Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02286

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,434,485	-		CCNA_02284	0.56	-0.5
2,434,491	+		CCNA_02284	0.57	+0.5
2,434,562	-		CCNA_02284	0.68	-1.5
2,434,595	+		CCNA_02284	0.74	+0.8
2,434,628	+		CCNA_02284	0.79	-0.4
2,434,642	+		CCNA_02284	0.81	-1.9
2,434,650	-		CCNA_02284	0.82	+1.0
2,434,674	-		CCNA_02284	0.86	-0.2
2,434,704	-				-1.1
2,434,714	-				-0.3
2,434,797	-				-0.2
2,434,807	-				-0.2
2,434,887	+		CCNA_02285	0.15	-1.2
2,434,887	-		CCNA_02285	0.15	+0.6
2,434,907	+		CCNA_02285	0.19	+1.8
2,434,907	+		CCNA_02285	0.19	+0.0
2,434,915	-		CCNA_02285	0.20	-0.1
2,434,917	-		CCNA_02285	0.21	+0.6
2,434,936	+		CCNA_02285	0.25	-1.7
2,434,936	+		CCNA_02285	0.25	-0.6
2,434,944	-		CCNA_02285	0.27	-0.4
2,434,944	-		CCNA_02285	0.27	-0.0
2,434,945	-		CCNA_02285	0.27	+0.1
2,434,972	-		CCNA_02285	0.32	-0.5
2,434,972	-		CCNA_02285	0.32	-0.9
2,434,993	+		CCNA_02285	0.37	-0.1
2,435,019	-		CCNA_02285	0.42	-1.4
2,435,021	+		CCNA_02285	0.42	+0.0
2,435,036	+		CCNA_02285	0.46	+1.7
2,435,077	-		CCNA_02285	0.54	-1.1
2,435,077	-		CCNA_02285	0.54	+1.2
2,435,098	+		CCNA_02285	0.58	-0.8
2,435,098	+		CCNA_02285	0.58	-0.7
2,435,098	+		CCNA_02285	0.58	-1.4
2,435,106	-		CCNA_02285	0.60	+0.2
2,435,106	-		CCNA_02285	0.60	+1.1
2,435,106	-		CCNA_02285	0.60	-0.2
2,435,137	+		CCNA_02285	0.66	+0.2
2,435,149	+		CCNA_02285	0.69	-0.4
2,435,157	-		CCNA_02285	0.71	-0.5
2,435,204	+		CCNA_02285	0.80	-1.2
2,435,281	+				+0.5
2,435,338	+				+0.0
2,435,346	-				+2.3
2,435,351	-				-0.3
2,435,361	-				+1.2
2,435,370	-				+2.6
2,435,403	+				-1.0
2,435,403	+				+0.2
2,435,411	-				-0.9
2,435,440	+				+2.4
2,435,440	+				-0.9
2,435,448	-				+0.2
2,435,448	-				+0.4
2,435,496	-		CCNA_02286	0.18	-1.0
2,435,509	+		CCNA_02286	0.30	-0.9
2,435,620	+				+0.4
2,435,621	+				-0.6
2,435,630	-				-0.7
2,435,662	-				+1.7
2,435,751	-				-1.5
2,435,751	-				+1.7
2,435,769	+				+1.6
2,435,774	+				-1.4
2,435,782	+				+2.2
2,435,790	-				-1.0
2,435,790	-				+2.0
2,435,796	+				+1.8
2,435,796	+				+2.7
2,435,796	+				+1.8
2,435,804	-				+1.0
2,435,813	+				+2.5
2,435,894	+		CCNA_02287	0.22	+3.4
2,435,932	-		CCNA_02287	0.28	-0.1
2,435,939	+		CCNA_02287	0.29	+5.9
2,435,939	+		CCNA_02287	0.29	+5.5
2,435,939	+		CCNA_02287	0.29	+3.3
2,435,939	+		CCNA_02287	0.29	+3.4
2,435,939	+		CCNA_02287	0.29	+3.0
2,435,939	+		CCNA_02287	0.29	+1.4
2,435,947	-		CCNA_02287	0.31	+2.9
2,435,969	-		CCNA_02287	0.34	-0.2
2,436,045	+		CCNA_02287	0.46	+3.4
2,436,053	-		CCNA_02287	0.47	+1.3
2,436,053	-		CCNA_02287	0.47	-0.4
2,436,078	-		CCNA_02287	0.51	-0.3
2,436,090	+		CCNA_02287	0.53	+3.7
2,436,090	+		CCNA_02287	0.53	+3.4
2,436,090	+		CCNA_02287	0.53	+3.3
2,436,090	+		CCNA_02287	0.53	+4.1
2,436,098	-		CCNA_02287	0.55	-1.1
2,436,098	-		CCNA_02287	0.55	+0.5
2,436,098	-		CCNA_02287	0.55	+0.0
2,436,098	-		CCNA_02287	0.55	-0.7
2,436,120	-		CCNA_02287	0.58	-1.1
2,436,124	-		CCNA_02287	0.59	+0.0
2,436,131	+		CCNA_02287	0.60	+3.2
2,436,131	+		CCNA_02287	0.60	+4.1
2,436,131	+		CCNA_02287	0.60	+3.8
2,436,131	+		CCNA_02287	0.60	+3.7
2,436,140	+		CCNA_02287	0.61	+2.8
2,436,147	+		CCNA_02287	0.62	+3.4
2,436,174	+		CCNA_02287	0.67	+6.4
2,436,208	+		CCNA_02287	0.72	+3.6
2,436,215	-		CCNA_02287	0.73	+1.7
2,436,244	+		CCNA_02287	0.78	+3.7
2,436,249	+		CCNA_02287	0.79	+3.4
2,436,276	-		CCNA_02287	0.83	-2.2
2,436,276	-		CCNA_02287	0.83	+0.1
2,436,287	+		CCNA_02287	0.85	+3.7
2,436,330	+				+1.6
2,436,377	+				-0.4
2,436,397	+				-0.7
2,436,404	-				-0.4
2,436,405	-				-1.0
2,436,414	+				-2.3
2,436,441	+				-0.0
2,436,444	-				+0.8
2,436,446	+				-2.5
2,436,456	+				+0.7
2,436,472	+		CCNA_02288	0.11	+0.2
2,436,508	+		CCNA_02288	0.15	+2.2
2,436,565	-		CCNA_02288	0.22	+1.0
2,436,572	+		CCNA_02288	0.23	-0.7
2,436,577	+		CCNA_02288	0.23	-0.4
2,436,580	-		CCNA_02288	0.24	+0.4
2,436,580	-		CCNA_02288	0.24	-1.1