Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02648

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,801,243	-		CCNA_02647	0.48	+1.5
2,801,260	+				+2.4
2,801,266	+		CCNA_02647	0.50	-1.1
2,801,268	-		CCNA_02647	0.51	-1.6
2,801,268	-		CCNA_02647	0.51	-0.3
2,801,268	-		CCNA_02647	0.51	+0.0
2,801,268	-		CCNA_02647	0.51	+2.0
2,801,301	+		CCNA_02647	0.54	-1.2
2,801,309	-		CCNA_02647	0.55	-0.8
2,801,310	+		CCNA_02647	0.55	+1.4
2,801,315	-		CCNA_02647	0.56	+0.1
2,801,323	+		CCNA_02647	0.57	+1.7
2,801,340	-		CCNA_02647	0.58	+0.0
2,801,356	+		CCNA_02647	0.60	+1.7
2,801,393	-		CCNA_02647	0.64	+1.3
2,801,395	-		CCNA_02647	0.64	-0.2
2,801,414	-		CCNA_02647	0.66	-1.6
2,801,432	+		CCNA_02647	0.68	-1.0
2,801,468	+				+3.0
2,801,470	-		CCNA_02647	0.73	-1.8
2,801,475	-		CCNA_02647	0.73	-1.3
2,801,494	+		CCNA_02647	0.75	-1.2
2,801,518	+		CCNA_02647	0.78	-0.4
2,801,555	-		CCNA_02647	0.82	-1.6
2,801,555	-		CCNA_02647	0.82	+1.3
2,801,580	+		CCNA_02647	0.84	-0.4
2,801,585	+		CCNA_02647	0.85	-1.6
2,801,610	-		CCNA_02647	0.88	-1.1
2,801,641	+				-0.2
2,801,684	+				-1.0
2,801,692	-				-0.5
2,801,770	-				-0.4
2,801,806	+				-1.2
2,801,807	+				+0.1
2,801,807	+				-0.2
2,801,814	-				-0.1
2,801,815	+				+0.2
2,801,838	+				+0.0
2,801,838	+				+0.9
2,801,846	-				-0.2
2,801,846	-				-0.7
2,801,867	-				-0.6
2,801,902	-				+1.4
2,801,925	-				-1.0
2,801,941	+				+1.0
2,801,949	-				-0.3
2,801,971	+				-0.7
2,801,984	+				+0.4
2,801,984	+				+0.4
2,801,984	+				-0.1
2,801,984	+				+0.4
2,801,989	+				-0.6
2,801,989	+				-0.8
2,801,989	+				+0.1
2,801,989	+				-0.4
2,801,992	-				+0.7
2,801,992	-				-0.8
2,801,997	-				+0.0
2,801,997	-				-0.3
2,801,997	-				-0.5
2,801,997	-				-2.1
2,801,997	-				+0.4
2,801,997	-				-1.0
2,801,997	-				-0.4
2,801,997	-				+0.4
2,802,034	-				+0.9
2,802,040	+				-0.5
2,802,064	+				+0.9
2,802,064	+				-0.2
2,802,064	+				+0.4
2,802,094	+				+1.2
2,802,149	-				-1.4
2,802,182	-				+0.8
2,802,187	-				-1.2
2,802,189	+				+1.3
2,802,189	+				-1.7
2,802,207	-				-0.7
2,802,219	-				-1.3
2,802,275	-				-0.8
2,802,312	-				+0.3
2,802,312	-				+0.1
2,802,326	+		CCNA_02648	0.10	+2.2
2,802,361	+		CCNA_02648	0.14	-1.5
2,802,413	-		CCNA_02648	0.20	-0.6
2,802,448	-		CCNA_02648	0.23	-1.3
2,802,485	+		CCNA_02648	0.27	-0.7
2,802,485	+		CCNA_02648	0.27	-0.4
2,802,493	-		CCNA_02648	0.28	-1.2
2,802,504	+		CCNA_02648	0.30	+0.7
2,802,550	+		CCNA_02648	0.35	+0.3
2,802,581	-		CCNA_02648	0.38	+0.9
2,802,586	-		CCNA_02648	0.38	-0.7
2,802,625	+		CCNA_02648	0.43	-0.8
2,802,679	+		CCNA_02648	0.49	+0.3
2,802,715	+		CCNA_02648	0.52	-0.4
2,802,717	+		CCNA_02648	0.53	-0.5
2,802,717	+		CCNA_02648	0.53	+0.1
2,802,735	+		CCNA_02648	0.55	-0.1
2,802,772	+		CCNA_02648	0.59	-0.1
2,802,782	+		CCNA_02648	0.60	-1.4
2,802,885	-		CCNA_02648	0.71	+0.6
2,802,887	+		CCNA_02648	0.71	+0.7
2,802,926	-		CCNA_02648	0.75	-0.6
2,802,926	-		CCNA_02648	0.75	-2.2
2,802,991	-		CCNA_02648	0.82	-1.2
2,803,020	+		CCNA_02648	0.86	+0.0
2,803,063	+				+0.8
2,803,076	+				-1.4
2,803,084	-				-1.4
2,803,143	-				+0.4
2,803,154	-				+0.6
2,803,210	-				-1.9
2,803,226	+				-0.6
2,803,257	+		CCNA_02649	0.13	-1.4
2,803,271	-		CCNA_02649	0.15	-0.9
2,803,374	+		CCNA_02649	0.32	-0.1
2,803,382	-		CCNA_02649	0.33	-0.4
2,803,382	-		CCNA_02649	0.33	+0.3
2,803,414	-		CCNA_02649	0.39	-0.0
2,803,478	-		CCNA_02649	0.49	-0.8
2,803,510	+		CCNA_02649	0.54	-1.8
2,803,512	-		CCNA_02649	0.55	-0.2
2,803,520	+		CCNA_02649	0.56	-0.1
2,803,520	+		CCNA_02649	0.56	-2.1
2,803,621	+		CCNA_02649	0.72	-1.8
2,803,722	+		CCNA_02649	0.89	-0.3
2,803,723	-		CCNA_02649	0.89	-0.3
2,803,742	+				-0.1
2,803,742	+				+1.7
2,803,747	+				-1.3
2,803,750	-				+1.4
2,803,859	-				-0.9
2,803,936	+		CCNA_02650	0.20	+0.0
2,803,936	+		CCNA_02650	0.20	+0.6
2,803,944	-		CCNA_02650	0.21	-1.6
2,803,944	-		CCNA_02650	0.21	+1.2
2,803,944	-		CCNA_02650	0.21	-0.1
2,803,944	-		CCNA_02650	0.21	+1.9
2,803,988	+		CCNA_02650	0.27	-0.5
2,803,994	+		CCNA_02650	0.28	-0.8
2,804,048	-		CCNA_02650	0.36	-0.7
2,804,127	+		CCNA_02650	0.46	+1.0