Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27080 and AO353_27085 are separated by 172 nucleotides AO353_27085 and AO353_27090 are separated by 198 nucleotides AO353_27090 and AO353_27095 are separated by 245 nucleotides
AO353_27080: AO353_27080 - hypothetical protein, at 5,934,293 to 5,934,496
_27080
AO353_27085: AO353_27085 - hypothetical protein, at 5,934,669 to 5,934,899
_27085
AO353_27090: AO353_27090 - hypothetical protein, at 5,935,098 to 5,935,340
_27090
AO353_27095: AO353_27095 - carbonic anhydrase, at 5,935,586 to 5,936,338
_27095
Position (kb)
5935
5936 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5934.131 kb on - strand at 5934.131 kb on - strand at 5934.176 kb on + strand at 5934.200 kb on + strand at 5934.201 kb on - strand at 5934.251 kb on + strand at 5934.251 kb on + strand at 5934.252 kb on - strand at 5934.252 kb on - strand at 5934.281 kb on + strand at 5934.281 kb on + strand at 5934.332 kb on - strand, within AO353_27080 at 5934.344 kb on - strand, within AO353_27080 at 5934.347 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.383 kb on + strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.384 kb on - strand, within AO353_27080 at 5934.387 kb on + strand, within AO353_27080 at 5934.387 kb on + strand, within AO353_27080 at 5934.444 kb on + strand, within AO353_27080 at 5934.444 kb on + strand, within AO353_27080 at 5934.445 kb on - strand, within AO353_27080 at 5934.445 kb on - strand, within AO353_27080 at 5934.445 kb on - strand, within AO353_27080 at 5934.445 kb on - strand at 5934.456 kb on + strand, within AO353_27080 at 5934.456 kb on + strand, within AO353_27080 at 5934.457 kb on - strand, within AO353_27080 at 5934.457 kb on - strand, within AO353_27080 at 5934.457 kb on - strand, within AO353_27080 at 5934.460 kb on + strand, within AO353_27080 at 5934.461 kb on - strand, within AO353_27080 at 5934.461 kb on - strand, within AO353_27080 at 5934.461 kb on - strand, within AO353_27080 at 5934.461 kb on - strand, within AO353_27080 at 5934.461 kb on - strand, within AO353_27080 at 5934.500 kb on + strand at 5934.501 kb on - strand at 5934.501 kb on - strand at 5934.501 kb on - strand at 5934.501 kb on - strand at 5934.501 kb on - strand at 5934.501 kb on - strand at 5934.501 kb on - strand at 5934.541 kb on + strand at 5934.541 kb on + strand at 5934.541 kb on + strand at 5934.541 kb on + strand at 5934.542 kb on - strand at 5934.542 kb on - strand at 5934.542 kb on - strand at 5934.542 kb on - strand at 5934.542 kb on - strand at 5934.542 kb on - strand at 5934.543 kb on + strand at 5934.543 kb on + strand at 5934.543 kb on + strand at 5934.544 kb on - strand at 5934.544 kb on - strand at 5934.544 kb on - strand at 5934.544 kb on - strand at 5934.544 kb on - strand at 5934.544 kb on - strand at 5934.631 