Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02415

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,558,469	-		CCNA_02414	0.27	+1.6
2,558,481	-		CCNA_02414	0.28	+0.6
2,558,494	+		CCNA_02414	0.30	+1.2
2,558,542	+		CCNA_02414	0.34	+0.7
2,558,550	-		CCNA_02414	0.35	+0.3
2,558,555	-		CCNA_02414	0.36	+1.7
2,558,557	+		CCNA_02414	0.36	+0.9
2,558,641	+		CCNA_02414	0.44	+0.5
2,558,651	+		CCNA_02414	0.45	-1.1
2,558,686	+		CCNA_02414	0.49	+1.2
2,558,707	+		CCNA_02414	0.51	+3.2
2,558,747	+		CCNA_02414	0.55	+1.0
2,558,753	+		CCNA_02414	0.55	+1.6
2,558,771	-		CCNA_02414	0.57	+1.6
2,558,783	-		CCNA_02414	0.58	+2.9
2,558,803	-		CCNA_02414	0.60	+1.8
2,558,805	+		CCNA_02414	0.60	-0.1
2,558,832	+		CCNA_02414	0.63	+1.3
2,558,832	+		CCNA_02414	0.63	+0.5
2,558,840	-		CCNA_02414	0.64	+1.1
2,558,840	-		CCNA_02414	0.64	+1.1
2,558,840	-		CCNA_02414	0.64	+1.8
2,558,874	+		CCNA_02414	0.67	-0.0
2,558,916	-		CCNA_02414	0.71	+1.1
2,558,952	-		CCNA_02414	0.75	+1.7
2,558,952	-		CCNA_02414	0.75	+2.3
2,558,963	+		CCNA_02414	0.76	-0.5
2,559,034	+		CCNA_02414	0.83	+1.5
2,559,078	-		CCNA_02414	0.87	-0.7
2,559,117	-				+1.5
2,559,123	-				+2.1
2,559,137	+				+0.3
2,559,138	-				+1.9
2,559,155	+				+0.3
2,559,202	+				-0.2
2,559,222	+				+2.2
2,559,222	+				+0.4
2,559,222	+				+0.1
2,559,222	+				-0.1
2,559,222	+				+0.3
2,559,222	+				+1.0
2,559,222	+				-0.7
2,559,222	+				-0.1
2,559,222	+				+2.6
2,559,222	+				+0.4
2,559,222	+				+0.7
2,559,222	+				+0.5
2,559,222	+				+1.6
2,559,223	-				-2.4
2,559,223	-				-1.8
2,559,230	-				-1.1
2,559,230	-				-0.8
2,559,230	-				-1.0
2,559,230	-				-2.2
2,559,230	-				+1.4
2,559,230	-				+0.6
2,559,230	-				-0.3
2,559,230	-				-0.1
2,559,230	-				-0.9
2,559,230	-				+0.1
2,559,230	-				-1.1
2,559,230	-				-0.5
2,559,230	-				-1.1
2,559,230	-				+1.2
2,559,230	-				-1.3
2,559,230	-				-0.0
2,559,230	-				-1.3
2,559,240	-				+2.0
2,559,253	-				-0.7
2,559,272	-				+0.4
2,559,313	-				+0.3
2,559,327	+				-0.2
2,559,335	-				-1.2
2,559,362	+				+0.8
2,559,441	-				+0.5
2,559,469	-		CCNA_02415	0.12	+0.5
2,559,506	-		CCNA_02415	0.21	+0.6
2,559,507	+		CCNA_02415	0.21	+0.4
2,559,507	+		CCNA_02415	0.21	-1.0
2,559,507	+		CCNA_02415	0.21	-1.1
2,559,507	+		CCNA_02415	0.21	+0.1
2,559,507	+		CCNA_02415	0.21	+0.5
2,559,515	-		CCNA_02415	0.23	+0.7
2,559,515	-		CCNA_02415	0.23	-2.4
2,559,515	-		CCNA_02415	0.23	-1.6
2,559,515	-		CCNA_02415	0.23	+0.9
