Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02120

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,269,256	+		CCNA_02118	0.89	-1.5
2,269,321	-				-0.3
2,269,321	-				+2.6
2,269,378	-				-1.0
2,269,484	-				+0.6
2,269,493	-				-1.4
2,269,527	-				-0.5
2,269,558	+				-0.4
2,269,582	-		CCNA_02119	0.11	-1.7
2,269,598	+		CCNA_02119	0.13	-0.7
2,269,634	+		CCNA_02119	0.18	+1.4
2,269,642	+				+1.6
2,269,650	-		CCNA_02119	0.20	-0.5
2,269,650	-		CCNA_02119	0.20	-1.6
2,269,688	+		CCNA_02119	0.25	-1.4
2,269,711	+		CCNA_02119	0.29	+0.3
2,269,729	+		CCNA_02119	0.31	+1.8
2,269,734	+		CCNA_02119	0.32	+1.0
2,269,747	-		CCNA_02119	0.34	+0.1
2,269,765	-		CCNA_02119	0.36	-1.4
2,269,765	-		CCNA_02119	0.36	-0.9
2,269,809	+		CCNA_02119	0.42	-0.4
2,269,810	+		CCNA_02119	0.42	-2.0
2,269,810	+		CCNA_02119	0.42	-1.1
2,269,810	+		CCNA_02119	0.42	+0.3
2,269,810	+		CCNA_02119	0.42	-0.6
2,269,817	-		CCNA_02119	0.43	-1.1
2,269,818	-		CCNA_02119	0.44	+0.8
2,269,818	-		CCNA_02119	0.44	-0.8
2,269,818	-		CCNA_02119	0.44	-1.6
2,269,855	-		CCNA_02119	0.49	+0.7
2,269,855	-		CCNA_02119	0.49	-1.1
2,269,866	-		CCNA_02119	0.50	-0.9
2,269,889	+		CCNA_02119	0.54	+0.6
2,269,890	-		CCNA_02119	0.54	-0.8
2,269,924	+		CCNA_02119	0.58	+0.5
2,269,985	-		CCNA_02119	0.67	-1.4
2,269,985	-		CCNA_02119	0.67	-1.1
2,270,112	-		CCNA_02119	0.85	+0.9
2,270,172	-				+0.4
2,270,196	+				-1.8
2,270,196	+				-0.7
2,270,196	+				+0.1
2,270,196	+				-1.7
2,270,197	-				-1.6
2,270,204	-				-0.5
2,270,204	-				-0.1
2,270,204	-				-0.4
2,270,204	-				+0.6
2,270,264	+				+0.1
2,270,329	-		CCNA_02120	0.14	-1.9
2,270,340	-		CCNA_02120	0.15	+0.3
2,270,349	+		CCNA_02120	0.16	+0.3
2,270,351	+		CCNA_02120	0.16	+0.2
2,270,368	+		CCNA_02120	0.18	-1.6
2,270,459	+		CCNA_02120	0.27	-0.7
2,270,459	+		CCNA_02120	0.27	-0.3
2,270,543	-		CCNA_02120	0.36	+0.1
2,270,545	-		CCNA_02120	0.36	-1.3
2,270,554	+		CCNA_02120	0.37	-2.3
2,270,609	+		CCNA_02120	0.42	-1.1
2,270,609	+		CCNA_02120	0.42	+0.5
2,270,617	-		CCNA_02120	0.43	+0.4
2,270,663	+		CCNA_02120	0.48	-1.8
2,270,686	+		CCNA_02120	0.50	-1.4
2,270,686	+		CCNA_02120	0.50	+2.4
2,270,717	+		CCNA_02120	0.54	-1.2
2,270,747	+		CCNA_02120	0.57	+0.4
2,270,747	+		CCNA_02120	0.57	-0.3
2,270,778	-		CCNA_02120	0.60	-0.5
2,270,783	-		CCNA_02120	0.60	-2.2
2,270,807	-		CCNA_02120	0.63	-1.2
2,270,822	+		CCNA_02120	0.64	-0.7
2,270,830	-		CCNA_02120	0.65	-1.0
2,270,846	+		CCNA_02120	0.67	-0.8
2,270,848	+		CCNA_02120	0.67	-0.2
2,270,865	-		CCNA_02120	0.69	+1.7
2,270,963	-		CCNA_02120	0.79	-2.3
2,271,032	-		CCNA_02120	0.86	-0.0
2,271,032	-		CCNA_02120	0.86	-0.2
2,271,100	-				+0.7
2,271,117	+				+0.5
2,271,117	+				+0.3
2,271,125	-				-2.1
2,271,125	-				-1.7
2,271,134	+				+1.6
2,271,169	-				-2.6
2,271,176	-				+1.0
2,271,182	-				-1.4
2,271,184	-				+0.5
2,271,185	+				+0.2
2,271,213	-				-0.1
2,271,219	+				+0.6
2,271,226	+				+0.8
2,271,248	-				+1.6
2,271,341	-				+0.1
2,271,344	+				-0.9
2,271,346	-				+0.8
2,271,393	+				-1.3
2,271,401	-				-0.6
2,271,412	-				+0.1
2,271,423	+				+0.3
2,271,431	-				-1.9
2,271,450	+				+2.0
2,271,450	+				-0.9
2,271,497	+				+1.6
2,271,504	-				+1.0
2,271,509	+				-2.0
2,271,526	+				-1.7
2,271,534	-				-1.2
2,271,534	-				+0.4
2,271,685	+		CCNA_02121	0.15	+0.2
2,271,685	+		CCNA_02121	0.15	-1.0
2,271,690	+		CCNA_02121	0.15	+0.3
2,271,703	-		CCNA_02121	0.15	+1.3
2,271,719	+		CCNA_02121	0.16	+0.5
2,271,719	+		CCNA_02121	0.16	+0.6
2,271,724	+		CCNA_02121	0.16	+0.1
2,271,727	-		CCNA_02121	0.16	-2.3
2,271,756	+		CCNA_02121	0.17	-0.8
2,271,761	+		CCNA_02121	0.18	-1.7
2,271,894	-		CCNA_02121	0.23	-0.9
2,271,921	+		CCNA_02121	0.24	+2.0
2,271,961	-		CCNA_02121	0.25	-0.1
2,271,989	-		CCNA_02121	0.26	+1.3
2,272,004	-		CCNA_02121	0.27	-1.5
2,272,009	-		CCNA_02121	0.27	-2.4
2,272,032	-		CCNA_02121	0.28	-1.0
2,272,049	+		CCNA_02121	0.29	-0.7
2,272,049	+		CCNA_02121	0.29	+0.4
2,272,062	-		CCNA_02121	0.29	-0.2
2,272,104	-		CCNA_02121	0.31	-2.0
2,272,124	-		CCNA_02121	0.32	-0.7
2,272,134	+		CCNA_02121	0.32	-0.1
2,272,142	-		CCNA_02121	0.32	+0.3
2,272,142	-		CCNA_02121	0.32	-1.3
2,272,147	-		CCNA_02121	0.32	+0.8