Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01427

Experiment: PYE with Vancomycin 0.007 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Vancomycin 0.007 mg/ml
1,543,535	-				+1.3
1,543,535	-				+1.4
1,543,579	+				-0.4
1,543,587	-				+1.8
1,543,590	+				+1.2
1,543,598	-				+1.6
1,543,598	-				-0.5
1,543,605	+				+0.5
1,543,608	-				-1.7
1,543,620	+				+0.7
1,543,620	+				+2.7
1,543,620	+				+1.5
1,543,628	-				+0.2
1,543,628	-				+0.9
1,543,639	+				-0.5
1,543,686	+				+0.2
1,543,694	-		CCNA_01426	0.10	-1.3
1,543,694	-		CCNA_01426	0.10	-1.3
1,543,734	-		CCNA_01426	0.17	-1.5
1,543,843	+		CCNA_01426	0.37	-2.1
1,543,843	+		CCNA_01426	0.37	-0.5
1,543,851	-		CCNA_01426	0.38	+0.3
1,543,851	-		CCNA_01426	0.38	+1.6
1,543,851	-		CCNA_01426	0.38	+0.1
1,543,851	-		CCNA_01426	0.38	+1.2
1,543,851	-		CCNA_01426	0.38	+0.3
1,543,851	-		CCNA_01426	0.38	-0.2
1,543,855	+		CCNA_01426	0.39	+1.1
1,543,863	-		CCNA_01426	0.41	+0.1
1,543,863	-		CCNA_01426	0.41	-0.7
1,543,865	+		CCNA_01426	0.41	-0.3
1,543,897	-		CCNA_01426	0.47	-1.4
1,543,907	-		CCNA_01426	0.48	-0.3
1,543,937	-		CCNA_01426	0.54	-1.0
1,543,943	+		CCNA_01426	0.55	-0.2
1,543,947	-		CCNA_01426	0.56	-1.4
1,543,951	-		CCNA_01426	0.56	-0.5
1,543,971	-		CCNA_01426	0.60	+0.5
1,543,982	+		CCNA_01426	0.62	-1.1
1,543,993	+		CCNA_01426	0.64	+0.1
1,544,039	+		CCNA_01426	0.72	-0.6
1,544,091	+		CCNA_01426	0.82	-1.7
1,544,099	-		CCNA_01426	0.83	-0.2
1,544,114	-		CCNA_01426	0.86	-1.2
1,544,380	+				-1.0
1,544,380	+				-1.7
1,544,388	-				+2.2
1,544,503	-				-0.6
1,544,591	-		CCNA_01427	0.28	-2.6
1,544,605	+		CCNA_01427	0.30	-2.0
1,544,613	+		CCNA_01427	0.32	-0.8
1,544,629	-		CCNA_01427	0.35	+1.6
1,544,706	-		CCNA_01427	0.51	-1.7
1,544,737	-		CCNA_01427	0.58	-1.1
1,544,742	-		CCNA_01427	0.59	-0.4
1,544,766	+		CCNA_01427	0.64	+1.2
1,544,801	-		CCNA_01427	0.71	+0.8
1,544,861	-		CCNA_01427	0.83	+0.2
1,544,974	+				-1.8
1,544,997	-				-3.2
1,544,998	-				-2.9
1,545,015	-				-2.3
1,545,115	+		CCNA_01429	0.10	+0.2
1,545,118	+		CCNA_01429	0.11	+0.6
1,545,123	-		CCNA_01429	0.11	+0.8
1,545,126	-		CCNA_01429	0.12	+0.7
1,545,159	+		CCNA_01429	0.18	+0.3
1,545,165	+		CCNA_01429	0.19	-0.6
1,545,165	+		CCNA_01429	0.19	-0.1
1,545,188	+		CCNA_01429	0.24	+0.1
1,545,205	+		CCNA_01429	0.27	-0.0
1,545,245	+		CCNA_01429	0.34	+0.4
1,545,253	-		CCNA_01429	0.36	-1.3
1,545,262	+		CCNA_01429	0.38	-1.9
1,545,281	+		CCNA_01429	0.41	+0.4
1,545,324	+		CCNA_01429	0.49	-0.6
1,545,344	+		CCNA_01429	0.53	-0.2
1,545,347	-		CCNA_01429	0.54	-0.2
1,545,391	+		CCNA_01429	0.62	+1.5
1,545,391	+		CCNA_01429	0.62	+0.6
1,545,391	+		CCNA_01429	0.62	-0.1
1,545,391	+		CCNA_01429	0.62	+0.7
1,545,391	+		CCNA_01429	0.62	-0.1
1,545,391	+		CCNA_01429	0.62	+0.8
1,545,398	+		CCNA_01429	0.63	-0.1
1,545,398	+		CCNA_01429	0.63	+0.5
1,545,399	-		CCNA_01429	0.63	+0.4
1,545,399	-		CCNA_01429	0.63	+1.6
1,545,406	-		CCNA_01429	0.65	+0.3
1,545,443	+		CCNA_01429	0.72	-0.3
1,545,465	+		CCNA_01429	0.76	-0.0
1,545,473	-		CCNA_01429	0.77	+2.4
1,545,473	-		CCNA_01429	0.77	+1.0
1,545,514	+		CCNA_01429	0.85	+0.6
1,545,569	+				-0.0
1,545,579	+				-0.2
1,545,586	+				+0.2
1,545,586	+				+0.8
1,545,586	+				-0.1
1,545,586	+				-1.4
1,545,594	-				-0.6
1,545,598	+				-0.3
1,545,628	+				+0.0
1,545,630	+				+0.4
1,545,660	+		CCNA_01430	0.15	+0.8
1,545,665	+		CCNA_01430	0.16	-0.6
1,545,665	+		CCNA_01430	0.16	-1.5
1,545,665	+		CCNA_01430	0.16	-1.3
1,545,670	+		CCNA_01430	0.17	-1.2
1,545,673	-		CCNA_01430	0.18	+0.5
1,545,675	+		CCNA_01430	0.18	+0.5
1,545,675	+		CCNA_01430	0.18	-1.2
1,545,683	-		CCNA_01430	0.20	-0.6
1,545,696	+		CCNA_01430	0.22	+3.5
1,545,702	-		CCNA_01430	0.23	+2.2
1,545,710	+		CCNA_01430	0.25	-0.9
1,545,710	+		CCNA_01430	0.25	+1.0
1,545,718	+		CCNA_01430	0.26	-1.9
1,545,718	+		CCNA_01430	0.26	-0.1
1,545,718	-		CCNA_01430	0.26	+0.4
1,545,718	-		CCNA_01430	0.26	-0.0
1,545,718	-		CCNA_01430	0.26	+2.6
1,545,718	-		CCNA_01430	0.26	+0.0
1,545,725	+		CCNA_01430	0.27	+1.6
1,545,732	+				+2.6
1,545,733	-		CCNA_01430	0.29	-0.4
1,545,738	+		CCNA_01430	0.30	-0.4
1,545,752	-		CCNA_01430	0.32	+1.2
1,545,788	+		CCNA_01430	0.39	+1.6
1,545,793	+		CCNA_01430	0.40	-1.2
1,545,798	+		CCNA_01430	0.41	+3.1
1,545,798	+		CCNA_01430	0.41	-0.2
1,545,801	-		CCNA_01430	0.41	+0.0
1,545,894	-		CCNA_01430	0.59	+2.2
1,545,894	-		CCNA_01430	0.59	+0.9
1,545,894	-		CCNA_01430	0.59	-1.7