Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03026

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
3,179,785	+		CCNA_03024	0.54	-0.5
3,179,785	+		CCNA_03024	0.54	+0.6
3,179,793	-		CCNA_03024	0.55	+1.3
3,179,793	-				+3.4
3,179,793	-		CCNA_03024	0.55	-0.4
3,179,793	-		CCNA_03024	0.55	+0.5
3,179,793	-		CCNA_03024	0.55	+0.1
3,179,793	-		CCNA_03024	0.55	+0.2
3,179,848	+		CCNA_03024	0.61	-0.5
3,179,848	+		CCNA_03024	0.61	+0.7
3,179,856	-		CCNA_03024	0.62	-1.4
3,179,856	-		CCNA_03024	0.62	+1.1
3,179,856	-		CCNA_03024	0.62	+0.2
3,179,856	-		CCNA_03024	0.62	+0.9
3,179,914	-		CCNA_03024	0.68	+1.1
3,179,918	+		CCNA_03024	0.69	+0.3
3,179,918	+		CCNA_03024	0.69	+0.7
3,179,936	-		CCNA_03024	0.71	+0.8
3,179,974	+		CCNA_03024	0.75	-0.9
3,179,974	+		CCNA_03024	0.75	-0.4
3,179,980	-		CCNA_03024	0.76	+0.0
3,179,982	-		CCNA_03024	0.76	+0.6
3,180,070	+		CCNA_03024	0.86	+0.9
3,180,078	-		CCNA_03024	0.87	+0.6
3,180,078	-				+1.7
3,180,078	-		CCNA_03024	0.87	+1.0
3,180,078	-		CCNA_03024	0.87	-0.5
3,180,093	+		CCNA_03024	0.88	+2.4
3,180,105	+		CCNA_03024	0.90	-0.6
3,180,149	+				-0.2
3,180,159	+				+3.0
3,180,184	-				-1.2
3,180,188	+				+1.4
3,180,208	-				-1.3
3,180,227	+				-1.9
3,180,240	+				-0.6
3,180,299	+				-0.7
3,180,314	+				+0.2
3,180,317	-				-1.1
3,180,317	-				-0.9
3,180,348	+		CCNA_03025	0.14	+0.0
3,180,356	-		CCNA_03025	0.15	+1.4
3,180,374	+		CCNA_03025	0.19	+1.9
3,180,401	+		CCNA_03025	0.24	+0.1
3,180,401	+		CCNA_03025	0.24	+0.4
3,180,401	+		CCNA_03025	0.24	-0.3
3,180,401	+		CCNA_03025	0.24	-0.5
3,180,409	-		CCNA_03025	0.26	-0.8
3,180,409	-		CCNA_03025	0.26	+0.1
3,180,409	-		CCNA_03025	0.26	+0.2
3,180,409	-		CCNA_03025	0.26	+1.4
3,180,409	-		CCNA_03025	0.26	-0.4
3,180,411	-		CCNA_03025	0.26	+1.0
3,180,411	-		CCNA_03025	0.26	+0.7
3,180,417	+		CCNA_03025	0.27	-1.6
3,180,424	-		CCNA_03025	0.29	-0.8
3,180,424	-		CCNA_03025	0.29	+1.4
3,180,528	+		CCNA_03025	0.49	+0.7
3,180,570	-		CCNA_03025	0.58	-0.7
3,180,582	+		CCNA_03025	0.60	-0.9
3,180,582	+		CCNA_03025	0.60	-0.5
3,180,616	-		CCNA_03025	0.67	+1.4
3,180,616	-		CCNA_03025	0.67	-1.0
3,180,678	-		CCNA_03025	0.79	+0.4
3,180,684	-		CCNA_03025	0.80	+0.6
3,180,752	+				+0.7
3,180,752	+				-1.2
3,180,785	+				-0.6
3,180,793	-				-1.1
3,180,793	-				-1.7
3,180,793	-				-2.5
3,180,793	-				-0.3
3,180,793	-				+0.9
3,180,848	-				-1.9
3,180,967	-		CCNA_03026	0.26	+0.6
3,181,082	-		CCNA_03026	0.43	-1.5
3,181,086	+		CCNA_03026	0.43	+0.2
3,181,092	-		CCNA_03026	0.44	+1.4
3,181,094	-		CCNA_03026	0.45	-2.2
3,181,164	-		CCNA_03026	0.55	+0.9
3,181,195	-		CCNA_03026	0.59	-2.4
3,181,196	+		CCNA_03026	0.59	-0.6
3,181,202	+		CCNA_03026	0.60	-0.6
3,181,203	-		CCNA_03026	0.60	-1.3
3,181,203	-		CCNA_03026	0.60	-0.1
3,181,210	-		CCNA_03026	0.61	+1.0
3,181,218	+		CCNA_03026	0.62	-2.0
3,181,231	-		CCNA_03026	0.64	-0.1
3,181,245	-		CCNA_03026	0.66	-0.7
3,181,274	+		CCNA_03026	0.70	-0.1
3,181,320	-		CCNA_03026	0.77	+0.4
3,181,349	-		CCNA_03026	0.81	+0.0
3,181,388	+		CCNA_03026	0.86	-0.6
3,181,391	+		CCNA_03026	0.87	+0.4
3,181,444	-				-0.9
3,181,452	+				-0.7
3,181,460	-				-0.3
3,181,498	+				-0.1
3,181,506	-				+0.1
3,181,529	-				-0.4
3,181,544	+				-0.2
3,181,550	-				+0.1
3,181,592	+				+1.0
3,181,600	-				+1.6