kb on - strand at 5934.631 kb on - strand at 5934.631 kb on - strand at 5934.653 kb on + strand at 5934.653 kb on + strand at 5934.654 kb on - strand at 5934.654 kb on - strand at 5934.670 kb on + strand at 5934.710 kb on - strand, within AO353_27085 at 5934.895 kb on - strand at 5934.895 kb on - strand at 5935.055 kb on + strand at 5935.055 kb on + strand at 5935.116 kb on - strand at 5935.116 kb on - strand at 5935.116 kb on - strand at 5935.295 kb on - strand, within AO353_27090 at 5935.295 kb on - strand, within AO353_27090 at 5935.362 kb on + strand at 5935.363 kb on - strand at 5935.363 kb on - strand at 5935.363 kb on - strand at 5935.363 kb on - strand at 5935.363 kb on - strand at 5935.363 kb on - strand at 5935.378 kb on + strand at 5935.378 kb on + strand at 5935.382 kb on + strand at 5935.389 kb on + strand at 5935.390 kb on - strand at 5935.424 kb on + strand at 5935.424 kb on + strand at 5935.442 kb on + strand at 5935.442 kb on + strand at 5935.442 kb on + strand at 5935.442 kb on + strand at 5935.456 kb on + strand at 5935.457 kb on - strand at 5935.457 kb on - strand at 5935.497 kb on + strand at 5935.498 kb on - strand at 5935.498 kb on - strand at 5935.498 kb on - strand at 5935.498 kb on - strand at 5935.498 kb on - strand at 5935.498 kb on - strand at 5935.498 kb on - strand at 5935.534 kb on + strand at 5935.534 kb on + strand at 5935.534 kb on + strand at 5935.534 kb on + strand at 5935.535 kb on - strand at 5935.535 kb on - strand at 5935.535 kb on - strand at 5935.569 kb on + strand at 5935.569 kb on + strand at 5935.577 kb on - strand at 5935.577 kb on - strand at 5935.577 kb on - strand at 5935.659 kb on + strand at 5935.786 kb on - strand, within AO353_27095 at 5935.786 kb on - strand at 5935.803 kb on - strand, within AO353_27095 at 5935.803 kb on - strand, within AO353_27095 at 5935.803 kb on - strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand, within AO353_27095 at 5935.804 kb on + strand at 5935.804 kb on + strand, within AO353_27095 at 5935.805 kb on - strand, within AO353_27095 at 5935.805 kb on - strand, within AO353_27095 at 5935.805 kb on - strand, within AO353_27095 at 5935.805 kb on - strand, within AO353_27095 at 5935.805 kb on - strand, within AO353_27095 at 5935.805 kb on - strand, within AO353_27095 at 5935.805 kb on - strand, within AO353_27095 at 5935.805 kb on - strand, within AO353_27095 at 5935.878 kb on + strand, within AO353_27095 at 5935.879 kb on - strand, within AO353_27095 at 5935.879 kb on - strand, within AO353_27095 at 5935.879 kb on - strand, within AO353_27095 at 5935.884 kb on + strand, within AO353_27095 at 5935.884 kb on + strand, within AO353_27095 at 5935.885 kb on - strand, within AO353_27095 at 5935.885 kb on - strand, within AO353_27095 at 5935.919 kb on + strand, within AO353_27095 