Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00580 and AZOBR_RS00585 are separated by 44 nucleotides
AZOBR_RS00580: AZOBR_RS00580 - aminoglycoside phosphotransferase, at 115,253 to 116,266
_RS00580
AZOBR_RS00585: AZOBR_RS00585 - mannose-1-phosphate guanylyltransferase, at 116,311 to 117,048
_RS00585
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 115.353 kb on - strand at 115.583 kb on + strand, within AZOBR_RS00580 at 115.712 kb on + strand, within AZOBR_RS00580 at 115.712 kb on + strand, within AZOBR_RS00580 at 115.712 kb on + strand, within AZOBR_RS00580 at 115.712 kb on + strand, within AZOBR_RS00580 at 115.712 kb on + strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand at 115.832 kb on + strand, within AZOBR_RS00580 at 115.832 kb on + strand, within AZOBR_RS00580 at 115.833 kb on - strand, within AZOBR_RS00580 at 115.833 kb on - strand, within AZOBR_RS00580 at 116.049 kb on - strand, within AZOBR_RS00580 at 116.127 kb on - strand, within AZOBR_RS00580 at 116.127 kb on - strand, within AZOBR_RS00580 at 116.268 kb on + strand at 116.268 kb on + strand at 116.269 kb on - strand at 116.269 kb on - strand at 116.269 kb on - strand at 116.488 kb on + strand, within AZOBR_RS00585 at 116.488 kb on + strand, within AZOBR_RS00585 at 116.488 kb on + strand, within AZOBR_RS00585 at 116.489 kb on - strand, within AZOBR_RS00585 at 116.623 kb on + strand, within AZOBR_RS00585 at 116.624 kb on - strand, within AZOBR_RS00585 at 116.624 kb on - strand, within AZOBR_RS00585 at 116.752 kb on + strand, within AZOBR_RS00585 at 116.752 kb on + strand, within AZOBR_RS00585 at 116.753 kb on - strand, within AZOBR_RS00585 at 116.753 kb on - strand, within AZOBR_RS00585 at 116.771 kb on - strand, within AZOBR_RS00585 at 116.834 kb on - strand, within AZOBR_RS00585 at 117.133 kb on + strand at 117.133 kb on + strand at 117.133 kb on + strand at 117.134 kb on - strand at 117.134 kb on - strand at 117.157 kb on - strand at 117.650 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 115,353 - -0.0 115,583 + AZOBR_RS00580 0.33 +0.7 115,712 + AZOBR_RS00580 0.45 +0.0 115,712 + AZOBR_RS00580 0.45 +0.3 115,712 + AZOBR_RS00580 0.45 -0.5 115,712 + AZOBR_RS00580 0.45 -0.0 115,712 + AZOBR_RS00580 0.45 -0.3 115,713 - AZOBR_RS00580 0.45 -0.6 115,713 - AZOBR_RS00580 0.45 -0.9 115,713 - AZOBR_RS00580 0.45 -0.1 115,713 - AZOBR_RS00580 0.45 -0.6 115,713 - AZOBR_RS00580 0.45 +0.5 115,713 - AZOBR_RS00580 0.45 -0.6 115,713 - +3.1 115,832 + AZOBR_RS00580 0.57 -0.2 115,832 + AZOBR_RS00580 0.57 -0.4 115,833 - AZOBR_RS00580 0.57 -0.3 115,833 - AZOBR_RS00580 0.57 +0.5 116,049 - AZOBR_RS00580 0.79 -1.5 116,127 - AZOBR_RS00580 0.86 +0.1 116,127 - AZOBR_RS00580 0.86 +0.2 116,268 + +0.3 116,268 + -0.1 116,269 - -0.3 116,269 - -0.9 116,269 - -0.3 116,488 + AZOBR_RS00585 0.24 -1.8 116,488 + AZOBR_RS00585 0.24 -0.8 116,488 + AZOBR_RS00585 0.24 +0.6 116,489 - AZOBR_RS00585 0.24 -0.8 116,623 + AZOBR_RS00585 0.42 -0.4 116,624 - AZOBR_RS00585 0.42 +0.5 116,624 - AZOBR_RS00585 0.42 -1.6 116,752 + AZOBR_RS00585 0.60 -1.0 116,752 + AZOBR_RS00585 0.60 -0.7 116,753 - AZOBR_RS00585 0.60 -0.8 116,753 - AZOBR_RS00585 0.60 +0.1 116,771 - AZOBR_RS00585 0.62 -1.1 116,834 - AZOBR_RS00585 0.71 -1.9 117,133 + +0.5 117,133 + +0.5 117,133 + +0.5 117,134 - -0.1 117,134 - +0.4 117,157 - -0.4 117,650 - +0.1
Or see this region's nucleotide sequence