Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_29015 and AO353_29020 are separated by 81 nucleotides AO353_29020 and AO353_29025 are separated by 141 nucleotides
AO353_29015: AO353_29015 - ABC transporter substrate-binding protein, at 6,306,055 to 6,306,843
_29015
AO353_29020: AO353_29020 - amidohydrolase, at 6,306,925 to 6,308,094
_29020
AO353_29025: AO353_29025 - LysR family transcriptional regulator, at 6,308,236 to 6,309,189
_29025
Position (kb)
6306
6307
6308
6309 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6305.976 kb on + strand at 6305.976 kb on + strand at 6305.976 kb on + strand at 6305.976 kb on + strand at 6305.976 kb on + strand at 6306.016 kb on - strand at 6306.033 kb on + strand at 6306.033 kb on + strand at 6306.033 kb on + strand at 6306.033 kb on + strand at 6306.033 kb on + strand at 6306.033 kb on + strand at 6306.033 kb on + strand at 6306.033 kb on + strand at 6306.033 kb on + strand at 6306.034 kb on - strand at 6306.034 kb on - strand at 6306.034 kb on - strand at 6306.034 kb on - strand at 6306.042 kb on + strand at 6306.056 kb on + strand at 6306.057 kb on - strand at 6306.057 kb on - strand at 6306.057 kb on - strand at 6306.068 kb on + strand at 6306.068 kb on + strand at 6306.068 kb on + strand at 6306.068 kb on + strand at 6306.068 kb on + strand at 6306.069 kb on - strand at 6306.069 kb on - strand at 6306.069 kb on - strand at 6306.069 kb on - strand at 6306.069 kb on - strand at 6306.086 kb on + strand at 6306.086 kb on + strand at 6306.087 kb on - strand at 6306.107 kb on + strand at 6306.108 kb on - strand at 6306.242 kb on + strand, within AO353_29015 at 6306.261 kb on + strand, within AO353_29015 at 6306.336 kb on - strand, within AO353_29015 at 6306.356 kb on + strand, within AO353_29015 at 6306.357 kb on - strand, within AO353_29015 at 6306.357 kb on - strand, within AO353_29015 at 6306.370 kb on + strand, within AO353_29015 at 6306.514 kb on + strand, within AO353_29015 at 6306.515 kb on - strand, within AO353_29015 at 6306.719 kb on + strand, within AO353_29015 at 6306.720 kb on - strand, within AO353_29015 at 6306.734 kb on + strand, within AO353_29015 at 6306.734 kb on + strand, within AO353_29015 at 6306.735 kb on - strand, within AO353_29015 at 6306.735 kb on - strand, within AO353_29015 at 6306.837 kb on + strand at 6306.837 kb on + strand at 6306.847 kb on + strand at 6306.896 kb on - strand at 6306.909 kb on + strand at 6306.910 kb on - strand at 6306.910 kb on - strand at 6306.960 kb on - strand at 6307.055 kb on + strand, within AO353_29020 at 6307.055 kb on + strand, within AO353_29020 at 6307.056 kb on - strand, within AO353_29020 at 6307.056 kb on - strand, within AO353_29020 at 6307.056 kb on - strand, within AO353_29020 at 6307.214 kb on + strand, within AO353_29020 at 6307.218 kb on - strand, within AO353_29020 at 6307.218 kb on - strand, within AO353_29020 at 6307.318 kb on + strand, within AO353_29020 at 6307.319 kb on - strand, within AO353_29020 at 6307.486 kb on - strand, within AO353_29020 at 6307.486 kb on - strand, within AO353_29020 at 6307.565 kb on + strand, within AO353_29020 at 6307.743 kb on - strand, within AO353_29020 at 6307.743 kb on - strand, within AO353_29020 at 6307.770 kb on + strand, within AO353_29020 at 6307.771 kb on - strand, within AO353_29020 at 6307.820 kb on + strand, within AO353_29020 at 6307.820 kb on + strand, within AO353_29020 at 6307.821 kb on - strand, within AO353_29020 at 6307.821 kb on - strand, within AO353_29020 at 6308.025 kb on + strand at 6308.026 kb on - strand at 6308.116 kb on + strand at 6308.116 kb on + strand at 6308.116 kb on + strand at 6308.117 kb on - strand at 6308.117 kb on - strand at 6308.117 kb on - strand at 6308.117 kb on - strand at 6308.161 kb on + strand at 6308.161 