Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02441

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,581,631	+		CCNA_02440	0.41	-1.1
2,581,631	+		CCNA_02440	0.41	+0.9
2,581,633	+		CCNA_02440	0.41	+0.6
2,581,639	-		CCNA_02440	0.41	+0.3
2,581,667	-		CCNA_02440	0.44	-0.3
2,581,667	-		CCNA_02440	0.44	-0.3
2,581,667	-		CCNA_02440	0.44	-1.7
2,581,718	+		CCNA_02440	0.49	-0.9
2,581,726	-		CCNA_02440	0.50	-0.5
2,581,730	-		CCNA_02440	0.50	+0.9
2,581,755	+		CCNA_02440	0.53	+0.5
2,581,769	+		CCNA_02440	0.54	-1.4
2,581,835	+		CCNA_02440	0.60	+0.7
2,581,843	-		CCNA_02440	0.61	+1.2
2,581,844	-		CCNA_02440	0.61	-0.4
2,581,870	+		CCNA_02440	0.64	+0.4
2,581,870	+		CCNA_02440	0.64	+1.0
2,581,873	+		CCNA_02440	0.64	+0.3
2,581,873	+		CCNA_02440	0.64	-1.0
2,581,882	+		CCNA_02440	0.65	+1.9
2,581,886	+		CCNA_02440	0.65	-1.0
2,582,024	+		CCNA_02440	0.78	+1.6
2,582,026	-		CCNA_02440	0.79	+1.4
2,582,032	-		CCNA_02440	0.79	-0.5
2,582,128	-		CCNA_02440	0.88	+1.0
2,582,155	-				+0.3
2,582,242	+				-1.5
2,582,242	+				-0.7
2,582,242	+				-0.4
2,582,242	+				+1.2
2,582,250	-				-1.7
2,582,250	-				-1.0
2,582,272	+				-1.1
2,582,280	-				+0.2
2,582,280	-				+0.4
2,582,280	-				-0.1
2,582,307	+				-0.4
2,582,318	+				+0.1
2,582,326	-				-0.3
2,582,337	+				-0.4
2,582,339	-				+0.2
2,582,339	-				+1.9
2,582,345	-				+0.1
2,582,345	-				-1.7
2,582,345	-				-0.1
2,582,394	+				-1.0
2,582,402	-				-0.8
2,582,404	+				+0.4
2,582,407	-				+0.3
2,582,407	-				+0.3
2,582,419	+				+1.0
2,582,440	+				+0.3
2,582,468	-				+0.3
2,582,487	-				-1.6
2,582,488	+				-0.0
2,582,507	+				+0.3
2,582,519	+				-0.6
2,582,527	-				-0.3
2,582,632	+		CCNA_02441	0.29	-0.5
2,582,636	-		CCNA_02441	0.31	-1.5
2,582,640	+		CCNA_02441	0.34	-0.6
2,582,655	+		CCNA_02441	0.43	-0.4
2,582,681	-		CCNA_02441	0.60	-2.1
2,582,736	-				-1.1
2,582,746	-				-0.4
2,582,755	+				+2.2
2,582,755	+				+0.3
2,582,755	+				+0.9
2,582,763	-				-1.1
2,582,763	-				-0.5
2,582,763	-				-0.8
2,582,763	-				+0.7
2,582,763	-				-1.0
2,582,763	-				-1.6
2,582,763	-				-0.0
2,582,763	-				-0.0
2,582,785	-				+0.6
2,582,827	+				-1.6
2,582,835	+				+1.0
2,582,843	-				-0.6
2,582,877	-				-1.5
2,582,877	-				-0.8
2,582,890	+				+0.5
2,582,916	-		CCNA_02442	0.11	-0.1
2,582,998	-		CCNA_02442	0.16	+1.6
2,583,016	+		CCNA_02442	0.17	-0.2
2,583,016	+		CCNA_02442	0.17	+0.3
2,583,043	+		CCNA_02442	0.19	-1.9
2,583,050	+		CCNA_02442	0.19	-1.2
2,583,050	+		CCNA_02442	0.19	-1.0
2,583,077	-		CCNA_02442	0.21	-1.3
2,583,113	-		CCNA_02442	0.24	-0.3
2,583,139	+		CCNA_02442	0.25	+0.2
2,583,139	+		CCNA_02442	0.25	+1.0
2,583,147	-		CCNA_02442	0.26	-0.2
2,583,157	+		CCNA_02442	0.27	-1.2
2,583,157	+		CCNA_02442	0.27	+0.6
2,583,157	+		CCNA_02442	0.27	-0.2
2,583,170	-		CCNA_02442	0.27	+0.5
2,583,175	-		CCNA_02442	0.28	+2.4
2,583,213	-		CCNA_02442	0.30	-1.3
2,583,250	-		CCNA_02442	0.33	+0.4
2,583,293	+		CCNA_02442	0.36	+0.3
2,583,313	+		CCNA_02442	0.37	+2.0
2,583,319	+		CCNA_02442	0.37	-1.4
2,583,319	+		CCNA_02442	0.37	-2.1
2,583,321	-		CCNA_02442	0.38	+0.3
2,583,339	-		CCNA_02442	0.39	-0.7
2,583,340	-		CCNA_02442	0.39	-1.1
2,583,366	-		CCNA_02442	0.41	-1.2
2,583,381	+		CCNA_02442	0.42	+0.1
2,583,381	+		CCNA_02442	0.42	-0.6
2,583,381	+		CCNA_02442	0.42	+0.8
2,583,389	-		CCNA_02442	0.42	+0.2
2,583,401	+		CCNA_02442	0.43	-1.3
2,583,401	+				+1.8
2,583,409	-		CCNA_02442	0.43	+1.4
2,583,409	-		CCNA_02442	0.43	+1.4
2,583,409	-		CCNA_02442	0.43	-0.1
2,583,409	-		CCNA_02442	0.43	-0.5
2,583,432	-		CCNA_02442	0.45	+0.3
2,583,435	-		CCNA_02442	0.45	+1.3
2,583,447	-		CCNA_02442	0.46	-1.1
2,583,465	-		CCNA_02442	0.47	-0.8
2,583,465	-		CCNA_02442	0.47	+2.8
2,583,465	-		CCNA_02442	0.47	-1.3
2,583,526	-		CCNA_02442	0.51	+0.8
2,583,573	-		CCNA_02442	0.54	-0.2
2,583,619	+		CCNA_02442	0.57	-1.3
2,583,627	+		CCNA_02442	0.58	+0.5
2,583,635	-		CCNA_02442	0.58	-0.8
2,583,682	-		CCNA_02442	0.62	-0.4
2,583,682	-		CCNA_02442	0.62	-1.2
2,583,710	+		CCNA_02442	0.63	+2.3