Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02804

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,959,353	-				+0.5
2,959,391	+				+0.8
2,959,399	-				-0.4
2,959,399	-				-2.1
2,959,401	+				-0.0
2,959,419	+		CCNA_02802	0.14	-1.0
2,959,457	+		CCNA_02802	0.26	-1.1
2,959,471	+		CCNA_02802	0.31	-0.2
2,959,493	+		CCNA_02802	0.38	-0.7
2,959,506	-		CCNA_02802	0.42	-0.0
2,959,513	+		CCNA_02802	0.44	-1.1
2,959,516	-		CCNA_02802	0.45	-0.2
2,959,538	+		CCNA_02802	0.52	-1.0
2,959,552	+		CCNA_02802	0.57	-0.6
2,959,552	+		CCNA_02802	0.57	-0.7
2,959,552	+		CCNA_02802	0.57	-0.7
2,959,560	-		CCNA_02802	0.59	-1.4
2,959,583	-		CCNA_02802	0.67	+1.1
2,959,590	-		CCNA_02802	0.69	+0.4
2,959,593	+		CCNA_02802	0.70	+1.5
2,959,603	-		CCNA_02802	0.73	-0.2
2,959,609	+		CCNA_02802	0.75	+0.8
2,959,609	+		CCNA_02802	0.75	+0.3
2,959,609	+		CCNA_02802	0.75	-0.6
2,959,617	-		CCNA_02802	0.78	-1.5
2,959,649	-				+2.7
2,959,651	+		CCNA_02802	0.88	+2.0
2,959,681	+				+0.7
2,959,681	+				+0.2
2,959,731	-				+0.3
2,959,743	+				-0.5
2,959,751	-				+0.6
2,959,753	-				-0.5
2,959,757	+				+1.7
2,959,765	-				-2.1
2,959,765	-				-0.7
2,959,765	-				-1.2
2,959,824	+				-0.6
2,959,875	-				+0.3
2,959,881	+				+0.1
2,959,886	+				-0.6
2,959,887	+				-1.4
2,959,888	+				-0.9
2,959,889	-				-0.9
2,959,894	-				-2.3
2,959,894	-				+0.6
2,959,918	+				+0.7
2,959,946	+				-0.4
2,959,946	+				-0.6
2,959,946	+				-2.0
2,959,946	+				-0.0
2,959,946	+				+0.5
2,959,946	+				+0.4
2,959,946	+				+0.7
2,959,946	+				-2.0
2,959,946	+				+2.1
2,959,953	+				-1.0
2,959,953	+				-1.3
2,959,954	-				-0.8
2,959,954	-				+2.0
2,959,954	-				+0.9
2,959,954	-				-0.0
2,959,954	-				-1.2
2,959,954	-				-1.1
2,959,954	-				+1.0
2,959,954	-				-0.8
2,959,954	-				+1.0
2,959,967	-				-2.4
2,960,004	+		CCNA_03977	0.16	+0.4
2,960,015	-		CCNA_03977	0.20	-1.4
2,960,055	+		CCNA_03977	0.35	-0.4
2,960,089	+		CCNA_03977	0.48	+0.2
2,960,090	-		CCNA_03977	0.49	-0.1
2,960,094	+		CCNA_03977	0.50	+1.1
2,960,096	-		CCNA_03977	0.51	+1.7
2,960,097	-		CCNA_03977	0.51	-0.2
2,960,120	+		CCNA_03977	0.60	+1.2
2,960,120	+		CCNA_03977	0.60	+0.4
2,960,130	+		CCNA_03977	0.64	+0.7
2,960,138	-		CCNA_03977	0.67	-0.2
2,960,138	-		CCNA_03977	0.67	+0.6
2,960,154	+		CCNA_03977	0.73	-0.0
2,960,154	+		CCNA_03977	0.73	+0.8
2,960,177	+		CCNA_03977	0.82	-0.5
2,960,246	+				+0.8
2,960,285	+				-0.3
