Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS36145 and BPHYT_RS36150 are separated by 514 nucleotides BPHYT_RS36150 and BPHYT_RS36155 are separated by 5 nucleotides BPHYT_RS36155 and BPHYT_RS36160 are separated by 78 nucleotides
BPHYT_RS36145: BPHYT_RS36145 - hypothetical protein, at 46,724 to 46,978
_RS36145
BPHYT_RS36150: BPHYT_RS36150 - hypothetical protein, at 47,493 to 47,726
_RS36150
BPHYT_RS36155: BPHYT_RS36155 - hypothetical protein, at 47,732 to 47,947
_RS36155
BPHYT_RS36160: BPHYT_RS36160 - hypothetical protein, at 48,026 to 48,514
_RS36160
Position (kb)
47
48 Strain fitness (log2 ratio)
-2
-1
0
1 at 46.793 kb on + strand, within BPHYT_RS36145 at 47.023 kb on + strand at 47.024 kb on - strand at 47.179 kb on + strand at 47.179 kb on + strand at 47.180 kb on - strand at 47.533 kb on + strand, within BPHYT_RS36150 at 47.660 kb on + strand, within BPHYT_RS36150 at 47.950 kb on - strand at 47.995 kb on + strand at 47.995 kb on + strand at 48.023 kb on - strand at 48.023 kb on - strand at 48.023 kb on - strand at 48.023 kb on - strand at 48.312 kb on - strand, within BPHYT_RS36160 at 48.464 kb on - strand, within BPHYT_RS36160 at 48.464 kb on - strand, within BPHYT_RS36160
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 46,793 + BPHYT_RS36145 0.27 -0.1 47,023 + -0.1 47,024 - -0.4 47,179 + -0.8 47,179 + +0.5 47,180 - -0.1 47,533 + BPHYT_RS36150 0.17 -2.0 47,660 + BPHYT_RS36150 0.71 -0.9 47,950 - -0.1 47,995 + -2.6 47,995 + +0.9 48,023 - +0.9 48,023 - -0.1 48,023 - +1.6 48,023 - +0.1 48,312 - BPHYT_RS36160 0.58 +0.6 48,464 - BPHYT_RS36160 0.90 -1.5 48,464 - BPHYT_RS36160 0.90 -0.0
Or see this region's nucleotide sequence