Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02102

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,250,041	-				-1.2
2,250,048	-				-2.0
2,250,179	-		CCNA_02100	0.34	-0.1
2,250,187	-		CCNA_02100	0.36	-0.5
2,250,212	-		CCNA_02100	0.41	-0.4
2,250,221	-		CCNA_02100	0.43	-0.4
2,250,231	-		CCNA_02100	0.45	+0.6
2,250,231	-		CCNA_02100	0.45	-0.0
2,250,248	+		CCNA_02100	0.49	+0.8
2,250,272	+		CCNA_02100	0.54	-0.1
2,250,363	+		CCNA_02100	0.72	-0.3
2,250,364	+		CCNA_02100	0.73	+0.2
2,250,382	+		CCNA_02100	0.76	-0.8
2,250,390	-		CCNA_02100	0.78	-1.1
2,250,409	+		CCNA_02100	0.82	+0.3
2,250,453	+				-0.8
2,250,461	-				-1.6
2,250,461	-				-0.9
2,250,530	+				-0.9
2,250,696	-		CCNA_02101	0.22	-1.0
2,250,708	-		CCNA_02101	0.25	+1.4
2,250,832	+		CCNA_02101	0.57	-0.1
2,250,841	-		CCNA_02101	0.59	-1.2
2,250,934	-		CCNA_02101	0.83	-0.7
2,250,934	-		CCNA_02101	0.83	-1.3
2,250,988	-				-0.1
2,251,041	+				-1.8
2,251,041	+				+2.1
2,251,041	+				-0.5
2,251,049	-				-1.5
2,251,051	+				+0.9
2,251,059	-				-0.2
2,251,059	-				+0.3
2,251,064	-				+0.2
2,251,072	-				+2.6
2,251,076	-				-1.9
2,251,107	-				-0.3
2,251,107	-				+1.4
2,251,161	+		CCNA_02102	0.15	+2.8
2,251,168	+		CCNA_02102	0.16	+0.8
2,251,168	+		CCNA_02102	0.16	+0.5
2,251,168	+		CCNA_02102	0.16	-0.8
2,251,230	-		CCNA_02102	0.22	-0.3
2,251,267	-		CCNA_02102	0.25	-0.8
2,251,281	+		CCNA_02102	0.26	-1.6
2,251,332	+		CCNA_02102	0.31	-0.5
2,251,366	+		CCNA_02102	0.35	-1.3
2,251,371	+		CCNA_02102	0.35	+0.6
2,251,379	-		CCNA_02102	0.36	-0.5
2,251,379	-		CCNA_02102	0.36	-1.3
2,251,379	-		CCNA_02102	0.36	-0.4
2,251,379	-		CCNA_02102	0.36	+0.1
2,251,379	-		CCNA_02102	0.36	-1.0
2,251,421	+		CCNA_02102	0.40	-0.6
2,251,421	+		CCNA_02102	0.40	-1.0
2,251,421	+		CCNA_02102	0.40	+1.0
2,251,424	-		CCNA_02102	0.40	+0.7
2,251,429	-		CCNA_02102	0.41	+1.7
2,251,444	-		CCNA_02102	0.42	-1.3
2,251,460	+		CCNA_02102	0.44	-1.7
2,251,460	+		CCNA_02102	0.44	-0.6
2,251,460	+		CCNA_02102	0.44	-1.3
2,251,460	+		CCNA_02102	0.44	-0.7
2,251,460	+		CCNA_02102	0.44	-0.5
2,251,468	-		CCNA_02102	0.44	-0.3
2,251,468	-		CCNA_02102	0.44	-0.5
2,251,486	+		CCNA_02102	0.46	+0.2
2,251,504	+		CCNA_02102	0.48	-0.1
2,251,514	+		CCNA_02102	0.49	-0.6
2,251,528	+		CCNA_02102	0.50	-0.7
2,251,530	-		CCNA_02102	0.50	+0.2
2,251,634	-		CCNA_02102	0.60	+0.6
2,251,645	-		CCNA_02102	0.61	-2.5
2,251,650	-		CCNA_02102	0.62	-0.5
2,251,668	-		CCNA_02102	0.64	-4.0
2,251,668	-		CCNA_02102	0.64	+1.1
2,251,688	+		CCNA_02102	0.65	-1.5
2,251,688	+		CCNA_02102	0.65	-0.0
2,251,701	-		CCNA_02102	0.67	+0.1
2,251,839	+				+1.2
2,251,873	-		CCNA_02102	0.83	-1.2
2,251,890	+		CCNA_02102	0.85	+4.0
2,251,895	+		CCNA_02102	0.85	-0.8
2,251,939	+		CCNA_02102	0.89	-1.8
2,251,941	+		CCNA_02102	0.90	-0.6
2,252,013	+				-1.1
2,252,021	-				-1.0
2,252,025	+				-0.9
2,252,042	+				-1.1
2,252,042	+				+1.1
2,252,050	-				-1.2
2,252,072	-				-0.4
2,252,080	+				+1.4
2,252,096	-				+1.5
2,252,096	-				+1.1
2,252,096	-				+1.4
2,252,101	-		CCNA_02103	0.10	+1.4
2,252,118	-		CCNA_02103	0.13	+1.8
2,252,166	-		CCNA_02103	0.22	+1.8
2,252,187	-		CCNA_02103	0.25	+3.8
2,252,187	-		CCNA_02103	0.25	+4.4
2,252,187	-		CCNA_02103	0.25	+1.8
2,252,187	-		CCNA_02103	0.25	+4.1
2,252,370	-		CCNA_02103	0.58	+1.5
2,252,521	-		CCNA_02103	0.85	+1.9
2,252,575	-				+2.3
2,252,608	+				+0.5
2,252,624	-				+1.6
2,252,662	-		CCNA_02104	0.17	-0.7
2,252,691	+		CCNA_02104	0.26	-0.9
2,252,705	+		CCNA_02104	0.30	-0.5
2,252,740	-		CCNA_02104	0.40	+0.5
2,252,754	-		CCNA_02104	0.44	-2.1
2,252,791	-		CCNA_02104	0.55	-1.9
2,252,807	-		CCNA_02104	0.60	+0.5
2,252,826	+		CCNA_02104	0.66	+2.2
2,252,842	+		CCNA_02104	0.71	+0.3
2,252,851	-		CCNA_02104	0.73	-1.8
2,252,895	-		CCNA_02104	0.86	-0.2
2,252,930	+				+0.6