Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01883

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,021,060	+		CCNA_01881	0.85	-2.5
2,021,099	+				-0.7
2,021,107	-				-0.8
2,021,137	+				-1.1
2,021,152	-				-1.6
2,021,189	+				+0.8
2,021,225	+				-0.8
2,021,235	+				-1.2
2,021,238	+				+0.1
2,021,238	+				-0.1
2,021,273	+		CCNA_01882	0.13	-1.3
2,021,320	+		CCNA_01882	0.19	-1.5
2,021,335	+		CCNA_01882	0.20	-1.8
2,021,335	+		CCNA_01882	0.20	+0.8
2,021,335	+		CCNA_01882	0.20	-0.2
2,021,335	+		CCNA_01882	0.20	+1.0
2,021,335	+		CCNA_01882	0.20	-0.7
2,021,335	+		CCNA_01882	0.20	+0.2
2,021,343	-		CCNA_01882	0.21	-1.2
2,021,435	+		CCNA_01882	0.32	-0.4
2,021,436	-		CCNA_01882	0.32	+0.1
2,021,436	-		CCNA_01882	0.32	+0.1
2,021,443	-		CCNA_01882	0.33	-0.5
2,021,443	-		CCNA_01882	0.33	-0.6
2,021,555	-		CCNA_01882	0.45	-0.9
2,021,597	-		CCNA_01882	0.50	-0.6
2,021,637	+		CCNA_01882	0.55	-0.9
2,021,651	+		CCNA_01882	0.56	-0.4
2,021,655	+		CCNA_01882	0.57	-1.1
2,021,686	-		CCNA_01882	0.60	+0.7
2,021,686	-		CCNA_01882	0.60	-1.0
2,021,699	-		CCNA_01882	0.62	-1.0
2,021,734	+		CCNA_01882	0.66	-0.3
2,021,734	+		CCNA_01882	0.66	-2.4
2,021,734	+		CCNA_01882	0.66	+0.3
2,021,742	-		CCNA_01882	0.67	+0.6
2,021,742	-		CCNA_01882	0.67	-2.2
2,021,786	+		CCNA_01882	0.72	+0.8
2,021,796	+		CCNA_01882	0.73	+0.9
2,021,812	-		CCNA_01882	0.74	+1.8
2,021,859	-		CCNA_01882	0.80	-0.7
2,021,873	+		CCNA_01882	0.81	-1.1
2,021,876	-		CCNA_01882	0.82	+0.7
2,021,884	+		CCNA_01882	0.83	-0.8
2,021,884	+		CCNA_01882	0.83	+0.6
2,021,934	-		CCNA_01882	0.88	+1.4
2,021,993	+				-0.4
2,021,993	+				+0.1
2,021,993	+				+1.8
2,021,993	+				-0.2
2,021,993	+				-0.1
2,021,993	+				-1.1
2,021,993	+				+0.3
2,021,993	+				-0.2
2,021,995	+				-1.2
2,022,001	-				+0.7
2,022,001	-				-0.2
2,022,001	-				-0.2
2,022,021	-				-0.1
2,022,030	+				+2.1
2,022,030	+				-0.2
2,022,043	-				-0.3
2,022,054	+				-0.4
2,022,054	+				-1.6
2,022,066	+				+0.1
2,022,147	+				+0.9
2,022,174	+		CCNA_01883	0.11	-0.3
2,022,186	+		CCNA_01883	0.12	+0.1
2,022,192	-		CCNA_01883	0.12	-0.1
2,022,228	+		CCNA_01883	0.15	-1.4
2,022,236	-		CCNA_01883	0.16	+0.7
2,022,252	+		CCNA_01883	0.17	+1.0
2,022,268	+		CCNA_01883	0.19	-1.0
2,022,269	+		CCNA_01883	0.19	-0.2
2,022,316	+		CCNA_01883	0.23	-0.6
2,022,326	+		CCNA_01883	0.24	-0.7
2,022,327	+		CCNA_01883	0.24	+0.3
2,022,342	+		CCNA_01883	0.25	+0.6
2,022,342	+		CCNA_01883	0.25	+1.1
2,022,374	-		CCNA_01883	0.28	-0.7
2,022,380	+		CCNA_01883	0.28	+0.8
2,022,387	-		CCNA_01883	0.29	-1.8
2,022,422	+		CCNA_01883	0.32	-0.6
2,022,447	-		CCNA_01883	0.34	-1.1
2,022,547	-		CCNA_01883	0.42	+0.1
2,022,571	+		CCNA_01883	0.44	+1.6
2,022,584	-		CCNA_01883	0.46	+0.9
2,022,595	+		CCNA_01883	0.46	-1.1
