Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01566

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
1,682,038	+				-1.9
1,682,044	+				-0.5
1,682,063	+				+0.2
1,682,110	-				+0.9
1,682,110	-				-0.8
1,682,110	-				+0.4
1,682,110	-				+0.8
1,682,124	+				-0.0
1,682,124	+				-0.3
1,682,148	-				+0.6
1,682,177	-				+0.9
1,682,250	+				+0.9
1,682,324	+				+1.5
1,682,332	-				+1.8
1,682,332	-				-0.9
1,682,332	-				-1.0
1,682,365	+				-0.8
1,682,366	-				+1.5
1,682,368	+				-2.4
1,682,404	+				-1.0
1,682,480	+				-0.7
1,682,480	+				+0.4
1,682,485	+				+0.4
1,682,485	+				+1.1
1,682,485	+				+0.8
1,682,488	-				-0.3
1,682,493	-				-1.4
1,682,493	-				-0.0
1,682,493	-				-1.4
1,682,556	-				+2.7
1,682,556	-				+0.2
1,682,560	-				-0.1
1,682,566	-				-0.6
1,682,566	-				-1.8
1,682,566	-				+0.1
1,682,566	-				+1.0
1,682,566	-				-0.5
1,682,566	-				+0.1
1,682,566	-				+1.0
1,682,645	+				+0.5
1,682,645	+				-1.8
1,682,672	+				+1.4
1,682,672	+				-1.5
1,682,672	+				-0.7
1,682,680	-				+0.4
1,682,707	+				-0.6
1,682,707	+				+0.4
1,682,707	+				+2.7
1,682,714	+				-2.3
1,682,715	-				+0.3
1,682,715	-				+0.6
1,682,715	-				-0.5
1,682,715	-				-1.1
1,682,715	-				-0.3
1,682,715	-				+1.3
1,682,715	-				-0.6
1,682,731	+				-2.2
1,682,734	-				+0.6
1,682,739	-				+0.7
1,682,739	-				-0.9
1,682,739	-				-1.2
1,682,843	+				-1.8
1,682,843	+				+2.0
1,682,843	+				-1.8
1,682,879	+				+2.0
1,682,879	+				-0.1
1,682,879	+				+0.6
1,682,882	-				+1.0
1,682,887	-				-0.4
1,682,887	-				-1.2
1,682,922	-				-1.6
1,683,016	+				-0.1
1,683,024	-				+1.8
1,683,058	+		CCNA_01566	0.20	-1.4
1,683,058	+		CCNA_01566	0.20	-0.8
1,683,069	-		CCNA_01566	0.23	+0.6
1,683,128	+		CCNA_01566	0.42	-1.4
1,683,183	-		CCNA_01566	0.60	-1.6
1,683,200	+		CCNA_01566	0.65	-1.0
1,683,221	+		CCNA_01566	0.72	-0.2
1,683,249	+		CCNA_01566	0.81	+1.5
1,683,271	-		CCNA_01566	0.88	-0.2
1,683,302	+				-0.0
1,683,327	+				-0.4
1,683,337	+				-0.4
1,683,443	-				-0.7
1,683,507	+				+0.1
1,683,515	-				-1.1
1,683,515	-				+1.8
1,683,515	-				+0.7
1,683,529	+				-0.4
1,683,539	+				+0.4
1,683,547	-				+0.4
1,683,604	+				+2.0
1,683,607	-				-0.3
1,683,609	+				+0.8
1,683,617	-				+0.1
1,683,646	-				+0.8
1,683,664	-				+0.1
1,683,664	-				-0.3
1,683,688	-		CCNA_01567	0.11	+0.3
1,683,693	+		CCNA_01567	0.12	-1.7
1,683,693	+		CCNA_01567	0.12	+1.1
1,683,693	+		CCNA_01567	0.12	+1.5
1,683,701	-		CCNA_01567	0.12	+0.4
1,683,701	-		CCNA_01567	0.12	+1.0
1,683,924	+		CCNA_01567	0.33	+0.1
1,683,924	+		CCNA_01567	0.33	+0.4
1,683,986	+		CCNA_01567	0.39	-0.3
1,683,989	-		CCNA_01567	0.39	+0.7
1,683,989	-		CCNA_01567	0.39	-0.2
1,684,074	+		CCNA_01567	0.47	-0.0
1,684,074	+		CCNA_01567	0.47	-0.4
1,684,100	+		CCNA_01567	0.49	-0.5
1,684,106	+		CCNA_01567	0.50	+0.1
1,684,106	+		CCNA_01567	0.50	-1.0
1,684,109	-		CCNA_01567	0.50	-0.7
1,684,114	-		CCNA_01567	0.50	+1.7
1,684,210	+		CCNA_01567	0.59	-0.8
1,684,218	-		CCNA_01567	0.60	+0.7
1,684,233	+		CCNA_01567	0.61	-0.0
1,684,241	-				+1.3
1,684,241	-		CCNA_01567	0.62	+1.3
1,684,241	-		CCNA_01567	0.62	+0.1
1,684,265	+		CCNA_01567	0.64	+0.8
1,684,265	+		CCNA_01567	0.64	+0.3
1,684,265	+		CCNA_01567	0.64	-1.6
1,684,265	+		CCNA_01567	0.64	-2.4
1,684,265	+		CCNA_01567	0.64	+2.6
1,684,273	-		CCNA_01567	0.65	+0.2
1,684,273	-		CCNA_01567	0.65	+2.3
1,684,273	-		CCNA_01567	0.65	-0.0
1,684,273	-		CCNA_01567	0.65	+1.3
1,684,275	+		CCNA_01567	0.65	+0.5
1,684,275	+		CCNA_01567	0.65	-0.9
1,684,275	+		CCNA_01567	0.65	+1.7
1,684,275	+		CCNA_01567	0.65	-1.2
1,684,275	+		CCNA_01567	0.65	-1.3
1,684,275	+		CCNA_01567	0.65	+0.4
1,684,275	+		CCNA_01567	0.65	-1.6
1,684,275	+		CCNA_01567	0.65	+0.0
1,684,275	+		CCNA_01567	0.65	-0.8
1,684,278	-		CCNA_01567	0.65	-0.3
1,684,280	+		CCNA_01567	0.66	-0.1
1,684,283	-		CCNA_01567	0.66	-0.3
1,684,283	-		CCNA_01567	0.66	-1.1
1,684,288	-		CCNA_01567	0.66	-0.2
1,684,288	-		CCNA_01567	0.66	-0.7
1,684,288	-		CCNA_01567	0.66	+2.7
1,684,288	-		CCNA_01567	0.66	+2.1
1,684,290	+		CCNA_01567	0.67	-0.5