Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02386

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,528,521	-		CCNA_02385	0.37	+0.5
2,528,589	+		CCNA_02385	0.42	-0.8
2,528,592	-		CCNA_02385	0.42	+0.0
2,528,599	+		CCNA_02385	0.43	+2.6
2,528,653	-		CCNA_02385	0.47	-0.2
2,528,653	-		CCNA_02385	0.47	-0.1
2,528,653	-		CCNA_02385	0.47	-0.1
2,528,653	-		CCNA_02385	0.47	+0.4
2,528,672	-		CCNA_02385	0.48	-0.2
2,528,703	-		CCNA_02385	0.50	+3.8
2,528,710	+		CCNA_02385	0.51	-1.2
2,528,718	-		CCNA_02385	0.51	-0.2
2,528,753	+		CCNA_02385	0.54	-0.9
2,528,758	+		CCNA_02385	0.54	-1.5
2,528,761	-		CCNA_02385	0.54	-2.8
2,528,761	-		CCNA_02385	0.54	-0.2
2,528,761	-		CCNA_02385	0.54	-1.6
2,528,761	-		CCNA_02385	0.54	-0.6
2,528,763	+		CCNA_02385	0.55	-1.5
2,528,764	+		CCNA_02385	0.55	+2.6
2,528,774	+		CCNA_02385	0.55	-0.2
2,528,774	+		CCNA_02385	0.55	+0.6
2,528,829	+		CCNA_02385	0.59	+0.9
2,528,829	+		CCNA_02385	0.59	-0.9
2,528,830	-		CCNA_02385	0.59	-2.2
2,528,830	-		CCNA_02385	0.59	+0.3
2,528,830	-		CCNA_02385	0.59	+1.8
2,528,830	-		CCNA_02385	0.59	+2.2
2,528,842	-		CCNA_02385	0.60	+0.4
2,528,849	-		CCNA_02385	0.61	-1.5
2,528,849	-		CCNA_02385	0.61	+1.6
2,528,851	+		CCNA_02385	0.61	-0.1
2,528,851	+		CCNA_02385	0.61	-1.6
2,528,873	-		CCNA_02385	0.63	-0.7
2,528,888	+		CCNA_02385	0.64	-1.6
2,528,908	+		CCNA_02385	0.65	-1.5
2,528,938	-				+4.8
2,528,938	-		CCNA_02385	0.67	+2.9
2,528,957	+		CCNA_02385	0.69	+1.9
2,528,965	-		CCNA_02385	0.69	-1.4
2,529,014	-		CCNA_02385	0.73	-0.5
2,529,014	-		CCNA_02385	0.73	-0.9
2,529,077	-		CCNA_02385	0.77	+2.2
2,529,098	+		CCNA_02385	0.79	+0.3
2,529,098	+		CCNA_02385	0.79	-1.2
2,529,098	+		CCNA_02385	0.79	-0.2
2,529,100	-		CCNA_02385	0.79	-0.9
2,529,106	-		CCNA_02385	0.79	+1.2
2,529,106	-		CCNA_02385	0.79	+0.3
2,529,106	-		CCNA_02385	0.79	-1.1
2,529,106	-		CCNA_02385	0.79	-0.2
2,529,106	-		CCNA_02385	0.79	+0.4
2,529,116	+		CCNA_02385	0.80	+0.7
2,529,121	+				+1.4
2,529,143	+		CCNA_02385	0.82	-0.5
2,529,151	-		CCNA_02385	0.83	-1.1
2,529,161	-		CCNA_02385	0.83	+0.7
2,529,163	+		CCNA_02385	0.84	+0.9
2,529,163	+		CCNA_02385	0.84	-0.4
2,529,171	-		CCNA_02385	0.84	+0.9
2,529,171	-		CCNA_02385	0.84	-0.0
2,529,209	+		CCNA_02385	0.87	+1.0
2,529,209	+		CCNA_02385	0.87	+0.7
2,529,211	-		CCNA_02385	0.87	-1.3
2,529,286	+				+0.6
2,529,287	+				-1.2
2,529,288	-				+1.2
2,529,301	+				-0.8
2,529,309	+				-0.1
2,529,356	-				+1.4
2,529,384	+				-0.5
2,529,389	+				+1.1
2,529,584	-				-1.7
2,529,725	+		CCNA_02386	0.18	+1.2
2,529,730	-		CCNA_02386	0.19	+0.1
2,529,739	-		CCNA_02386	0.19	-1.4
2,529,743	+		CCNA_02386	0.20	+0.2
2,529,746	-		CCNA_02386	0.20	-0.1
2,529,748	+		CCNA_02386	0.20	-0.3
2,529,751	-		CCNA_02386	0.20	+1.0
2,529,756	-		CCNA_02386	0.21	+0.6
2,529,797	-		CCNA_02386	0.24	-2.8
2,529,804	-		CCNA_02386	0.25	-0.6
2,529,907	-		CCNA_02386	0.33	-2.4
2,529,907	-		CCNA_02386	0.33	-0.3
2,529,921	+		CCNA_02386	0.34	-0.4
2,529,929	-		CCNA_02386	0.35	-0.5
2,529,929	-		CCNA_02386	0.35	-0.2
2,529,929	-		CCNA_02386	0.35	-1.7
2,529,935	+		CCNA_02386	0.35	+1.2
2,529,943	-		CCNA_02386	0.36	-1.0