2,960,344	-				-0.6
2,960,351	+				+1.1
2,960,371	+		CCNA_02804	0.13	-0.7
2,960,371	+		CCNA_02804	0.13	+0.1
2,960,371	+		CCNA_02804	0.13	+0.9
2,960,376	+		CCNA_02804	0.16	+1.9
2,960,376	+		CCNA_02804	0.16	+0.3
2,960,376	+		CCNA_02804	0.16	-1.1
2,960,376	+		CCNA_02804	0.16	+0.1
2,960,379	-				+2.7
2,960,379	-		CCNA_02804	0.17	-2.0
2,960,379	-		CCNA_02804	0.17	+2.0
2,960,384	-		CCNA_02804	0.20	-0.7
2,960,386	+		CCNA_02804	0.21	-0.9
2,960,405	-		CCNA_02804	0.30	-1.6
2,960,410	+		CCNA_02804	0.33	-1.8
2,960,413	-		CCNA_02804	0.34	-0.6
2,960,480	+		CCNA_02804	0.68	-0.1
2,960,483	+		CCNA_02804	0.69	+1.7
2,960,491	-		CCNA_02804	0.73	-0.9
2,960,493	-		CCNA_02804	0.74	+0.3
2,960,523	-		CCNA_02804	0.89	-0.6
2,960,555	+				-0.3
2,960,555	+				-0.1
2,960,575	+				+1.5
2,960,609	-				-0.7
2,960,631	-				-0.2
2,960,676	+		CCNA_02805	0.20	+0.8
2,960,684	-		CCNA_02805	0.22	-0.4
2,960,764	-		CCNA_02805	0.41	-0.1
2,960,776	+		CCNA_02805	0.44	+0.5
2,960,776	+		CCNA_02805	0.44	+1.2
2,960,815	-		CCNA_02805	0.54	+1.1
2,960,862	+		CCNA_02805	0.65	+0.7
2,960,902	+		CCNA_02805	0.75	+1.4
2,960,918	+		CCNA_02805	0.79	+1.3
2,960,918	+		CCNA_02805	0.79	+1.4
2,960,926	-		CCNA_02805	0.81	-0.7
2,960,972	-				+0.8
2,960,977	-				-1.6
2,961,100	+				+0.7
2,961,100	+				-0.9
2,961,100	+				+0.5
2,961,100	+				+0.2
2,961,100	+				+0.1
2,961,100	+				-0.9
2,961,100	+				+0.4
2,961,100	+				+1.0
2,961,100	+				-0.5
2,961,100	+				-2.2
2,961,100	+				-1.5
2,961,100	+				+0.6
2,961,100	+				-0.5
2,961,100	+				+1.9
2,961,100	+				-0.0
2,961,108	-				+0.8
2,961,108	-				+0.9
2,961,108	-				-0.3
2,961,108	-				-0.8
2,961,108	-				+0.0
2,961,108	-				-0.9
2,961,108	-				-1.6
2,961,108	-				+0.1
2,961,110	+				-1.4
2,961,159	+				-0.4
2,961,177	+				+0.7
2,961,179	+				+0.2
2,961,201	-		CCNA_02806	0.11	-0.7
2,961,216	-		CCNA_02806	0.13	-1.5
2,961,217	+		CCNA_02806	0.13	+0.7
2,961,217	+		CCNA_02806	0.13	+1.4
2,961,217	+		CCNA_02806	0.13	+1.7
2,961,217	+		CCNA_02806	0.13	+0.9
2,961,217	+		CCNA_02806	0.13	+0.6
2,961,217	+		CCNA_02806	0.13	+0.8
2,961,220	-		CCNA_02806	0.13	-0.2
2,961,225	-		CCNA_02806	0.13	+0.6
2,961,225	-		CCNA_02806	0.13	+0.3
2,961,229	+		CCNA_02806	0.14	-0.4
2,961,235	-		CCNA_02806	0.14	-1.3
2,961,367	-		CCNA_02806	0.25	+0.7
2,961,400	+		CCNA_02806	0.27	-0.7
2,961,481	+		CCNA_02806	0.34	+0.3
2,961,525	-		CCNA_02806	0.37	+3.3