Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02001

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,146,450	-		CCNA_02000	0.15	+1.2
2,147,423	-				-0.4
2,147,428	-				-2.5
2,147,440	+				+0.2
2,147,530	-		CCNA_02001	0.13	-0.4
2,147,532	-		CCNA_02001	0.13	+0.6
2,147,534	+		CCNA_02001	0.13	-1.0
2,147,564	-		CCNA_02001	0.18	+0.7
2,147,599	-		CCNA_02001	0.23	-1.3
2,147,618	+		CCNA_02001	0.26	-0.6
2,147,659	-		CCNA_02001	0.33	-0.3
2,147,731	+		CCNA_02001	0.44	-1.3
2,147,731	+		CCNA_02001	0.44	+0.5
2,147,749	-		CCNA_02001	0.46	-1.8
2,147,750	-		CCNA_02001	0.47	+0.3
2,147,803	-		CCNA_02001	0.55	-0.4
2,147,818	+				+2.2
2,147,826	-		CCNA_02001	0.58	-0.4
2,147,826	-		CCNA_02001	0.58	+1.4
2,147,826	-		CCNA_02001	0.58	+0.4
2,147,826	-		CCNA_02001	0.58	+0.0
2,147,826	-		CCNA_02001	0.58	-0.3
2,147,860	+		CCNA_02001	0.63	-1.5
2,147,865	+		CCNA_02001	0.64	+0.7
2,147,865	+		CCNA_02001	0.64	+0.5
2,147,865	+		CCNA_02001	0.64	-0.4
2,147,865	+		CCNA_02001	0.64	+0.3
2,147,865	+		CCNA_02001	0.64	+1.2
2,147,868	-		CCNA_02001	0.65	-1.0
2,147,873	-		CCNA_02001	0.65	-1.1
2,147,873	-		CCNA_02001	0.65	-0.5
2,147,873	-		CCNA_02001	0.65	-0.3
2,147,912	+		CCNA_02001	0.71	+1.2
2,147,923	+		CCNA_02001	0.73	+0.1
2,147,923	+		CCNA_02001	0.73	-1.3
2,147,924	+		CCNA_02001	0.73	-0.3
2,147,926	-		CCNA_02001	0.74	-1.2
2,147,951	+		CCNA_02001	0.77	-0.7
2,147,957	+		CCNA_02001	0.78	+0.4
2,147,957	+		CCNA_02001	0.78	-1.0
2,147,957	+		CCNA_02001	0.78	-1.3
2,147,979	-		CCNA_02001	0.82	-2.5
2,147,984	-		CCNA_02001	0.82	-0.7
2,148,050	+				-1.3
2,148,067	+				-0.5
2,148,086	-				-0.8
2,148,103	+				-0.5
2,148,112	+				+1.6
2,148,117	+				+0.5
2,148,120	-				+1.2
2,148,120	-				+0.3
2,148,125	-				-1.2
2,148,133	+				-0.8
2,148,138	+				-0.3
2,148,146	-				-1.9
2,148,146	-				-0.2
2,148,164	-				+1.7
2,148,164	-				-0.6
2,148,164	-				-0.7
2,148,171	+				-0.9
2,148,180	-		CCNA_02002	0.11	+1.2
2,148,187	-		CCNA_02002	0.12	+0.7
2,148,201	-		CCNA_02002	0.14	-0.2
2,148,201	-		CCNA_02002	0.14	-0.3
2,148,227	+		CCNA_02002	0.19	+0.3
2,148,227	+		CCNA_02002	0.19	-1.7
2,148,295	+		CCNA_02002	0.29	+0.3
2,148,333	+		CCNA_02002	0.35	-0.1
2,148,350	-		CCNA_02002	0.38	-1.6
2,148,350	-		CCNA_02002	0.38	+1.0
2,148,377	-		CCNA_02002	0.42	+0.2
2,148,377	-		CCNA_02002	0.42	+1.6
2,148,378	+		CCNA_02002	0.43	+1.2
2,148,386	-		CCNA_02002	0.44	+0.1
2,148,427	+		CCNA_02002	0.50	-0.1
2,148,434	-		CCNA_02002	0.51	-1.3
2,148,445	-		CCNA_02002	0.53	-0.1
2,148,463	+		CCNA_02002	0.56	+0.7
2,148,474	+		CCNA_02002	0.58	-0.1
2,148,474	+		CCNA_02002	0.58	-0.7
2,148,482	-		CCNA_02002	0.59	-1.9
2,148,496	+		CCNA_02002	0.61	-0.9
2,148,504	-		CCNA_02002	0.63	-1.2
2,148,551	-		CCNA_02002	0.70	+1.0
2,148,559	-		CCNA_02002	0.71	+0.2
2,148,559	-		CCNA_02002	0.71	-1.0
2,148,595	+		CCNA_02002	0.77	-0.5
2,148,662	-		CCNA_02002	0.88	-1.4
2,148,662	-		CCNA_02002	0.88	+1.8
2,148,662	-		CCNA_02002	0.88	-0.6
2,148,662	-		CCNA_02002	0.88	-0.2
2,148,662	-		CCNA_02002	0.88	-0.1
2,148,675	+		CCNA_02002	0.90	-0.6
2,148,688	+				+1.4
2,148,696	-				+0.7
2,148,795	+				-0.3