Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01877

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
2,014,918	+		CCNA_01876	0.52	+0.5
2,015,016	+		CCNA_01876	0.58	+1.6
2,015,053	+		CCNA_01876	0.60	-1.3
2,015,053	-		CCNA_01876	0.60	-1.6
2,015,059	+		CCNA_01876	0.61	+0.5
2,015,059	+		CCNA_01876	0.61	-1.7
2,015,059	+		CCNA_01876	0.61	-0.3
2,015,059	+		CCNA_01876	0.61	+0.0
2,015,067	-		CCNA_01876	0.61	+0.7
2,015,067	-		CCNA_01876	0.61	+0.7
2,015,067	-		CCNA_01876	0.61	-1.5
2,015,067	-		CCNA_01876	0.61	+2.5
2,015,067	-		CCNA_01876	0.61	+0.5
2,015,067	-		CCNA_01876	0.61	+2.0
2,015,142	-		CCNA_01876	0.66	-0.4
2,015,144	+		CCNA_01876	0.66	-0.2
2,015,152	-		CCNA_01876	0.66	-0.5
2,015,152	-		CCNA_01876	0.66	-1.4
2,015,164	+		CCNA_01876	0.67	+1.3
2,015,208	+		CCNA_01876	0.70	+0.4
2,015,247	+		CCNA_01876	0.72	-1.1
2,015,255	-		CCNA_01876	0.72	+1.9
2,015,255	-		CCNA_01876	0.72	+0.5
2,015,378	-		CCNA_01876	0.80	-0.9
2,015,403	-		CCNA_01876	0.81	-0.1
2,015,451	-		CCNA_01876	0.84	+0.6
2,015,474	-		CCNA_01876	0.85	-0.1
2,015,521	-		CCNA_01876	0.88	-0.1
2,015,524	-		CCNA_01876	0.88	+1.2
2,015,552	+				+0.9
2,015,560	-				+0.4
2,015,597	+				+0.1
2,015,602	+				+0.4
2,015,602	+				-0.3
2,015,628	+				-1.0
2,015,662	-				+0.2
2,015,683	-				-0.4
2,015,688	-				+0.6
2,015,739	+				-1.3
2,015,747	-				-0.1
2,015,764	-				-0.6
2,015,796	+				+1.2
2,015,806	-				+0.5
2,015,834	+				-1.4
2,015,846	+				+1.0
2,015,878	+				-1.2
2,015,884	+				-3.3
2,015,886	-				-0.9
2,015,889	+				+1.3
2,015,889	+				+0.5
2,015,889	+				-0.4
2,015,897	-				-0.5
2,015,897	-				-0.4
2,015,897	-				+1.1
2,015,960	-				-1.6
2,015,963	+				+0.6
2,016,005	+		CCNA_01877	0.10	-0.9
2,016,050	+		CCNA_01877	0.16	-1.9
2,016,058	-		CCNA_01877	0.17	+0.3
2,016,058	-		CCNA_01877	0.17	-1.3
2,016,058	-		CCNA_01877	0.17	-1.2
2,016,083	+		CCNA_01877	0.20	+0.3
2,016,091	-		CCNA_01877	0.20	+1.9
2,016,100	+		CCNA_01877	0.21	-2.5
2,016,134	+		CCNA_01877	0.25	+0.9
2,016,180	+		CCNA_01877	0.31	-2.3
2,016,264	+		CCNA_01877	0.41	+1.4
2,016,270	+		CCNA_01877	0.41	-0.1
2,016,290	+		CCNA_01877	0.44	-0.7
2,016,290	+		CCNA_01877	0.44	-0.1
2,016,290	+		CCNA_01877	0.44	-3.0
2,016,290	+		CCNA_01877	0.44	-1.0
2,016,290	+		CCNA_01877	0.44	-0.6
2,016,298	-		CCNA_01877	0.44	-0.2
2,016,298	-		CCNA_01877	0.44	-0.5
2,016,330	+		CCNA_01877	0.48	-2.0
2,016,355	+		CCNA_01877	0.51	-0.1
2,016,388	+		CCNA_01877	0.55	-1.0
2,016,396	+		CCNA_01877	0.56	-0.6
2,016,396	-		CCNA_01877	0.56	+1.6
2,016,473	+		CCNA_01877	0.65	+0.3
2,016,475	+		CCNA_01877	0.65	-1.0
2,016,504	-		CCNA_01877	0.68	-1.8
2,016,516	-		CCNA_01877	0.70	-0.8
2,016,529	+		CCNA_01877	0.71	-0.9
2,016,537	-		CCNA_01877	0.72	-0.2
2,016,556	+		CCNA_01877	0.74	-1.1
2,016,583	-		CCNA_01877	0.78	+0.1
2,016,593	-		CCNA_01877	0.79	+0.9
2,016,593	-		CCNA_01877	0.79	-0.6
