Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02244

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,392,316	+		CCNA_02243	0.37	+7.0
2,392,324	-		CCNA_02243	0.38	+4.9
2,392,324	-		CCNA_02243	0.38	+5.0
2,392,335	+		CCNA_02243	0.39	+7.1
2,392,335	+		CCNA_02243	0.39	+7.2
2,392,343	-		CCNA_02243	0.39	+5.2
2,392,343	-		CCNA_02243	0.39	+4.9
2,392,359	-		CCNA_02243	0.41	+5.4
2,392,372	+		CCNA_02243	0.42	+7.3
2,392,374	+		CCNA_02243	0.42	+7.2
2,392,374	+		CCNA_02243	0.42	+6.4
2,392,382	-				+8.2
2,392,382	-		CCNA_02243	0.42	+3.7
2,392,459	+		CCNA_02243	0.48	+6.9
2,392,459	+		CCNA_02243	0.48	+7.4
2,392,467	-		CCNA_02243	0.49	+4.5
2,392,514	+		CCNA_02243	0.52	+6.9
2,392,514	+		CCNA_02243	0.52	+7.1
2,392,514	+		CCNA_02243	0.52	+7.0
2,392,522	-		CCNA_02243	0.53	+4.9
2,392,536	+		CCNA_02243	0.54	+7.5
2,392,546	+		CCNA_02243	0.54	+7.2
2,392,546	+		CCNA_02243	0.54	+8.3
2,392,583	+		CCNA_02243	0.57	+7.2
2,392,583	+		CCNA_02243	0.57	+7.0
2,392,584	+		CCNA_02243	0.57	+7.6
2,392,591	-		CCNA_02243	0.58	+5.2
2,392,591	-		CCNA_02243	0.58	+3.9
2,392,612	-		CCNA_02243	0.59	+4.3
2,392,625	-		CCNA_02243	0.60	+3.2
2,392,636	+		CCNA_02243	0.61	+7.1
2,392,637	+		CCNA_02243	0.61	+7.1
2,392,642	+		CCNA_02243	0.61	+7.0
2,392,645	-		CCNA_02243	0.62	+4.0
2,392,698	+		CCNA_02243	0.66	+6.8
2,392,698	+		CCNA_02243	0.66	+6.9
2,392,698	+		CCNA_02243	0.66	+7.0
2,392,706	-		CCNA_02243	0.66	+5.4
2,392,706	-		CCNA_02243	0.66	+5.3
2,392,706	-		CCNA_02243	0.66	+5.8
2,392,706	-		CCNA_02243	0.66	+4.6
2,392,706	-		CCNA_02243	0.66	+6.0
2,392,706	-		CCNA_02243	0.66	+5.4
2,392,713	+		CCNA_02243	0.67	+6.8
2,392,730	-		CCNA_02243	0.68	+1.9
2,392,753	+		CCNA_02243	0.70	+3.9
2,392,753	+		CCNA_02243	0.70	+4.4
2,392,762	+		CCNA_02243	0.70	+3.8
2,392,830	+		CCNA_02243	0.75	+4.6
2,392,830	+		CCNA_02243	0.75	+4.4
2,392,838	-		CCNA_02243	0.76	+7.0
2,392,849	+		CCNA_02243	0.77	+3.9
2,392,849	+		CCNA_02243	0.77	+3.6
2,392,875	+		CCNA_02243	0.79	+4.2
2,392,875	+		CCNA_02243	0.79	+4.7
2,392,875	+		CCNA_02243	0.79	+4.4
2,392,875	+		CCNA_02243	0.79	+5.5
2,392,879	-		CCNA_02243	0.79	+4.5
2,392,883	-		CCNA_02243	0.79	+3.2
2,392,883	-		CCNA_02243	0.79	+3.2
2,392,883	-		CCNA_02243	0.79	+4.2
2,392,883	-		CCNA_02243	0.79	+4.1
2,392,883	-		CCNA_02243	0.79	+3.4
2,392,909	+		CCNA_02243	0.81	+4.6
2,392,917	-		CCNA_02243	0.82	+6.3