kb on + strand at 6308.175 kb on + strand at 6308.252 kb on + strand at 6308.252 kb on + strand at 6308.252 kb on + strand at 6308.252 kb on + strand at 6308.253 kb on - strand at 6308.253 kb on - strand at 6308.253 kb on - strand at 6308.253 kb on - strand at 6308.253 kb on - strand at 6308.253 kb on - strand at 6308.679 kb on + strand, within AO353_29025 at 6308.818 kb on + strand, within AO353_29025 at 6308.819 kb on - strand, within AO353_29025 at 6308.952 kb on + strand, within AO353_29025 at 6308.952 kb on + strand, within AO353_29025 at 6308.952 kb on + strand, within AO353_29025 at 6308.952 kb on + strand, within AO353_29025 at 6308.953 kb on - strand, within AO353_29025 at 6308.953 kb on - strand, within AO353_29025 at 6308.953 kb on - strand, within AO353_29025 at 6309.037 kb on - strand, within AO353_29025 at 6309.037 kb on - strand, within AO353_29025
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 6,305,976 + -1.4 6,305,976 + -0.6 6,305,976 + +0.8 6,305,976 + +0.3 6,305,976 + -0.5 6,306,016 - +1.3 6,306,033 + -0.7 6,306,033 + +1.5 6,306,033 + +0.6 6,306,033 + -0.2 6,306,033 + -0.7 6,306,033 + +0.0 6,306,033 + +0.8 6,306,033 + +0.3 6,306,033 + -0.6 6,306,034 - -1.0 6,306,034 - +0.8 6,306,034 - -1.0 6,306,034 - -0.1 6,306,042 + -0.2 6,306,056 + -0.7 6,306,057 - -0.0 6,306,057 - +0.5 6,306,057 - -0.5 6,306,068 + -2.0 6,306,068 + -0.4 6,306,068 + +0.3 6,306,068 + +0.2 6,306,068 + -0.3 6,306,069 - +0.1 6,306,069 - -0.1 6,306,069 - +0.0 6,306,069 - -0.7 6,306,069 - +0.9 6,306,086 + +0.3 6,306,086 + -0.4 6,306,087 - +0.1 6,306,107 + -0.1 6,306,108 - -1.5 6,306,242 + AO353_29015 0.24 -0.5 6,306,261 + AO353_29015 0.26 +0.7 6,306,336 - AO353_29015 0.36 +0.2 6,306,356 + AO353_29015 0.38 +1.3 6,306,357 - AO353_29015 0.38 +0.1 6,306,357 - AO353_29015 0.38 -2.0 6,306,370 + AO353_29015 0.40 +1.3 6,306,514 + AO353_29015 0.58 -1.1 6,306,515 - AO353_29015 0.58 +0.7 6,306,719 + AO353_29015 0.84 -0.9 6,306,720 - AO353_29015 0.84 -0.7 6,306,734 + AO353_29015 0.86 -0.7 6,306,734 + AO353_29015 0.86 +0.5 6,306,735 - AO353_29015 0.86 -0.4 6,306,735 - AO353_29015 0.86 -0.5 6,306,837 + +0.2 6,306,837 + +0.2 6,306,847 + -0.1 6,306,896 - -0.4 6,306,909 + -0.1 6,306,910 - -2.4 6,306,910 - +0.3 6,306,960 - -1.0 6,307,055 + AO353_29020 0.11 +0.5 6,307,055 + AO353_29020 0.11 -1.1 6,307,056 - AO353_29020 0.11 -0.7 6,307,056 - AO353_29020 0.11 +0.8 6,307,056 - AO353_29020 0.11 -1.6 6,307,214 + AO353_29020 0.25 -0.2 6,307,218 - AO353_29020 0.25 -0.8 6,307,218 - AO353_29020 0.25 -0.7 6,307,318 + AO353_29020 0.34 -1.8 6,307,319 - AO353_29020 0.34 -1.2 6,307,486 - AO353_29020 0.48 -0.5 6,307,486 - AO353_29020 0.48 +0.5 6,307,565 + AO353_29020 0.55 +0.3 6,307,743 - AO353_29020 0.70 -0.0 6,307,743 - AO353_29020 0.70 -0.6 6,307,770 + AO353_29020 0.72 +0.3 6,307,771 - AO353_29020 0.72 -0.2 6,307,820 + AO353_29020 0.76 -0.5 6,307,820 + AO353_29020 0.76 +0.2 6,307,821 - AO353_29020 0.77 -1.7 6,307,821 - AO353_29020 0.77 -2.0 6,308,025 + -0.5 6,308,026 - +0.5 6,308,116 + +3.3 6,308,116 + -1.4 6,308,116 + +1.3 6,308,117 - -1.2 6,308,117 - -1.4 6,308,117 - +0.0 6,308,117 - +0.1 6,308,161 + -0.4 6,308,161 + -0.1 6,308,175 + -1.1 6,308,252 + -1.7 6,308,252 + +0.2 6,308,252 + +0.1 6,308,252 + +0.0 6,308,253 - +0.5 6,308,253 - +1.3 6,308,253 - -0.2 6,308,253 - -0.5 6,308,253 - +0.1 6,308,253 - -1.3 6,308,679 + AO353_29025 0.46 +0.8 6,308,818 + AO353_29025 0.61 +1.1 6,308,819 - AO353_29025 0.61 +1.6 6,308,952 + AO353_29025 0.75 +0.9 6,308,952 + AO353_29025 0.75 -0.2 6,308,952 + AO353_29025 0.75 +1.3 6,308,952 + AO353_29025 0.75 +0.0 6,308,953 - AO353_29025 0.75 +0.8 6,308,953 - AO353_29025 0.75 +0.5 6,308,953 - AO353_29025 0.75 +0.9 6,309,037 - AO353_29025 0.84 -0.6 6,309,037 - AO353_29025 0.84 -0.8
Or see this region's nucleotide sequence