Experiment: LB 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1336 and Ac3H11_1337 overlap by 4 nucleotides Ac3H11_1337 and Ac3H11_1338 are separated by 864 nucleotides
Ac3H11_1336 - Ferrous iron transport protein B, at 23,778 to 25,703
_1336
Ac3H11_1337 - Ferrous iron transport protein, at 25,700 to 26,038
_1337
Ac3H11_1338 - Mobile element protein, at 26,903 to 27,022
_1338
Position (kb)
25
26
27 Strain fitness (log2 ratio)
-2
-1
0
1 at 25.272 kb on + strand, within Ac3H11_1336 at 25.272 kb on + strand, within Ac3H11_1336 at 25.273 kb on - strand, within Ac3H11_1336 at 25.273 kb on - strand, within Ac3H11_1336 at 25.570 kb on + strand at 25.570 kb on + strand at 25.570 kb on + strand at 25.570 kb on + strand at 25.571 kb on - strand at 25.571 kb on - strand at 25.645 kb on - strand at 26.199 kb on + strand at 26.199 kb on + strand at 26.199 kb on + strand at 26.199 kb on + strand at 26.200 kb on - strand at 26.200 kb on - strand at 26.200 kb on - strand at 26.200 kb on - strand at 26.200 kb on - strand at 26.304 kb on + strand at 26.370 kb on + strand at 26.370 kb on + strand at 26.371 kb on - strand at 26.468 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.477 kb on + strand at 26.478 kb on - strand at 26.478 kb on - strand at 26.520 kb on + strand at 26.520 kb on + strand at 26.521 kb on - strand at 26.521 kb on - strand at 26.527 kb on - strand at 26.538 kb on + strand at 26.538 kb on + strand at 26.538 kb on + strand at 26.538 kb on + strand at 26.539 kb on - strand at 26.700 kb on - strand at 26.731 kb on + strand at 26.731 kb on + strand at 26.731 kb on + strand at 26.732 kb on - strand at 26.742 kb on + strand at 26.742 kb on + strand at 26.743 kb on - strand at 26.755 kb on + strand at 26.756 kb on - strand at 26.826 kb on + strand at 26.826 kb on + strand at 26.826 kb on + strand at 26.827 kb on - strand at 26.827 kb on - strand at 26.827 kb on - strand at 26.827 kb on - strand at 26.828 kb on + strand at 26.828 kb on + strand at 26.828 kb on + strand at 26.829 kb on - strand at 26.829 kb on - strand at 26.829 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB 30C remove 25,272 + Ac3H11_1336 0.78 -0.3 25,272 + Ac3H11_1336 0.78 -0.1 25,273 - Ac3H11_1336 0.78 -0.4 25,273 - Ac3H11_1336 0.78 +0.5 25,570 + -0.5 25,570 + -0.5 25,570 + -0.5 25,570 + +1.1 25,571 - -0.7 25,571 - +0.8 25,645 - +0.2 26,199 + +0.0 26,199 + +0.6 26,199 + +0.5 26,199 + -2.5 26,200 - +0.2 26,200 - -0.7 26,200 - +0.2 26,200 - +1.0 26,200 - +1.1 26,304 + -0.1 26,370 + +0.5 26,370 + +0.4 26,371 - +0.2 26,468 + +0.1 26,477 + -0.1 26,477 + +0.1 26,477 + +0.5 26,477 + +0.0 26,477 + +0.0 26,477 + -0.0 26,477 + +0.3 26,477 + -0.7 26,478 - +0.3 26,478 - -1.5 26,520 + +0.1 26,520 + +0.3 26,521 - -0.2 26,521 - +0.6 26,527 - +0.2 26,538 + -0.4 26,538 + +0.1 26,538 + +0.1 26,538 + +0.5 26,539 - +0.8 26,700 - -0.1 26,731 + +0.2 26,731 + -0.3 26,731 + +0.2 26,732 - +0.7 26,742 + -0.4 26,742 + -0.2 26,743 - -1.2 26,755 + +0.2 26,756 - +0.9 26,826 + +0.4 26,826 + +0.5 26,826 + -0.5 26,827 - -1.3 26,827 - -0.2 26,827 - -0.5 26,827 - +0.1 26,828 + +0.1 26,828 + -0.2 26,828 + -0.2 26,829 - -0.7 26,829 - +0.2 26,829 - -0.0
Or see this region's nucleotide sequence