	-		CCNA_03250	0.60	-0.3
3,421,949	-		CCNA_03250	0.60	+0.3
3,421,960	+		CCNA_03250	0.62	-0.1
3,421,991	+		CCNA_03250	0.65	-1.4
3,421,999	-		CCNA_03250	0.66	+0.1
3,422,045	+		CCNA_03250	0.72	+0.7
3,422,053	-		CCNA_03250	0.73	-1.9
3,422,058	+		CCNA_03250	0.74	-0.0
3,422,071	+		CCNA_03250	0.75	+1.9
3,422,073	+		CCNA_03250	0.75	+0.4
3,422,089	-		CCNA_03250	0.77	-1.6
3,422,117	+		CCNA_03250	0.81	-0.3
3,422,144	+		CCNA_03250	0.84	+0.7
3,422,144	+		CCNA_03250	0.84	-0.2
3,422,144	+		CCNA_03250	0.84	+0.4
3,422,149	+		CCNA_03250	0.85	+0.5
3,422,149	+		CCNA_03250	0.85	-1.5
3,422,152	-		CCNA_03250	0.85	-0.8
3,422,152	-		CCNA_03250	0.85	-0.5
3,422,152	-		CCNA_03250	0.85	-0.5
3,422,152	-		CCNA_03250	0.85	-0.3
3,422,152	-		CCNA_03250	0.85	-0.2
3,422,152	-		CCNA_03250	0.85	+0.2
3,422,152	-		CCNA_03250	0.85	-0.5
3,422,298	-				+0.6
3,422,315	-		CCNA_03989	0.11	+1.6
3,422,357	-		CCNA_03989	0.16	+1.7
3,422,394	-		CCNA_03989	0.19	+1.0
3,422,411	+		CCNA_03989	0.21	+0.1
3,422,417	+		CCNA_03989	0.22	-0.0
3,422,419	-		CCNA_03989	0.22	+1.4
3,422,430	+		CCNA_03989	0.23	-0.2
3,422,436	-		CCNA_03989	0.24	+1.4
3,422,436	-		CCNA_03989	0.24	+1.0
3,422,443	+		CCNA_03989	0.24	-0.4
3,422,446	-		CCNA_03989	0.25	+1.2
3,422,453	+		CCNA_03989	0.26	-0.0
3,422,453	+		CCNA_03989	0.26	+0.2
3,422,461	-		CCNA_03989	0.26	+1.4
3,422,461	-		CCNA_03989	0.26	+1.4
3,422,461	-		CCNA_03989	0.26	+0.7
3,422,466	-		CCNA_03989	0.27	+2.0
3,422,466	-		CCNA_03989	0.27	+1.2
3,422,466	-		CCNA_03989	0.27	+1.5
3,422,467	+		CCNA_03989	0.27	+0.5
3,422,477	-		CCNA_03989	0.28	+1.6
3,422,485	-		CCNA_03989	0.29	+2.2
3,422,485	-		CCNA_03989	0.29	+0.9
3,422,498	-		CCNA_03989	0.30	+1.4
3,422,536	-		CCNA_03989	0.34	+1.3
3,422,536	-		CCNA_03989	0.34	+0.9
3,422,541	-		CCNA_03989	0.35	+1.3
3,422,541	-		CCNA_03989	0.35	+1.2
3,422,541	-		CCNA_03989	0.35	+1.5
3,422,547	-		CCNA_03989	0.35	+1.8
3,422,576	+		CCNA_03989	0.38	+0.5
3,422,606	-		CCNA_03989	0.41	+1.3
3,422,631	-		CCNA_03989	0.44	+1.6
3,422,676	+		CCNA_03989	0.49	+0.3
3,422,679	-		CCNA_03989	0.49	+1.3
3,422,684	-		CCNA_03989	0.50	+1.2
3,422,684	-		CCNA_03989	0.50	+1.0
3,422,685	-		CCNA_03989	0.50	+1.4
3,422,714	-		CCNA_03989	0.53	+1.5
3,422,718	-		CCNA_03989	0.53	+1.2
3,422,718	-		CCNA_03989	0.53	+2.2
3,422,722	-		CCNA_03989	0.54	+3.6
3,422,779	+		CCNA_03989	0.59	+1.2
3,422,824	+		CCNA_03989	0.64	+0.4
3,422,836	-		CCNA_03989	0.65	+0.8
3,422,853	-		CCNA_03989	0.67	+2.4
3,422,858	-		CCNA_03989	0.68	+0.9
3,422,860	+		CCNA_03989	0.68	-1.2
3,422,927	+		CCNA_03989	0.75	+0.3
3,422,927	+		CCNA_03989	0.75	-1.5
3,422,954	-		CCNA_03989	0.78	+2.2
3,422,955	+		CCNA_03989	0.78	+0.2
3,423,019	+		CCNA_03989	0.84	+0.2
3,423,027	-		CCNA_03989	0.85	+1.5
3,423,055	-		CCNA_03989	0.88	+1.7
3,423,064	-		CCNA_03989	0.89	+1.4
3,423,064	-		CCNA_03989	0.89	+0.4
3,423,109	-				+0.9
3,423,133	+				-0.0
3,423,138	+				-0.5
3,423,234	-				-1.2