3,181,635	+				-0.7
3,181,643	-				-0.6
3,181,648	+				-0.3
3,181,648	+				+0.6
3,181,648	+				+0.8
3,181,651	-				+0.7
3,181,667	-				-0.4
3,181,675	+				+0.4
3,181,675	+				-1.8
3,181,756	+				+0.7
3,181,756	+				-0.8
3,181,764	-				+0.2
3,181,770	-				+0.2
3,181,781	+		CCNA_03027	0.10	-1.6
3,181,781	+		CCNA_03027	0.10	+0.3
3,181,781	+		CCNA_03027	0.10	+1.0
3,181,783	+		CCNA_03027	0.10	-0.2
3,181,787	+		CCNA_03027	0.11	-1.4
3,181,787	+		CCNA_03027	0.11	-1.0
3,181,792	+		CCNA_03027	0.11	-0.9
3,181,802	+		CCNA_03027	0.12	+1.7
3,181,816	+		CCNA_03027	0.13	-1.5
3,181,819	-		CCNA_03027	0.13	-0.0
3,181,824	-		CCNA_03027	0.13	-0.3
3,181,838	+		CCNA_03027	0.14	+2.2
3,181,841	-		CCNA_03027	0.15	-1.1
3,181,851	-		CCNA_03027	0.15	+0.2
3,181,851	-		CCNA_03027	0.15	+0.5
3,181,851	-		CCNA_03027	0.15	-1.2
3,181,851	-		CCNA_03027	0.15	+1.2
3,181,851	-		CCNA_03027	0.15	-0.8
3,181,851	-		CCNA_03027	0.15	+1.2
3,181,856	-		CCNA_03027	0.16	-1.5
3,181,866	-		CCNA_03027	0.17	-0.2
3,181,879	+		CCNA_03027	0.17	-1.7
3,181,887	-		CCNA_03027	0.18	-0.7
3,181,925	-		CCNA_03027	0.21	-1.6
3,181,931	+		CCNA_03027	0.21	-1.4
3,181,939	+		CCNA_03027	0.22	-0.4
3,181,981	+		CCNA_03027	0.25	-1.3
3,181,981	+		CCNA_03027	0.25	+3.2
3,181,981	+		CCNA_03027	0.25	+0.1
3,181,981	+		CCNA_03027	0.25	-1.8
3,181,981	+		CCNA_03027	0.25	-1.6
3,181,981	+		CCNA_03027	0.25	+0.6
3,181,981	+		CCNA_03027	0.25	-1.4
3,181,981	+		CCNA_03027	0.25	-1.4
3,181,989	-		CCNA_03027	0.26	+1.2
3,181,989	-		CCNA_03027	0.26	-0.5
3,181,989	-		CCNA_03027	0.26	-0.9
3,181,989	-		CCNA_03027	0.26	+1.2
3,181,989	-		CCNA_03027	0.26	+2.0
3,181,989	-		CCNA_03027	0.26	-1.7
3,181,989	-		CCNA_03027	0.26	-1.8
3,182,012	+		CCNA_03027	0.27	-0.2
3,182,105	+		CCNA_03027	0.34	-1.1
3,182,105	+		CCNA_03027	0.34	-1.7
3,182,106	-		CCNA_03027	0.34	+0.2
3,182,113	-		CCNA_03027	0.35	+1.0
3,182,113	-		CCNA_03027	0.35	-2.2
3,182,147	+		CCNA_03027	0.38	+0.2
3,182,155	-		CCNA_03027	0.38	+1.2
3,182,167	-		CCNA_03027	0.39	+0.9
3,182,174	-		CCNA_03027	0.40	-1.0
3,182,189	-		CCNA_03027	0.41	-0.7
3,182,225	-		CCNA_03027	0.43	+0.3
3,182,272	+		CCNA_03027	0.47	-0.7
3,182,317	+		CCNA_03027	0.50	-0.7
3,182,317	+		CCNA_03027	0.50	-1.3
3,182,317	+		CCNA_03027	0.50	-0.3
3,182,317	+		CCNA_03027	0.50	+1.1
3,182,325	-		CCNA_03027	0.51	+1.0
3,182,325	-		CCNA_03027	0.51	-2.1
3,182,352	+		CCNA_03027	0.53	-0.1
3,182,377	+		CCNA_03027	0.55	-1.5
3,182,382	+		CCNA_03027	0.55	+1.2
3,182,385	-		CCNA_03027	0.55	+0.1
3,182,385	-		CCNA_03027	0.55	-1.6
3,182,393	+		CCNA_03027	0.56	+0.2
3,182,393	+		CCNA_03027	0.56	+1.4
3,182,393	+		CCNA_03027	0.56	-0.6
3,182,393	+		CCNA_03027	0.56	-1.1
3,182,393	+		CCNA_03027	0.56	-0.4
3,182,401	-		CCNA_03027	0.57	-0.3
3,182,401	-		CCNA_03027	0.57	-0.9
3,182,401	-		CCNA_03027	0.57	-1.2
3,182,401	-		CCNA_03027	0.57	-0.4
3,182,401	-		CCNA_03027	0.57	-0.7
3,182,401	-		CCNA_03027	0.57	+0.2
3,182,401	-		CCNA_03027	0.57	-1.1
3,182,401	-		CCNA_03027	0.57	-0.5
3,182,410	+		CCNA_03027	0.57	-1.5
3,182,410	+		CCNA_03027	0.57	+2.0
3,182,418	-		CCNA_03027	0.58	+1.7
3,182,418	-		CCNA_03027	0.58	+0.1
3,182,418	-		CCNA_03027	0.58	+0.9
3,182,418	-		CCNA_03027	0.58	+0.9
3,182,451	-		CCNA_03027	0.60	-2.2
3,182,460	+		CCNA_03027	0.61	-1.5