2,529,943	-		CCNA_02386	0.36	-1.2
2,529,943	-		CCNA_02386	0.36	-1.4
2,529,943	-		CCNA_02386	0.36	-1.1
2,529,959	+		CCNA_02386	0.37	+1.2
2,529,959	+		CCNA_02386	0.37	-0.7
2,529,969	-		CCNA_02386	0.38	-0.5
2,529,969	-		CCNA_02386	0.38	-1.3
2,529,977	-		CCNA_02386	0.39	+3.2
2,529,992	-		CCNA_02386	0.40	-1.2
2,530,056	-		CCNA_02386	0.45	-1.7
2,530,078	+		CCNA_02386	0.47	-0.6
2,530,158	+		CCNA_02386	0.54	+0.2
2,530,211	+		CCNA_02386	0.58	-0.1
2,530,219	-		CCNA_02386	0.59	-1.4
2,530,245	-		CCNA_02386	0.61	-1.7
2,530,256	-		CCNA_02386	0.62	-4.0
2,530,266	-		CCNA_02386	0.62	-1.3
2,530,280	+		CCNA_02386	0.64	-1.1
2,530,319	-		CCNA_02386	0.67	-2.1
2,530,319	-		CCNA_02386	0.67	-0.7
2,530,343	-		CCNA_02386	0.69	-0.3
2,530,343	-		CCNA_02386	0.69	-1.8
2,530,343	-		CCNA_02386	0.69	-0.1
2,530,343	-		CCNA_02386	0.69	-0.1
2,530,397	+		CCNA_02386	0.73	-0.3
2,530,426	+		CCNA_02386	0.75	-0.3
2,530,433	-		CCNA_02386	0.76	+0.9
2,530,433	-		CCNA_02386	0.76	-1.1
2,530,441	-		CCNA_02386	0.77	-0.2
2,530,459	-		CCNA_02386	0.78	-1.1
2,530,468	-		CCNA_02386	0.79	-2.1
2,530,468	-		CCNA_02386	0.79	-0.1
2,530,534	-		CCNA_02386	0.84	-2.1
2,530,547	+		CCNA_02386	0.85	+0.2
2,530,550	-		CCNA_02386	0.86	-2.6
2,530,559	+		CCNA_02386	0.86	+2.2
2,530,565	-		CCNA_02386	0.87	-2.1
2,530,583	-		CCNA_02386	0.88	+0.2
2,530,614	+				+1.0
2,530,614	+				-1.1
2,530,622	-				-3.0
2,530,637	-				-2.9
2,530,686	+				+1.0
2,530,694	+				+1.4
2,530,750	+				-0.7
2,530,777	+				+1.0
2,530,788	+				+0.3
2,530,877	+		CCNA_02387	0.11	-0.9
2,530,928	+		CCNA_02387	0.15	+1.2
2,530,947	-		CCNA_02387	0.16	+1.1
2,531,001	+		CCNA_02387	0.20	+0.3
2,531,009	-		CCNA_02387	0.20	+1.2
2,531,041	+		CCNA_02387	0.23	+0.4
2,531,049	-		CCNA_02387	0.23	+2.1
2,531,049	-		CCNA_02387	0.23	+1.2
2,531,051	-		CCNA_02387	0.23	+1.3
2,531,053	+		CCNA_02387	0.24	-0.2
2,531,136	+		CCNA_02387	0.30	+1.0
2,531,203	+		CCNA_02387	0.34	+0.5
2,531,211	-		CCNA_02387	0.35	+2.3
2,531,211	-		CCNA_02387	0.35	+4.3
2,531,226	-		CCNA_02387	0.36	+1.4
2,531,254	+				+4.2
2,531,262	-		CCNA_02387	0.39	+1.2
2,531,275	-		CCNA_02387	0.39	+1.0
2,531,288	+		CCNA_02387	0.40	+0.8
2,531,357	-		CCNA_02387	0.45	+0.9
2,531,359	+		CCNA_02387	0.45	+0.8
2,531,411	-		CCNA_02387	0.49	+1.3
2,531,418	+		CCNA_02387	0.50	-0.2
2,531,418	+		CCNA_02387	0.50	+0.2
2,531,426	-		CCNA_02387	0.50	+1.2
2,531,426	-		CCNA_02387	0.50	+0.3
2,531,426	-		CCNA_02387	0.50	+1.0
2,531,426	-		CCNA_02387	0.50	+1.5
2,531,429	+		CCNA_02387	0.50	+0.9
2,531,437	-		CCNA_02387	0.51	+1.7
2,531,437	-		CCNA_02387	0.51	+1.4
2,531,523	+		CCNA_02387	0.57	+0.7
2,531,550	-		CCNA_02387	0.59	+0.5
2,531,550	-		CCNA_02387	0.59	+1.5
2,531,576	-		CCNA_02387	0.61	+1.1
2,531,596	+		CCNA_02387	0.62	-0.5
2,531,604	-		CCNA_02387	0.63	+1.3
2,531,604	-		CCNA_02387	0.63	+1.7
2,531,604	-		CCNA_02387	0.63	+0.8
2,531,604	-		CCNA_02387	0.63	+1.2
2,531,604	-				+3.0
2,531,607	+		CCNA_02387	0.63	+0.6
2,531,645	+		CCNA_02387	0.66	-0.5
2,531,706	+		CCNA_02387	0.70	+2.2
2,531,708	+		CCNA_02387	0.70	+1.2
2,531,710	+		CCNA_02387	0.71	+0.9
2,531,710	+		CCNA_02387	0.71	+0.9
2,531,718	-		CCNA_02387	0.71	+2.7