at 5935.920 kb on - strand, within AO353_27095 at 5936.163 kb on + strand, within AO353_27095 at 5936.163 kb on + strand, within AO353_27095 at 5936.164 kb on - strand, within AO353_27095 at 5936.223 kb on + strand, within AO353_27095 at 5936.224 kb on - strand, within AO353_27095 at 5936.300 kb on + strand at 5936.300 kb on + strand at 5936.300 kb on + strand at 5936.301 kb on - strand at 5936.301 kb on - strand at 5936.301 kb on - strand at 5936.301 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 5,934,131 - +0.9 5,934,131 - -0.9 5,934,176 + +1.2 5,934,200 + +0.1 5,934,201 - -0.2 5,934,251 + +1.2 5,934,251 + -0.3 5,934,252 - +1.0 5,934,252 - -0.0 5,934,281 + -1.6 5,934,281 + -0.2 5,934,332 - AO353_27080 0.19 -0.1 5,934,344 - AO353_27080 0.25 -0.3 5,934,347 + AO353_27080 0.26 -1.3 5,934,383 + AO353_27080 0.44 +2.2 5,934,383 + AO353_27080 0.44 +1.0 5,934,383 + AO353_27080 0.44 -0.6 5,934,383 + AO353_27080 0.44 -1.5 5,934,383 + AO353_27080 0.44 -0.8 5,934,383 + AO353_27080 0.44 -1.7 5,934,383 + -2.1 5,934,383 + AO353_27080 0.44 -0.3 5,934,383 + AO353_27080 0.44 +0.1 5,934,383 + AO353_27080 0.44 -2.1 5,934,383 + AO353_27080 0.44 -0.3 5,934,383 + AO353_27080 0.44 -0.2 5,934,383 + AO353_27080 0.44 +2.2 5,934,384 - AO353_27080 0.45 -1.1 5,934,384 - AO353_27080 0.45 +1.0 5,934,384 - AO353_27080 0.45 +0.5 5,934,384 - AO353_27080 0.45 -0.3 5,934,384 - AO353_27080 0.45 -1.6 5,934,384 - AO353_27080 0.45 -0.3 5,934,384 - AO353_27080 0.45 +0.5 5,934,384 - AO353_27080 0.45 -0.1 5,934,384 - AO353_27080 0.45 +0.4 5,934,384 - AO353_27080 0.45 +0.2 5,934,384 - AO353_27080 0.45 +2.0 5,934,384 - AO353_27080 0.45 -0.1 5,934,384 - AO353_27080 0.45 -0.3 5,934,384 - AO353_27080 0.45 +0.4 5,934,384 - AO353_27080 0.45 +1.0 5,934,384 - AO353_27080 0.45 -0.5 5,934,384 - AO353_27080 0.45 -0.5 5,934,384 - AO353_27080 0.45 +0.1 5,934,384 - AO353_27080 0.45 +0.2 5,934,387 + AO353_27080 0.46 +0.0 5,934,387 + AO353_27080 0.46 +1.0 5,934,444 + AO353_27080 0.74 +0.1 5,934,444 + AO353_27080 0.74 +0.5 5,934,445 - AO353_27080 0.75 +1.8 5,934,445 - AO353_27080 0.75 +0.7 5,934,445 - AO353_27080 0.75 +1.2 5,934,445 - -0.3 5,934,456 + AO353_27080 0.80 -1.6 5,934,456 + AO353_27080 0.80 +0.0 5,934,457 - AO353_27080 0.80 -1.5 5,934,457 - AO353_27080 0.80 -0.9 5,934,457 - AO353_27080 0.80 -0.4 5,934,460 + AO353_27080 0.82 -1.9 5,934,461 - AO353_27080 0.82 -1.1 5,934,461 - AO353_27080 0.82 +0.1 5,934,461 - AO353_27080 0.82 -0.3 5,934,461 - AO353_27080 0.82 +0.5 5,934,461 - AO353_27080 0.82 +0.2 5,934,500 + +0.2 5,934,501 - -0.5 5,934,501 - -0.2 5,934,501 - -0.6 5,934,501 - +0.0 5,934,501 - +1.2 5,934,501 - -0.3 5,934,501 - -0.8 5,934,541 + +0.7 5,934,541 + +0.8 5,934,541 + -0.4 5,934,541 + +0.4 5,934,542 - +0.4 5,934,542 - -0.3 5,934,542 - -0.2 5,934,542 - +1.1 5,934,542 - +0.5 5,934,542 - +0.8 