2,392,917	-		CCNA_02243	0.82	+4.7
2,392,921	+		CCNA_02243	0.82	+4.0
2,392,927	+		CCNA_02243	0.82	+3.1
2,392,927	+		CCNA_02243	0.82	+2.8
2,392,927	+		CCNA_02243	0.82	+2.6
2,392,927	+		CCNA_02243	0.82	+2.8
2,392,935	-		CCNA_02243	0.83	+2.4
2,392,946	+		CCNA_02243	0.84	+6.0
2,392,959	-		CCNA_02243	0.85	+3.6
2,393,013	+		CCNA_02243	0.89	+3.1
2,393,043	+				+5.2
2,393,043	+				+4.9
2,393,065	+				+5.6
2,393,077	+				+5.1
2,393,077	+				+5.0
2,393,077	+				+4.9
2,393,085	-				+4.0
2,393,085	-				+3.3
2,393,113	-				+3.9
2,393,118	-				+3.9
2,393,122	+				+5.7
2,393,143	-				+4.0
2,393,145	+				+5.7
2,393,148	-				+3.0
2,393,210	+				+1.5
2,393,333	-				+0.9
2,393,470	+		CCNA_02244	0.15	+0.2
2,393,519	+		CCNA_02244	0.19	-0.9
2,393,526	+		CCNA_02244	0.20	-0.9
2,393,527	-		CCNA_02244	0.20	+0.1
2,393,528	-		CCNA_02244	0.20	+0.3
2,393,534	-		CCNA_02244	0.20	+0.8
2,393,534	-		CCNA_02244	0.20	+1.2
2,393,534	-		CCNA_02244	0.20	+1.4
2,393,569	+		CCNA_02244	0.23	+2.3
2,393,576	+		CCNA_02244	0.23	-1.9
2,393,597	+		CCNA_02244	0.25	-0.6
2,393,605	-		CCNA_02244	0.26	-0.1
2,393,616	-		CCNA_02244	0.27	+0.3
2,393,622	+		CCNA_02244	0.27	-0.2
2,393,663	+		CCNA_02244	0.30	-0.1
2,393,668	+		CCNA_02244	0.31	-1.1
2,393,668	+		CCNA_02244	0.31	+0.5
2,393,671	-		CCNA_02244	0.31	+1.0
2,393,671	-		CCNA_02244	0.31	-0.4
2,393,671	-		CCNA_02244	0.31	+0.6
2,393,689	+		CCNA_02244	0.32	-0.8
2,393,697	-		CCNA_02244	0.33	+1.0
2,393,710	+		CCNA_02244	0.34	+0.4
2,393,718	+		CCNA_02244	0.35	-0.9
2,393,718	+		CCNA_02244	0.35	-1.6
2,393,762	-		CCNA_02244	0.38	+0.4
2,393,777	-		CCNA_02244	0.39	+1.0
2,393,845	+		CCNA_02244	0.45	-1.1
2,393,885	-		CCNA_02244	0.48	+1.9
2,393,889	+		CCNA_02244	0.48	+0.4
2,393,897	-		CCNA_02244	0.49	+0.2
2,393,920	-		CCNA_02244	0.50	-0.0
2,393,938	+		CCNA_02244	0.52	+0.9
2,393,946	-		CCNA_02244	0.52	-0.3
2,393,979	+		CCNA_02244	0.55	+1.1
2,393,987	-		CCNA_02244	0.56	+0.2
2,393,994	-		CCNA_02244	0.56	+1.9
2,394,033	+		CCNA_02244	0.59	+0.7
2,394,033	+		CCNA_02244	0.59	-0.3
2,394,056	-		CCNA_02244	0.61	+0.7
2,394,066	-		CCNA_02244	0.62	+0.2
2,394,066	-		CCNA_02244	0.62	+0.7
2,394,073	+		CCNA_02244	0.62	+0.4
2,394,076	-		CCNA_02244	0.63	+2.6
2,394,097	-		CCNA_02244	0.64	+1.1
2,394,132	-		CCNA_02244	0.67	+0.9
2,394,144	+		CCNA_02244	0.68	+1.5
2,394,166	+		CCNA_02244	0.70	-0.1
