Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25155 and AO353_25160 are separated by 33 nucleotides AO353_25160 and AO353_25165 overlap by 23 nucleotides
AO353_25155: AO353_25155 - pyruvate dehydrogenase, at 5,549,269 to 5,550,288
_25155
AO353_25160: AO353_25160 - ABC transporter substrate-binding protein, at 5,550,322 to 5,551,299
_25160
AO353_25165: AO353_25165 - ATP-NAD kinase, at 5,551,277 to 5,552,377
_25165
Position (kb)
5550
5551
5552 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5549.336 kb on + strand at 5549.336 kb on + strand at 5549.336 kb on + strand at 5549.336 kb on + strand at 5549.337 kb on - strand at 5549.337 kb on - strand at 5549.337 kb on - strand at 5549.337 kb on - strand at 5549.374 kb on - strand, within AO353_25155 at 5549.374 kb on - strand, within AO353_25155 at 5549.445 kb on + strand, within AO353_25155 at 5549.445 kb on + strand, within AO353_25155 at 5549.445 kb on + strand, within AO353_25155 at 5549.488 kb on + strand, within AO353_25155 at 5549.489 kb on - strand, within AO353_25155 at 5549.523 kb on + strand, within AO353_25155 at 5549.523 kb on + strand, within AO353_25155 at 5549.524 kb on - strand, within AO353_25155 at 5549.524 kb on - strand, within AO353_25155 at 5549.524 kb on - strand, within AO353_25155 at 5549.524 kb on - strand, within AO353_25155 at 5549.633 kb on + strand, within AO353_25155 at 5549.633 kb on + strand, within AO353_25155 at 5549.633 kb on + strand, within AO353_25155 at 5549.633 kb on + strand, within AO353_25155 at 5549.694 kb on + strand, within AO353_25155 at 5549.694 kb on + strand, within AO353_25155 at 5549.694 kb on + strand, within AO353_25155 at 5549.694 kb on + strand, within AO353_25155 at 5549.695 kb on - strand, within AO353_25155 at 5549.695 kb on - strand, within AO353_25155 at 5549.695 kb on - strand, within AO353_25155 at 5549.695 kb on - strand, within AO353_25155 at 5549.695 kb on - strand, within AO353_25155 at 5549.696 kb on + strand, within AO353_25155 at 5549.696 kb on + strand, within AO353_25155 at 5549.696 kb on + strand, within AO353_25155 at 5549.696 kb on + strand, within AO353_25155 at 5549.696 kb on + strand, within AO353_25155 at 5549.697 kb on - strand, within AO353_25155 at 5549.697 kb on - strand, within AO353_25155 at 5549.697 kb on - strand, within AO353_25155 at 5549.697 kb on - strand, within AO353_25155 at 5549.697 kb on - strand, within AO353_25155 at 5549.710 kb on + strand, within AO353_25155 at 5549.711 kb on - strand, within AO353_25155 at 5549.729 kb on + strand, within AO353_25155 at 5549.729 kb on + strand, within AO353_25155 at 5549.784 kb on + strand, within AO353_25155 at 5549.951 kb on + strand, within AO353_25155 at 5550.026 kb on - strand, within AO353_25155 at 5550.026 kb on - strand, within AO353_25155 at 5550.071 kb on + strand, within AO353_25155 at 5550.122 kb on + strand, within AO353_25155 at 5550.123 kb on - strand, within AO353_25155 at 5550.269 kb on + strand at 5550.310 kb on + strand at 5550.311 kb on - strand at 5550.312 kb on + strand at 5550.312 kb on + strand at 5550.313 kb on - strand at 5550.313 kb on - strand at 5550.338 kb on + strand at 5550.339 kb on - strand at 5550.339 kb on - strand at 5550.573 kb on - strand, within AO353_25160 at 5550.576 kb on - strand, within AO353_25160 at 5551.037 kb on + strand, within AO353_25160 at 5551.037 kb on + strand, within AO353_25160 at 5551.038 kb on - strand, within AO353_25160 at 5551.060 kb on + strand, within AO353_25160 at 5551.060 kb on + strand, within AO353_25160 at 5551.060 kb on + strand, within AO353_25160 at 5551.061 kb on - strand, within AO353_25160 at 5551.172 kb on + strand, within AO353_25160 at 5551.172 kb on + strand, within AO353_25160 