Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26805 and AO353_26810 overlap by 4 nucleotides AO353_26810 and AO353_26815 are separated by 316 nucleotides AO353_26815 and AO353_26820 overlap by 23 nucleotides
AO353_26805: AO353_26805 - (2Fe-2S)-binding protein, at 5,871,732 to 5,873,141
_26805
AO353_26810: AO353_26810 - (2Fe-2S)-binding protein, at 5,873,138 to 5,873,452
_26810
AO353_26815: AO353_26815 - transcriptional regulator, at 5,873,769 to 5,874,452
_26815
AO353_26820: AO353_26820 - histidine kinase, at 5,874,430 to 5,875,824
_26820
Position (kb)
5873
5874 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5872.214 kb on + strand at 5872.214 kb on + strand, within AO353_26805 at 5872.214 kb on + strand, within AO353_26805 at 5872.215 kb on - strand, within AO353_26805 at 5872.215 kb on - strand, within AO353_26805 at 5872.259 kb on + strand, within AO353_26805 at 5872.260 kb on - strand, within AO353_26805 at 5872.280 kb on - strand, within AO353_26805 at 5872.280 kb on - strand, within AO353_26805 at 5872.341 kb on - strand, within AO353_26805 at 5872.417 kb on + strand, within AO353_26805 at 5872.417 kb on + strand, within AO353_26805 at 5872.418 kb on - strand, within AO353_26805 at 5872.418 kb on - strand, within AO353_26805 at 5872.744 kb on - strand, within AO353_26805 at 5872.744 kb on - strand, within AO353_26805 at 5872.744 kb on - strand, within AO353_26805 at 5872.776 kb on + strand, within AO353_26805 at 5872.782 kb on - strand, within AO353_26805 at 5872.982 kb on - strand, within AO353_26805 at 5872.982 kb on - strand, within AO353_26805 at 5872.982 kb on - strand, within AO353_26805 at 5872.982 kb on - strand, within AO353_26805 at 5873.017 kb on + strand at 5873.018 kb on - strand at 5873.141 kb on + strand at 5873.141 kb on + strand at 5873.141 kb on + strand at 5873.141 kb on + strand at 5873.142 kb on - strand at 5873.142 kb on - strand at 5873.142 kb on - strand at 5873.142 kb on - strand at 5873.142 kb on - strand at 5873.277 kb on + strand, within AO353_26810 at 5873.305 kb on + strand, within AO353_26810 at 5873.305 kb on + strand, within AO353_26810 at 5873.401 kb on + strand, within AO353_26810 at 5873.401 kb on + strand, within AO353_26810 at 5873.401 kb on + strand, within AO353_26810 at 5873.402 kb on - strand, within AO353_26810 at 5873.402 kb on - strand, within AO353_26810 at 5873.402 kb on - strand at 5873.402 kb on - strand, within AO353_26810 at 5873.434 kb on + strand at 5873.542 kb on + strand at 5873.542 kb on + strand at 5873.542 kb on + strand at 5873.542 kb on + strand at 5873.543 kb on - strand at 5873.543 kb on - strand at 5873.543 kb on - strand at 5873.556 kb on - strand at 5873.574 kb on + strand at 5873.580 kb on - strand at 5873.586 kb on + strand at 5873.681 kb on - strand at 5873.701 kb on + strand at 5873.702 kb on - strand at 5873.742 kb on + strand at 5873.743 kb on - strand at 5873.743 kb on - strand at 5873.743 kb on - strand at 5873.743 kb on - strand at 5873.751 kb on + strand at 5873.751 kb on + strand at 5873.751 kb on + strand at 5873.905 kb on - strand, within AO353_26815 at 5874.063 kb on + strand, within AO353_26815 at 5874.144 kb on + strand, within AO353_26815 at 5874.144 kb on + strand, within AO353_26815 at 5874.145 kb on - strand, within AO353_26815 at 5874.145 kb on - strand, within AO353_26815 at 5874.240 kb on + strand, within AO353_26815 at 5874.240 kb on + strand, within AO353_26815 at 5874.241 kb on - strand, within AO353_26815 at 5874.429 kb on + strand at 5874.450 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 5,872,214 + +1.6 5,872,214 + AO353_26805 0.34 +1.2 5,872,214 + AO353_26805 0.34 +0.2 5,872,215 - AO353_26805 0.34 +1.1 5,872,215 - AO353_26805 0.34 -0.4 5,872,259 + AO353_26805 0.37 +0.5 5,872,260 - AO353_26805 0.37 -1.2 5,872,280 - AO353_26805 0.39 +0.4 5,872,280 - AO353_26805 0.39 +1.2 5,872,341 - AO353_26805 0.43 -0.5 5,872,417 + AO353_26805 0.49 -2.4 5,872,417 + AO353_26805 0.49 -0.1 5,872,418 - AO353_26805 0.49 +2.0 5,872,418 - AO353_26805 0.49 +0.9 5,872,744 - AO353_26805 0.72 +0.2 5,872,744 - AO353_26805 0.72 +1.2 5,872,744 - AO353_26805 0.72 +1.2 5,872,776 + AO353_26805 0.74 -1.6 5,872,782 - AO353_26805 0.74 -0.1 5,872,982 - AO353_26805 0.89 -0.5 5,872,982 - AO353_26805 0.89 -1.4 5,872,982 - AO353_26805 0.89 +0.6 5,872,982 - AO353_26805 0.89 +0.6 5,873,017 + -1.8 5,873,018 - +0.0 5,873,141 + +0.5 5,873,141 + +0.1 5,873,141 + -0.5 5,873,141 + +0.2 5,873,142 - +0.5 5,873,142 - -1.1 5,873,142 - +0.6 5,873,142 - +0.5 5,873,142 - -1.2 5,873,277 + AO353_26810 0.44 -0.6 5,873,305 + AO353_26810 0.53 -1.2 5,873,305 + AO353_26810 0.53 -0.2 5,873,401 + AO353_26810 0.83 -1.4 5,873,401 + AO353_26810 0.83 -1.6 5,873,401 + AO353_26810 0.83 -0.4 5,873,402 - AO353_26810 0.84 -0.0 5,873,402 - AO353_26810 0.84 -1.5 5,873,402 - +0.2 5,873,402 - AO353_26810 0.84 -1.5 5,873,434 + +0.2 5,873,542 + +0.8 5,873,542 + -0.1 5,873,542 + -1.6 5,873,542 + +0.5 5,873,543 - +1.4 5,873,543 - -0.3 5,873,543 - -1.0 5,873,556 - -0.8 5,873,574 + -0.6 5,873,580 - -0.6 5,873,586 + +0.6 5,873,681 - +0.5 5,873,701 + -0.1 5,873,702 - +1.2 5,873,742 + -0.5 5,873,743 - +0.5 5,873,743 - -0.7 5,873,743 - -0.6 5,873,743 - -0.4 5,873,751 + -1.1 5,873,751 + -0.9 5,873,751 + +0.0 5,873,905 - AO353_26815 0.20 -0.0 5,874,063 + AO353_26815 0.43 +0.9 5,874,144 + AO353_26815 0.55 -1.9 5,874,144 + AO353_26815 0.55 -1.4 5,874,145 - AO353_26815 0.55 -0.8 5,874,145 - AO353_26815 0.55 +0.9 5,874,240 + AO353_26815 0.69 +0.1 5,874,240 + AO353_26815 0.69 +0.4 5,874,241 - AO353_26815 0.69 +0.1 5,874,429 + -0.1 5,874,450 + -0.6
Or see this region's nucleotide sequence