Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02126

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,278,413	-		CCNA_02125	0.73	+1.9
2,278,463	+		CCNA_02125	0.75	-1.8
2,278,463	+		CCNA_02125	0.75	+1.2
2,278,463	-		CCNA_02125	0.75	+1.4
2,278,507	+		CCNA_02125	0.76	+0.8
2,278,517	+		CCNA_02125	0.77	-0.8
2,278,550	+		CCNA_02125	0.78	+1.3
2,278,552	-		CCNA_02125	0.78	+1.1
2,278,558	-		CCNA_02125	0.78	+1.8
2,278,558	-		CCNA_02125	0.78	+1.0
2,278,558	-		CCNA_02125	0.78	+2.6
2,278,630	+		CCNA_02125	0.81	-0.6
2,278,648	-		CCNA_02125	0.81	-0.0
2,278,672	+		CCNA_02125	0.82	+2.1
2,278,680	-		CCNA_02125	0.82	+1.4
2,278,700	-		CCNA_02125	0.83	+1.4
2,278,705	-		CCNA_02125	0.83	+0.9
2,278,732	+		CCNA_02125	0.84	+0.5
2,278,756	-		CCNA_02125	0.85	+1.2
2,278,792	-		CCNA_02125	0.86	+1.4
2,278,792	-		CCNA_02125	0.86	+1.3
2,278,836	-		CCNA_02125	0.88	+1.3
2,278,922	-				+1.0
2,278,996	+				-1.3
2,279,023	+				+1.1
2,279,031	-				+0.8
2,279,052	+				-0.8
2,279,052	+				-2.1
2,279,174	-				+1.1
2,279,174	-				+0.4
2,279,333	-				-0.1
2,279,335	+				-0.4
2,279,358	-				+0.6
2,279,392	-				-0.8
2,279,399	-				-1.1
2,279,413	+				-1.6
2,279,416	-				-1.4
2,279,443	-				+2.4
2,279,467	-		CCNA_02126	0.29	-0.1
2,279,469	+		CCNA_02126	0.30	+0.8
2,279,477	-		CCNA_02126	0.33	-0.4
2,279,605	+				+2.2
2,279,614	+				+1.6
2,279,614	+				+0.6
2,279,614	+				-0.4
2,279,622	-				-0.1
2,279,622	-				-1.1
2,279,662	+				-1.8
2,279,671	-				-1.4
2,279,722	+				-2.7
2,279,722	+				-1.9
2,279,722	+				+0.3
2,279,722	+				-0.9
2,279,725	-				-0.3
2,279,730	-				-3.3
2,279,730	-				-2.3
2,279,730	-				-1.1
2,279,773	-				-1.3
2,279,789	+		CCNA_02127	0.10	-1.6
2,279,797	-		CCNA_02127	0.11	-0.4
2,279,797	-		CCNA_02127	0.11	-2.1
2,279,797	-		CCNA_02127	0.11	+0.5
2,279,806	-		CCNA_02127	0.11	-1.7
2,279,827	-		CCNA_02127	0.13	-1.0
2,279,886	-		CCNA_02127	0.16	-0.9
2,279,935	-		CCNA_02127	0.19	-1.2
2,279,956	+		CCNA_02127	0.20	+0.8
2,279,968	+		CCNA_02127	0.21	-1.1
2,279,973	-		CCNA_02127	0.21	-0.7
2,279,979	+		CCNA_02127	0.22	+0.5
2,279,979	+		CCNA_02127	0.22	+1.8
2,279,979	+		CCNA_02127	0.22	-0.2
2,279,987	-		CCNA_02127	0.22	-1.3
2,280,000	-		CCNA_02127	0.23	-1.3
2,280,004	+		CCNA_02127	0.23	-0.4
2,280,014	+		CCNA_02127	0.24	+0.4
2,280,026	+		CCNA_02127	0.25	-2.2
2,280,034	-		CCNA_02127	0.25	-0.8
2,280,034	-		CCNA_02127	0.25	-0.8
2,280,060	-		CCNA_02127	0.27	+0.3
2,280,102	-		CCNA_02127	0.29	-0.4
2,280,105	+		CCNA_02127	0.29	-0.7
2,280,113	-		CCNA_02127	0.30	-0.0
2,280,135	-		CCNA_02127	0.31	-1.2
2,280,155	+		CCNA_02127	0.32	-0.4
2,280,167	+		CCNA_02127	0.33	-1.4
2,280,214	-		CCNA_02127	0.36	-1.3
2,280,214	-		CCNA_02127	0.36	-0.8
2,280,214	-		CCNA_02127	0.36	-0.3
2,280,248	-		CCNA_02127	0.38	-1.9
2,280,299	-		CCNA_02127	0.41	-0.7
2,280,322	+				+2.0
2,280,324	+		CCNA_02127	0.43	-1.1
2,280,349	-		CCNA_02127	0.44	-1.7
2,280,349	-		CCNA_02127	0.44	-0.9
2,280,369	-		CCNA_02127	0.45	-0.6
2,280,388	+		CCNA_02127	0.46	-1.7
2,280,388	+		CCNA_02127	0.46	+0.4
2,280,396	-		CCNA_02127	0.47	-0.1
2,280,396	-		CCNA_02127	0.47	-0.0
2,280,415	-		CCNA_02127	0.48	-1.0
2,280,434	+		CCNA_02127	0.49	-1.8
2,280,434	+		CCNA_02127	0.49	-1.2
2,280,434	+		CCNA_02127	0.49	-0.1
2,280,442	-		CCNA_02127	0.50	-2.1
2,280,442	-		CCNA_02127	0.50	-2.7
2,280,442	-		CCNA_02127	0.50	-1.5
2,280,442	-		CCNA_02127	0.50	-0.5
2,280,516	+		CCNA_02127	0.54	-1.5
2,280,523	+		CCNA_02127	0.55	-1.6
2,280,593	+		CCNA_02127	0.59	-0.4
2,280,601	-		CCNA_02127	0.59	-1.3
2,280,612	-		CCNA_02127	0.60	-1.3
2,280,614	+		CCNA_02127	0.60	-1.6