2,559,515	-		CCNA_02415	0.23	-1.8
2,559,515	-		CCNA_02415	0.23	+0.9
2,559,539	+		CCNA_02415	0.29	-1.0
2,559,554	-		CCNA_02415	0.32	+1.0
2,559,601	+		CCNA_02415	0.44	+0.9
2,559,601	+		CCNA_02415	0.44	-0.3
2,559,601	+		CCNA_02415	0.44	-0.9
2,559,622	+		CCNA_02415	0.49	+1.2
2,559,664	-		CCNA_02415	0.59	+0.0
2,559,680	+		CCNA_02415	0.63	-1.4
2,559,688	-		CCNA_02415	0.65	-0.1
2,559,697	+		CCNA_02415	0.67	-3.2
2,559,697	+		CCNA_02415	0.67	-1.2
2,559,697	+		CCNA_02415	0.67	-0.9
2,559,697	+		CCNA_02415	0.67	-1.6
2,559,697	+		CCNA_02415	0.67	-0.9
2,559,697	+		CCNA_02415	0.67	-2.1
2,559,697	+		CCNA_02415	0.67	-0.3
2,559,697	+		CCNA_02415	0.67	-0.5
2,559,697	+		CCNA_02415	0.67	-2.8
2,559,705	-		CCNA_02415	0.69	+1.6
2,559,705	-		CCNA_02415	0.69	-0.3
2,559,705	-		CCNA_02415	0.69	+0.7
2,559,705	-		CCNA_02415	0.69	+0.0
2,559,705	-		CCNA_02415	0.69	-1.0
2,559,737	-		CCNA_02415	0.77	-0.5
2,559,739	+		CCNA_02415	0.78	-2.2
2,559,747	-		CCNA_02415	0.80	-0.4
2,559,795	-				+0.1
2,559,843	-				-1.4
2,559,843	-				+0.9
2,559,934	+				-0.1
2,559,934	+				-1.9
2,559,942	-				+0.3
2,559,942	-				+1.3
2,559,942	-				-0.9
2,559,942	-				-0.3
2,559,956	+				-0.3
2,559,958	+				+0.7
2,559,958	+				-0.6
2,559,958	+				-0.4
2,559,961	+				-0.6
2,559,966	-				-0.9
2,559,979	+				-0.3
2,560,104	-				+1.2
2,560,112	-				-0.6
2,560,127	-				+2.6
2,560,153	+				-1.2
2,560,198	+		CCNA_02416	0.22	+0.0
2,560,198	+		CCNA_02416	0.22	-0.2
2,560,198	+		CCNA_02416	0.22	+1.2
2,560,198	+		CCNA_02416	0.22	-1.4
2,560,198	+		CCNA_02416	0.22	+1.2
2,560,198	+		CCNA_02416	0.22	+0.0
2,560,206	-		CCNA_02416	0.25	+0.9
2,560,244	+		CCNA_02416	0.39	-0.3
2,560,285	+		CCNA_02416	0.53	+0.9
2,560,293	-		CCNA_02416	0.56	+0.3
2,560,297	+		CCNA_02416	0.58	-0.1
2,560,299	-		CCNA_02416	0.58	-0.1
2,560,304	-		CCNA_02416	0.60	+0.3
2,560,306	+		CCNA_02416	0.61	+2.5
2,560,306	+		CCNA_02416	0.61	+1.7
2,560,325	-		CCNA_02416	0.68	+2.2
2,560,371	+		CCNA_02416	0.84	+0.3
2,560,381	+		CCNA_02416	0.88	+0.8
2,560,416	-				-0.1
2,560,474	+				+0.6
2,560,502	-				+1.5
2,560,612	+				-1.1
2,560,627	-				+4.8
2,560,632	+				-0.2
2,560,656	+				+2.9
2,560,664	-		CCNA_02417	0.10	+0.3
2,560,673	+		CCNA_02417	0.11	+1.1
2,560,681	-		CCNA_02417	0.12	-0.5
2,560,682	-		CCNA_02417	0.12	-1.7
2,560,714	+		CCNA_02417	0.14	-1.6
2,560,724	+		CCNA_02417	0.15	+0.6
2,560,724	+		CCNA_02417	0.15	-0.3
2,560,745	+		CCNA_02417	0.17	-1.3
2,560,772	-		CCNA_02417	0.19	+0.1