2,394,211	-		CCNA_02244	0.73	+0.5
2,394,213	-		CCNA_02244	0.73	-0.1
2,394,290	-		CCNA_02244	0.79	+0.1
2,394,310	+		CCNA_02244	0.81	-1.2
2,394,310	+		CCNA_02244	0.81	-0.8
2,394,328	-		CCNA_02244	0.82	-0.3
2,394,328	-		CCNA_02244	0.82	+0.0
2,394,368	-		CCNA_02244	0.85	-0.5
2,394,402	+		CCNA_02244	0.88	+2.6
2,394,402	+		CCNA_02244	0.88	+0.5
2,394,466	-				-0.4
2,394,466	-				+0.4
2,394,466	-				+1.1
2,394,483	+				+1.5
2,394,483	+				+1.7
2,394,483	+				-0.9
2,394,483	+				+0.5
2,394,491	-				-0.4
2,394,491	-				+0.4
2,394,499	+				-2.2
2,394,517	+				+0.4
2,394,525	-				+0.2
2,394,525	-				-0.7
2,394,525	-				+1.1
2,394,525	-				+0.7
2,394,525	-				+2.1
2,394,583	+				+1.1
2,394,595	-				+0.8
2,394,610	+		CCNA_03964	0.20	-0.7
2,394,610	+		CCNA_03964	0.20	+1.2
2,394,618	-		CCNA_03964	0.33	+1.4
2,394,618	-				+3.1
2,394,618	-		CCNA_03964	0.33	+1.7
2,394,655	-				+0.7
2,394,676	-				+0.8
2,394,706	+		CCNA_02245	0.11	-1.3
2,394,706	+		CCNA_02245	0.11	-0.8
2,394,741	-		CCNA_02245	0.19	+1.3
2,394,743	+		CCNA_02245	0.20	-0.9
2,394,748	-		CCNA_02245	0.21	-0.2
2,394,771	+		CCNA_02245	0.26	+2.5
2,394,781	+		CCNA_02245	0.28	-0.1
2,394,781	+		CCNA_02245	0.28	+0.8
2,394,781	+		CCNA_02245	0.28	-1.0
2,394,781	+		CCNA_02245	0.28	-0.1
2,394,781	+		CCNA_02245	0.28	+1.7
2,394,781	+		CCNA_02245	0.28	-2.3
2,394,781	+		CCNA_02245	0.28	-0.4
2,394,781	+		CCNA_02245	0.28	+0.1
2,394,781	+		CCNA_02245	0.28	-0.2
2,394,781	+		CCNA_02245	0.28	+0.9
2,394,789	-		CCNA_02245	0.30	+1.2
2,394,789	-		CCNA_02245	0.30	-0.2
2,394,789	-		CCNA_02245	0.30	+3.6
2,394,789	-		CCNA_02245	0.30	-0.3
2,394,789	-		CCNA_02245	0.30	-0.3
2,394,789	-		CCNA_02245	0.30	+0.1
2,394,789	-		CCNA_02245	0.30	-0.0
2,394,789	-		CCNA_02245	0.30	+1.1
2,394,789	-		CCNA_02245	0.30	-0.0
2,394,789	-		CCNA_02245	0.30	-0.7
2,394,789	-		CCNA_02245	0.30	-0.1
2,394,856	-		CCNA_02245	0.45	+0.1
2,394,872	-		CCNA_02245	0.48	+0.6
2,394,935	+		CCNA_02245	0.62	-0.8
2,394,966	-		CCNA_02245	0.69	-0.5
2,395,033	+		CCNA_02245	0.84	+1.9
2,395,033	+		CCNA_02245	0.84	+1.1
2,395,033	+		CCNA_02245	0.84	-0.9
2,395,041	-		CCNA_02245	0.85	+0.6
2,395,041	-		CCNA_02245	0.85	+0.2
2,395,080	-				+0.6
2,395,080	-				-0.1
2,395,092	-				+0.5
2,395,221	+				-0.5
2,395,226	+				-1.1
2,395,229	-				+1.2
2,395,229	-				+1.3
2,395,229	-				+0.7
2,395,229	-				+2.2
2,395,234	+				-0.8