5,934,543 + +1.2 5,934,543 + -0.3 5,934,543 + -0.8 5,934,544 - +0.5 5,934,544 - +0.9 5,934,544 - +0.4 5,934,544 - +0.1 5,934,544 - +0.2 5,934,544 - -2.1 5,934,631 - -0.2 5,934,631 - -0.5 5,934,631 - -0.6 5,934,653 + -1.4 5,934,653 + -0.1 5,934,654 - -0.2 5,934,654 - -2.1 5,934,670 + -0.6 5,934,710 - AO353_27085 0.18 -0.8 5,934,895 - +0.8 5,934,895 - +0.6 5,935,055 + -1.4 5,935,055 + -0.1 5,935,116 - -1.9 5,935,116 - -2.3 5,935,116 - +0.8 5,935,295 - AO353_27090 0.81 -0.1 5,935,295 - AO353_27090 0.81 -1.6 5,935,362 + +0.5 5,935,363 - +1.2 5,935,363 - +0.2 5,935,363 - -0.6 5,935,363 - +0.0 5,935,363 - -0.8 5,935,363 - +0.5 5,935,378 + -1.4 5,935,378 + -0.1 5,935,382 + -0.3 5,935,389 + +0.4 5,935,390 - +0.0 5,935,424 + -1.3 5,935,424 + +0.8 5,935,442 + +0.1 5,935,442 + -1.1 5,935,442 + -0.3 5,935,442 + +0.6 5,935,456 + +0.4 5,935,457 - +0.9 5,935,457 - +0.7 5,935,497 + +0.1 5,935,498 - -0.1 5,935,498 - -1.9 5,935,498 - +0.0 5,935,498 - +0.1 5,935,498 - -0.6 5,935,498 - -0.1 5,935,498 - -0.2 5,935,534 + -0.5 5,935,534 + +0.2 5,935,534 + +0.2 5,935,534 + -1.2 5,935,535 - -1.8 5,935,535 - -1.2 5,935,535 - -0.3 5,935,569 + -0.0 5,935,569 + -1.1 5,935,577 - -0.5 5,935,577 - -1.8 5,935,577 - -0.6 5,935,659 + -0.3 5,935,786 - AO353_27095 0.27 +0.2 5,935,786 - -0.3 5,935,803 - AO353_27095 0.29 -2.2 5,935,803 - AO353_27095 0.29 -0.6 5,935,803 - AO353_27095 0.29 +0.1 5,935,804 + AO353_27095 0.29 -2.5 5,935,804 + AO353_27095 0.29 -1.5 5,935,804 + AO353_27095 0.29 +1.1 5,935,804 + AO353_27095 0.29 +0.8 5,935,804 + AO353_27095 0.29 -0.5 5,935,804 + AO353_27095 0.29 -1.6 5,935,804 + AO353_27095 0.29 -0.6 5,935,804 + AO353_27095 0.29 -1.6 5,935,804 + AO353_27095 0.29 -1.3 5,935,804 + AO353_27095 0.29 -0.2 5,935,804 + AO353_27095 0.29 -0.8 5,935,804 + AO353_27095 0.29 +0.1 5,935,804 + AO353_27095 0.29 -0.8 5,935,804 + +0.5 5,935,804 + AO353_27095 0.29 -0.2 5,935,805 - AO353_27095 0.29 +0.8 5,935,805 - AO353_27095 0.29 +0.2 5,935,805 - AO353_27095 0.29 -0.2 5,935,805 - AO353_27095 0.29 +0.4 5,935,805 - AO353_27095 0.29 -1.6 5,935,805 - AO353_27095 0.29 -1.2 5,935,805 - AO353_27095 0.29 -1.3 5,935,805 - AO353_27095 0.29 -0.8 5,935,878 + AO353_27095 0.39 +0.1 5,935,879 - AO353_27095 0.39 -0.3 5,935,879 - AO353_27095 0.39 -1.3 5,935,879 - AO353_27095 0.39 +0.2 5,935,884 + AO353_27095 0.40 -1.1 5,935,884 + AO353_27095 0.40 +0.2 5,935,885 - AO353_27095 0.40 -0.3 5,935,885 - AO353_27095 0.40 -0.8 5,935,919 + AO353_27095 0.44 -0.6 5,935,920 - AO353_27095 0.44 -3.0 5,936,163 + AO353_27095 0.77 -0.7 5,936,163 + AO353_27095 0.77 -0.5 5,936,164 - AO353_27095 0.77 -0.8 5,936,223 + AO353_27095 0.85 -2.5 5,936,224 - AO353_27095 0.85 -0.3 5,936,300 + +2.0 5,936,300 + -0.8 5,936,300 + +0.1 5,936,301 - +1.2 5,936,301 - +0.5 5,936,301 - +0.0 5,936,301 - +0.5
Or see this region's nucleotide sequence