Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01944

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,085,335	-		CCNA_01942	0.87	+0.3
2,085,339	+		CCNA_01942	0.88	+0.9
2,085,400	+				+0.1
2,085,400	+				+0.8
2,085,400	+				-0.6
2,085,400	+				-0.4
2,085,400	+				-0.9
2,085,400	+				+0.6
2,085,400	+				-1.2
2,085,400	+				-1.1
2,085,400	+				-0.1
2,085,400	+				-1.3
2,085,407	-				-0.4
2,085,408	-				-1.5
2,085,408	-				+0.6
2,085,408	-				+0.9
2,085,408	-				-0.5
2,085,408	-				-0.5
2,085,408	-				-0.3
2,085,408	-				-0.3
2,085,408	-				-0.4
2,085,408	-				+0.0
2,085,408	-				+1.3
2,085,408	-				+2.6
2,085,408	-				-1.0
2,085,408	-				+0.9
2,085,408	-				+0.3
2,085,408	-				-1.5
2,085,451	-				+2.3
2,086,025	+		CCNA_01943	0.69	+1.6
2,086,234	+				+1.7
2,086,242	-				-0.5
2,086,244	+				+0.3
2,086,244	+				+1.2
2,086,244	+				+1.3
2,086,252	-				+0.6
2,086,256	+				+0.2
2,086,291	+				-0.5
2,086,299	-				-0.1
2,086,299	-				+1.4
2,086,346	-		CCNA_01944	0.10	+1.2
2,086,361	-		CCNA_01944	0.13	-0.9
2,086,617	-		CCNA_01944	0.62	+1.4
2,086,617	-		CCNA_01944	0.62	+0.2
2,086,617	-		CCNA_01944	0.62	+1.2
2,086,669	-		CCNA_01944	0.72	+1.0
2,086,669	-		CCNA_01944	0.72	+0.2
2,086,679	+		CCNA_01944	0.74	-0.1
2,086,721	+		CCNA_01944	0.82	-1.4
2,086,724	-		CCNA_01944	0.83	+1.2
2,086,739	-		CCNA_01944	0.86	+1.1
2,086,767	-				+0.1
2,086,767	-				-1.3
2,086,784	-				+1.9
2,086,863	-				-1.4
2,086,863	-				-1.3
2,086,866	+				-0.7
2,086,866	+				+0.3
2,086,866	+				-0.5
2,086,866	+				+1.2
2,086,866	+				-0.3
2,086,866	+				-0.5
2,086,866	+				+3.2
2,086,866	+				-1.2
2,086,866	+				-1.1
2,086,866	+				-0.2
2,086,866	+				+1.2
2,086,866	+				-0.1
2,086,874	-				-0.9
2,086,874	-				-1.3
2,086,874	-				+3.1
2,086,874	-				-0.9
2,086,874	-				-0.5
2,086,874	-				+0.5
2,086,874	-				-1.5
2,086,874	-				-0.7
2,086,874	-				+0.2
2,086,874	-				+0.6
2,086,874	-				+1.2
2,086,874	-				-0.6
2,086,874	-				+0.0
2,086,874	-				-0.2
2,086,877	+				+0.4
2,086,921	-				-1.2
2,086,967	+				-0.2
2,086,971	+				+0.6
2,086,987	-				-0.2
2,086,990	+				+0.7
2,087,005	-				+0.6
2,087,011	+				+0.5
2,087,026	-		CCNA_01945	0.11	-1.8
2,087,031	-		CCNA_01945	0.11	-1.0
2,087,031	-		CCNA_01945	0.11	+1.6
2,087,038	-		CCNA_01945	0.12	-1.9
2,087,079	+		CCNA_01945	0.15	+1.1
2,087,079	+		CCNA_01945	0.15	+1.6
2,087,079	+		CCNA_01945	0.15	+1.1
2,087,087	-		CCNA_01945	0.16	+2.2
2,087,087	-		CCNA_01945	0.16	-0.6
2,087,087	-		CCNA_01945	0.16	-1.6
2,087,125	-		CCNA_01945	0.20	+0.8
2,087,160	-		CCNA_01945	0.23	-0.1
2,087,160	-		CCNA_01945	0.23	-0.7
2,087,170	-		CCNA_01945	0.24	+0.7
2,087,188	-		CCNA_01945	0.25	+1.3
2,087,188	-		CCNA_01945	0.25	+0.6
2,087,214	-		CCNA_01945	0.28	+1.5
2,087,249	+		CCNA_01945	0.31	+0.2
2,087,257	-		CCNA_01945	0.32	-1.3
2,087,304	+		CCNA_01945	0.36	+0.9
2,087,304	+		CCNA_01945	0.36	-0.5
2,087,312	+		CCNA_01945	0.37	+0.4
2,087,358	+		CCNA_01945	0.41	+0.1
2,087,358	+		CCNA_01945	0.41	-0.1
2,087,366	-		CCNA_01945	0.42	+0.3
2,087,366	-		CCNA_01945	0.42	-1.2
2,087,401	-		CCNA_01945	0.45	-0.4
2,087,401	-		CCNA_01945	0.45	-1.8
2,087,425	-		CCNA_01945	0.47	-0.1
2,087,425	-		CCNA_01945	0.47	-0.7
2,087,483	-		CCNA_01945	0.52	+0.2
2,087,492	-		CCNA_01945	0.53	+0.9
2,087,508	-		CCNA_01945	0.55	-1.3
2,087,521	+		CCNA_01945	0.56	+0.2
2,087,534	+		CCNA_01945	0.57	+0.5
2,087,536	-		CCNA_01945	0.57	-0.4
2,087,536	-		CCNA_01945	0.57	+0.8
2,087,603	-		CCNA_01945	0.63	-0.5
2,087,619	-		CCNA_01945	0.65	+0.2
2,087,654	+		CCNA_01945	0.68	-1.3
2,087,662	+		CCNA_01945	0.69	+0.0
2,087,712	-		CCNA_01945	0.73	+1.0
2,087,744	-		CCNA_01945	0.76	+0.3
2,087,744	-		CCNA_01945	0.76	-0.9
2,087,755	-		CCNA_01945	0.77	-0.2
2,087,776	+		CCNA_01945	0.79	+1.5
2,087,794	-		CCNA_01945	0.81	+0.1