2,022,603	-		CCNA_01883	0.47	+0.7
2,022,603	-		CCNA_01883	0.47	-0.0
2,022,648	+		CCNA_01883	0.51	-1.0
2,022,653	+		CCNA_01883	0.51	-1.0
2,022,653	+		CCNA_01883	0.51	-1.3
2,022,653	+		CCNA_01883	0.51	-1.2
2,022,653	+		CCNA_01883	0.51	+0.8
2,022,661	-		CCNA_01883	0.52	-0.7
2,022,661	-		CCNA_01883	0.52	-1.1
2,022,661	-		CCNA_01883	0.52	-0.9
2,022,661	-		CCNA_01883	0.52	-0.5
2,022,709	+		CCNA_01883	0.56	-0.3
2,022,730	-		CCNA_01883	0.58	-1.4
2,022,748	-		CCNA_01883	0.60	-1.7
2,022,754	-		CCNA_01883	0.60	-0.3
2,022,765	-		CCNA_01883	0.61	+0.4
2,022,786	+		CCNA_01883	0.63	+0.2
2,022,806	-		CCNA_01883	0.64	-1.4
2,022,808	-		CCNA_01883	0.65	+1.1
2,022,856	-		CCNA_01883	0.69	+0.4
2,022,867	+		CCNA_01883	0.70	-0.1
2,022,913	+		CCNA_01883	0.74	-1.2
2,022,933	-		CCNA_01883	0.75	-1.0
2,022,955	+		CCNA_01883	0.77	-2.2
2,022,977	+		CCNA_01883	0.79	+0.6
2,022,977	+		CCNA_01883	0.79	+0.2
2,022,977	+		CCNA_01883	0.79	+0.2
2,022,977	+		CCNA_01883	0.79	-0.0
2,022,984	+		CCNA_01883	0.80	-0.3
2,023,015	+		CCNA_01883	0.82	-1.2
2,023,020	+		CCNA_01883	0.83	-0.2
2,023,043	+		CCNA_01883	0.85	+1.6
2,023,076	+		CCNA_01883	0.87	+0.7
2,023,084	-		CCNA_01883	0.88	+1.1
2,023,093	+		CCNA_01883	0.89	-0.0
2,023,112	+				+0.1
2,023,136	-				+0.2
2,023,215	+				+0.1
2,023,234	+				-1.0
2,023,273	+				-0.0
2,023,281	-				-1.1
2,023,283	+				+0.1
2,023,283	+				+0.1
2,023,291	-				+2.1
2,023,313	-				+1.8
2,023,321	+				-0.0
2,023,369	+		CCNA_01884	0.12	+0.8
2,023,387	-		CCNA_01884	0.14	-1.7
2,023,399	+		CCNA_01884	0.15	-1.1
2,023,451	+		CCNA_01884	0.19	-0.6
2,023,471	+		CCNA_01884	0.21	+1.1
2,023,479	-		CCNA_01884	0.22	+0.4
2,023,518	+		CCNA_01884	0.25	+0.4
2,023,518	+		CCNA_01884	0.25	-1.4
2,023,576	-		CCNA_01884	0.30	+1.8
2,023,618	+		CCNA_01884	0.34	-1.8
2,023,696	-		CCNA_01884	0.41	-1.2
2,023,696	-		CCNA_01884	0.41	-3.0
2,023,766	-		CCNA_01884	0.47	-0.0
2,023,776	-		CCNA_01884	0.48	+0.2
2,023,812	+		CCNA_01884	0.51	-1.1
2,023,812	+		CCNA_01884	0.51	-1.1
2,023,813	-		CCNA_01884	0.51	+0.7
2,023,820	-		CCNA_01884	0.51	+1.6
2,023,846	+		CCNA_01884	0.54	-0.5
2,023,867	+		CCNA_01884	0.55	+0.8
2,023,913	-		CCNA_01884	0.59	+0.4
2,023,922	+		CCNA_01884	0.60	-1.0
2,023,932	+		CCNA_01884	0.61	+0.3
2,024,020	+		CCNA_01884	0.69	+0.7
2,024,035	+		CCNA_01884	0.70	+0.1
2,024,061	+		CCNA_01884	0.72	+0.1
2,024,069	-		CCNA_01884	0.73	-0.9
2,024,069	-		CCNA_01884	0.73	-0.8
2,024,069	-		CCNA_01884	0.73	-0.1
2,024,069	-		CCNA_01884	0.73	-1.1
2,024,069	-		CCNA_01884	0.73	-0.2
2,024,120	-		CCNA_01884	0.77	-1.7
2,024,120	-		CCNA_01884	0.77	+1.0
2,024,158	+		CCNA_01884	0.81	-0.2
2,024,193	+		CCNA_01884	0.84	-1.1
2,024,193	+		CCNA_01884	0.84	+0.6
2,024,201	-		CCNA_01884	0.85	+2.4
2,024,211	-		CCNA_01884	0.85	-0.6