Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01577

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
1,692,646	+		CCNA_01576	0.26	+2.3
1,692,654	-		CCNA_01576	0.27	-0.5
1,692,654	-		CCNA_01576	0.27	+1.0
1,692,686	-		CCNA_01576	0.29	-0.0
1,692,731	-		CCNA_01576	0.33	+0.5
1,692,752	-		CCNA_01576	0.34	-0.2
1,692,781	+		CCNA_01576	0.36	+0.2
1,692,789	+		CCNA_01576	0.37	+0.8
1,692,789	+		CCNA_01576	0.37	-0.8
1,692,789	-		CCNA_01576	0.37	+0.2
1,692,789	-		CCNA_01576	0.37	+0.8
1,692,796	+		CCNA_01576	0.38	+1.7
1,692,797	-		CCNA_01576	0.38	-0.2
1,692,836	-		CCNA_01576	0.41	+0.5
1,692,874	+		CCNA_01576	0.44	+0.4
1,692,874	+		CCNA_01576	0.44	+2.7
1,692,909	+		CCNA_01576	0.46	-0.4
1,692,937	+		CCNA_01576	0.48	+1.3
1,692,945	-		CCNA_01576	0.49	-1.2
1,692,957	+		CCNA_01576	0.50	-0.1
1,692,995	+		CCNA_01576	0.53	-0.7
1,693,008	-		CCNA_01576	0.54	-0.0
1,693,029	+		CCNA_01576	0.56	-0.2
1,693,029	+		CCNA_01576	0.56	-1.4
1,693,037	-		CCNA_01576	0.56	+0.3
1,693,037	-		CCNA_01576	0.56	-0.9
1,693,037	-		CCNA_01576	0.56	-1.5
1,693,037	-		CCNA_01576	0.56	+1.3
1,693,037	-		CCNA_01576	0.56	+1.4
1,693,042	-		CCNA_01576	0.57	+0.8
1,693,042	-		CCNA_01576	0.57	-1.5
1,693,071	+		CCNA_01576	0.59	+1.6
1,693,072	+		CCNA_01576	0.59	-0.3
1,693,080	-		CCNA_01576	0.59	-0.8
1,693,080	-		CCNA_01576	0.59	-0.2
1,693,080	-		CCNA_01576	0.59	-0.3
1,693,080	-		CCNA_01576	0.59	+0.3
1,693,085	-		CCNA_01576	0.60	-0.3
1,693,200	-		CCNA_01576	0.69	+0.3
1,693,251	+		CCNA_01576	0.73	-0.7
1,693,251	+		CCNA_01576	0.73	+0.8
1,693,281	-		CCNA_01576	0.75	+0.6
1,693,305	+		CCNA_01576	0.77	+1.3
1,693,328	-		CCNA_01576	0.79	-1.0
1,693,355	+		CCNA_01576	0.81	-0.8
1,693,362	-				+1.3
1,693,362	-		CCNA_01576	0.81	-0.2
1,693,363	-		CCNA_01576	0.81	-0.5
1,693,381	+		CCNA_01576	0.83	+0.0
1,693,394	-		CCNA_01576	0.84	+1.1
1,693,491	+				-1.6
1,693,504	+				+0.1
1,693,548	-				-1.6
1,693,567	-				+1.7
1,693,579	+				+0.2
1,693,587	-				+0.9
1,693,622	-				-0.6
1,693,653	+				-0.1
1,693,660	+				+0.7
1,693,660	+				-0.9
1,693,668	-				-1.4
1,693,668	-				-0.9
1,693,670	+				-0.9
1,693,866	+		CCNA_01577	0.29	-0.1
1,693,866	+		CCNA_01577	0.29	+0.7
1,693,874	-		CCNA_01577	0.30	+1.5
1,693,884	-				+2.3
1,693,978	+		CCNA_01577	0.42	+0.2
1,694,027	-		CCNA_01577	0.48	+2.7
1,694,076	-		CCNA_01577	0.54	-0.2
1,694,086	+		CCNA_01577	0.55	-0.4
1,694,121	-		CCNA_01577	0.60	+1.7
1,694,152	+		CCNA_01577	0.63	+1.5
1,694,160	-		CCNA_01577	0.64	-0.3
1,694,190	-		CCNA_01577	0.68	-0.9
1,694,226	-		CCNA_01577	0.73	+1.1
1,694,266	-		CCNA_01577	0.77	+1.9
1,694,301	+		CCNA_01577	0.82	-0.2
1,694,301	+		CCNA_01577	0.82	+0.9
1,694,301	+		CCNA_01577	0.82	+0.4
1,694,301	+		CCNA_01577	0.82	+0.4
1,694,309	-		CCNA_01577	0.83	+0.6
1,694,311	+		CCNA_01577	0.83	+1.9
1,694,336	-		CCNA_01577	0.86	-0.1
1,694,495	-				-1.1
1,694,578	+				-1.6
1,694,578	+				+3.3
1,694,610	-				+0.7
1,694,684	+				-1.3
1,694,705	+				+0.2
1,694,722	+		CCNA_01578	0.12	-0.2
1,694,731	+		CCNA_01578	0.14	-1.0
1,694,731	+		CCNA_01578	0.14	-0.3
1,694,772	+		CCNA_01578	0.26	-0.7
1,694,772	+		CCNA_01578	0.26	+0.1
1,694,794	+		CCNA_01578	0.32	+0.1
1,694,807	+		CCNA_01578	0.35	+0.0
1,694,815	-		CCNA_01578	0.37	-0.4
1,694,866	+		CCNA_01578	0.52	+0.7
1,694,893	+		CCNA_01578	0.59	-0.5
1,694,893	+		CCNA_01578	0.59	-0.8
1,694,898	+		CCNA_01578	0.60	-1.0
1,694,909	+		CCNA_01578	0.63	+0.0
1,694,919	+		CCNA_01578	0.66	-0.1
1,694,919	+		CCNA_01578	0.66	+0.9
1,694,919	+		CCNA_01578	0.66	-1.0
1,694,919	+		CCNA_01578	0.66	-0.9
1,694,975	+		CCNA_01578	0.82	+0.0
1,695,087	+				-0.9
1,695,087	-				-0.6
1,695,090	-				+0.7
1,695,120	-				+0.3
1,695,152	+				+0.9
1,695,152	+				+0.5
1,695,160	+				-0.1
1,695,160	-				-0.7
1,695,161	-				-0.4
1,695,161	-				-0.8
1,695,207	+				-0.3
1,695,207	+				+0.9
1,695,252	+				-2.0
1,695,252	+				-2.9
1,695,252	+				-0.1
1,695,252	+				+0.6
1,695,259	-				+3.8
1,695,260	-				-0.5
1,695,260	-				+0.9
1,695,260	-				+1.3
1,695,260	-				+0.0
1,695,293	+				+1.3
1,695,311	+				-0.6
1,695,343	+				-1.9
1,695,380	+				+0.1
1,695,382	-				-0.3
1,695,422	-				-0.5
1,695,422	-				-1.1
1,695,422	-				+1.3
1,695,447	+				-1.0