2,016,595	+		CCNA_01877	0.79	+0.3
2,016,595	+		CCNA_01877	0.79	-0.7
2,016,640	+		CCNA_01877	0.84	+0.1
2,016,655	+		CCNA_01877	0.86	-1.6
2,016,655	+		CCNA_01877	0.86	-1.4
2,016,674	+		CCNA_01877	0.88	+1.0
2,016,690	+				-2.6
2,016,751	-				-1.2
2,016,769	+				-1.2
2,016,769	+				+0.6
2,016,769	+				-0.3
2,016,777	-				-0.9
2,016,777	-				-0.5
2,016,830	-				-0.1
2,016,857	-				-0.8
2,016,866	-				-0.8
2,016,886	-				-0.9
2,016,894	+				-0.4
2,016,894	+				+0.3
2,016,899	+				+0.3
2,016,909	+				-0.1
2,016,914	+				+1.9
2,016,917	-				+0.2
2,016,917	-				-0.3
2,016,922	-				-1.3
2,016,942	+		CCNA_01878	0.10	-0.5
2,017,033	-		CCNA_01878	0.16	+0.5
2,017,035	+		CCNA_01878	0.16	+1.2
2,017,035	+		CCNA_01878	0.16	-0.9
2,017,035	+		CCNA_01878	0.16	-1.5
2,017,043	-		CCNA_01878	0.17	+3.2
2,017,063	-		CCNA_01878	0.18	-0.2
2,017,092	-		CCNA_01878	0.20	+1.9
2,017,128	-		CCNA_01878	0.22	+0.6
2,017,314	+		CCNA_01878	0.33	-0.1
2,017,364	+		CCNA_01878	0.37	+1.6
2,017,364	+		CCNA_01878	0.37	-0.3
2,017,364	+		CCNA_01878	0.37	+1.4
2,017,364	+		CCNA_01878	0.37	-0.9
2,017,369	+		CCNA_01878	0.37	+0.4
2,017,372	-		CCNA_01878	0.37	+0.3
2,017,377	-		CCNA_01878	0.37	-0.5
2,017,377	-		CCNA_01878	0.37	-0.8
2,017,379	-		CCNA_01878	0.38	-1.5
2,017,395	+		CCNA_01878	0.39	-0.4
2,017,403	-		CCNA_01878	0.39	-1.0
2,017,410	+		CCNA_01878	0.39	+1.4
2,017,437	+		CCNA_01878	0.41	+0.0
2,017,437	+		CCNA_01878	0.41	-0.9
2,017,445	-		CCNA_01878	0.42	-0.5
2,017,445	-		CCNA_01878	0.42	-1.1
2,017,447	+		CCNA_01878	0.42	+1.3
2,017,447	+		CCNA_01878	0.42	+1.7
2,017,447	+		CCNA_01878	0.42	+0.5
2,017,447	+		CCNA_01878	0.42	+1.0
2,017,447	+		CCNA_01878	0.42	+1.8
2,017,447	+		CCNA_01878	0.42	+1.3
2,017,447	+		CCNA_01878	0.42	+1.5
2,017,455	-		CCNA_01878	0.42	-0.6
2,017,457	+		CCNA_01878	0.42	+0.7
2,017,457	+		CCNA_01878	0.42	+0.7
2,017,457	+		CCNA_01878	0.42	-0.3
2,017,457	+		CCNA_01878	0.42	-0.5
2,017,488	-		CCNA_01878	0.44	+0.3
2,017,495	+		CCNA_01878	0.45	+1.5
2,017,495	+		CCNA_01878	0.45	+0.1
2,017,503	-		CCNA_01878	0.45	+0.0
2,017,503	-		CCNA_01878	0.45	+0.1
2,017,503	-		CCNA_01878	0.45	+0.4
2,017,503	-		CCNA_01878	0.45	+0.6
2,017,503	-		CCNA_01878	0.45	-1.7
2,017,503	-		CCNA_01878	0.45	-0.7
2,017,503	-		CCNA_01878	0.45	+0.2
2,017,524	+		CCNA_01878	0.47	-0.8
2,017,525	-		CCNA_01878	0.47	-1.5
2,017,532	-		CCNA_01878	0.47	-0.9
2,017,583	+		CCNA_01878	0.50	+0.5
2,017,591	-		CCNA_01878	0.51	-0.4
2,017,614	-		CCNA_01878	0.52	-0.1
2,017,655	+		CCNA_01878	0.55	-0.8
2,017,658	-		CCNA_01878	0.55	+2.7
2,017,672	-		CCNA_01878	0.56	-1.0
2,017,706	+		CCNA_01878	0.58	-0.2
2,017,706	+		CCNA_01878	0.58	-1.4
2,017,706	+		CCNA_01878	0.58	-0.1
2,017,714	-		CCNA_01878	0.58	+0.2
2,017,714	-		CCNA_01878	0.58	+0.5
2,017,714	-		CCNA_01878	0.58	-1.5
2,017,714	-		CCNA_01878	0.58	+0.5
2,017,744	+		CCNA_01878	0.60	+1.0
2,017,760	+		CCNA_01878	0.61	+1.2