at 5551.173 kb on - strand, within AO353_25160 at 5551.173 kb on - strand, within AO353_25160 at 5551.303 kb on + strand at 5551.389 kb on + strand, within AO353_25165 at 5551.390 kb on - strand, within AO353_25165 at 5551.390 kb on - strand, within AO353_25165 at 5551.390 kb on - strand, within AO353_25165 at 5551.390 kb on - strand, within AO353_25165 at 5551.522 kb on + strand, within AO353_25165 at 5551.522 kb on + strand, within AO353_25165 at 5551.523 kb on - strand, within AO353_25165 at 5551.853 kb on - strand, within AO353_25165 at 5551.934 kb on + strand, within AO353_25165 at 5551.934 kb on + strand, within AO353_25165 at 5551.935 kb on - strand, within AO353_25165 at 5551.935 kb on - strand, within AO353_25165 at 5551.935 kb on - strand, within AO353_25165
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 5,549,336 + +0.5 5,549,336 + +0.3 5,549,336 + +0.4 5,549,336 + -1.9 5,549,337 - -0.5 5,549,337 - -0.2 5,549,337 - -0.1 5,549,337 - -0.1 5,549,374 - AO353_25155 0.10 -0.3 5,549,374 - AO353_25155 0.10 +1.3 5,549,445 + AO353_25155 0.17 -0.7 5,549,445 + AO353_25155 0.17 +0.3 5,549,445 + AO353_25155 0.17 -0.3 5,549,488 + AO353_25155 0.21 -0.6 5,549,489 - AO353_25155 0.22 -1.7 5,549,523 + AO353_25155 0.25 -0.9 5,549,523 + AO353_25155 0.25 +0.3 5,549,524 - AO353_25155 0.25 -0.0 5,549,524 - AO353_25155 0.25 +0.1 5,549,524 - AO353_25155 0.25 +0.5 5,549,524 - AO353_25155 0.25 +1.9 5,549,633 + AO353_25155 0.36 -0.3 5,549,633 + AO353_25155 0.36 +0.7 5,549,633 + AO353_25155 0.36 +1.7 5,549,633 + AO353_25155 0.36 +1.1 5,549,694 + AO353_25155 0.42 +1.1 5,549,694 + AO353_25155 0.42 +1.1 5,549,694 + AO353_25155 0.42 +0.1 5,549,694 + AO353_25155 0.42 +0.4 5,549,695 - AO353_25155 0.42 +0.4 5,549,695 - AO353_25155 0.42 +0.8 5,549,695 - AO353_25155 0.42 -1.3 5,549,695 - AO353_25155 0.42 +0.3 5,549,695 - AO353_25155 0.42 -0.5 5,549,696 + AO353_25155 0.42 -0.2 5,549,696 + AO353_25155 0.42 -0.2 5,549,696 + AO353_25155 0.42 -0.1 5,549,696 + AO353_25155 0.42 +0.7 5,549,696 + AO353_25155 0.42 -1.9 5,549,697 - AO353_25155 0.42 +0.8 5,549,697 - AO353_25155 0.42 +0.6 5,549,697 - AO353_25155 0.42 +1.1 5,549,697 - AO353_25155 0.42 -1.2 5,549,697 - AO353_25155 0.42 -0.5 5,549,710 + AO353_25155 0.43 -2.6 5,549,711 - AO353_25155 0.43 +0.8 5,549,729 + AO353_25155 0.45 -0.0 5,549,729 + AO353_25155 0.45 -0.3 5,549,784 + AO353_25155 0.50 +0.1 5,549,951 + AO353_25155 0.67 -0.5 5,550,026 - AO353_25155 0.74 -0.7 5,550,026 - AO353_25155 0.74 -1.1 5,550,071 + AO353_25155 0.79 +0.2 5,550,122 + AO353_25155 0.84 -0.7 5,550,123 - AO353_25155 0.84 +0.8 5,550,269 + -0.1 5,550,310 + -1.9 5,550,311 - -0.3 5,550,312 + +1.5 5,550,312 + -0.5 5,550,313 - -0.7 5,550,313 - +0.3 5,550,338 + -0.2 5,550,339 - -1.3 5,550,339 - +0.2 5,550,573 - AO353_25160 0.26 -0.9 5,550,576 - AO353_25160 0.26 +0.1 5,551,037 + AO353_25160 0.73 -2.0 5,551,037 + AO353_25160 0.73 -0.2 5,551,038 - AO353_25160 0.73 +0.1 5,551,060 + AO353_25160 0.75 -1.7 5,551,060 + AO353_25160 0.75 -1.7 5,551,060 + AO353_25160 0.75 +0.4 5,551,061 - AO353_25160 0.76 -0.5 5,551,172 + AO353_25160 0.87 +0.1 5,551,172 + AO353_25160 0.87 +0.1 5,551,173 - AO353_25160 0.87 -0.7 5,551,173 - AO353_25160 0.87 -0.5 5,551,303 + -1.2 5,551,389 + AO353_25165 0.10 +0.3 5,551,390 - AO353_25165 0.10 -0.3 5,551,390 - AO353_25165 0.10 +1.1 5,551,390 - AO353_25165 0.10 -0.5 5,551,390 - AO353_25165 0.10 +0.9 5,551,522 + AO353_25165 0.22 +0.4 5,551,522 + AO353_25165 0.22 -0.9 5,551,523 - AO353_25165 0.22 +0.7 5,551,853 - AO353_25165 0.52 -0.2 5,551,934 + AO353_25165 0.60 +0.1 5,551,934 + AO353_25165 0.60 +0.3 5,551,935 - AO353_25165 0.60 +1.1 5,551,935 - AO353_25165 0.60 -1.1 5,551,935 - AO353_25165 0.60 -0.1
Or see this region's nucleotide sequence