Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23475 and AO353_23480 overlap by 4 nucleotides AO353_23480 and AO353_23485 are separated by 256 nucleotides
AO353_23475: AO353_23475 - hypothetical protein, at 5,141,544 to 5,143,385
_23475
AO353_23480: AO353_23480 - ABC transporter substrate-binding protein, at 5,143,382 to 5,145,208
_23480
AO353_23485: AO353_23485 - lytic transglycosylase, at 5,145,465 to 5,146,898
_23485
Position (kb)
5143
5144
5145
5146 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5142.568 kb on + strand, within AO353_23475 at 5142.619 kb on + strand, within AO353_23475 at 5142.619 kb on + strand, within AO353_23475 at 5142.620 kb on - strand, within AO353_23475 at 5142.622 kb on + strand, within AO353_23475 at 5142.623 kb on - strand, within AO353_23475 at 5142.623 kb on - strand at 5142.649 kb on + strand, within AO353_23475 at 5142.650 kb on - strand, within AO353_23475 at 5142.650 kb on - strand, within AO353_23475 at 5142.650 kb on - strand, within AO353_23475 at 5142.650 kb on - strand, within AO353_23475 at 5142.686 kb on - strand, within AO353_23475 at 5142.703 kb on + strand, within AO353_23475 at 5142.743 kb on - strand, within AO353_23475 at 5142.816 kb on + strand, within AO353_23475 at 5142.922 kb on + strand, within AO353_23475 at 5142.922 kb on + strand, within AO353_23475 at 5142.922 kb on + strand, within AO353_23475 at 5142.923 kb on - strand, within AO353_23475 at 5142.923 kb on - strand, within AO353_23475 at 5142.925 kb on + strand, within AO353_23475 at 5143.010 kb on + strand, within AO353_23475 at 5143.010 kb on + strand, within AO353_23475 at 5143.010 kb on + strand, within AO353_23475 at 5143.011 kb on - strand, within AO353_23475 at 5143.011 kb on - strand, within AO353_23475 at 5143.011 kb on - strand, within AO353_23475 at 5143.011 kb on - strand, within AO353_23475 at 5143.011 kb on - strand, within AO353_23475 at 5143.034 kb on - strand, within AO353_23475 at 5143.090 kb on + strand, within AO353_23475 at 5143.135 kb on + strand, within AO353_23475 at 5143.135 kb on + strand, within AO353_23475 at 5143.135 kb on + strand, within AO353_23475 at 5143.136 kb on - strand, within AO353_23475 at 5143.145 kb on + strand, within AO353_23475 at 5143.297 kb on + strand at 5143.298 kb on - strand at 5143.371 kb on - strand at 5143.485 kb on + strand at 5143.485 kb on + strand at 5143.485 kb on + strand at 5143.485 kb on + strand at 5143.486 kb on - strand at 5143.486 kb on - strand at 5143.486 kb on - strand at 5143.492 kb on + strand at 5143.493 kb on - strand at 5143.493 kb on - strand at 5143.494 kb on + strand at 5143.494 kb on + strand at 5143.495 kb on - strand at 5143.495 kb on - strand at 5143.495 kb on - strand at 5143.495 kb on - strand at 5143.495 kb on - strand at 5143.495 kb on - strand at 5143.495 kb on - strand at 5143.512 kb on + strand at 5143.512 kb on + strand at 5143.632 kb on + strand, within AO353_23480 at 5143.674 kb on + strand, within AO353_23480 at 5143.674 kb on + strand, within AO353_23480 at 5143.675 kb on - strand, within AO353_23480 at 5143.675 kb on - strand, within AO353_23480 at 5143.761 kb on + strand, within AO353_23480 at 5143.761 kb on + strand, within AO353_23480 at 5143.761 kb on + strand, within AO353_23480 at 5143.761 kb on + strand, within AO353_23480 at 5144.110 kb on - strand, within AO353_23480 at 5144.112 kb on + strand, within AO353_23480 at 5144.112 kb on + strand, within AO353_23480 at 5144.112 kb on + strand, within AO353_23480 at 5144.112 kb on + strand, within AO353_23480 at 5144.113 kb on - strand, within AO353_23480 at 5144.215 kb on + strand, within AO353_23480 at 5144.215 kb on + strand, within AO353_23480 at 5144.216 kb on - strand, within AO353_23480 at 5144.216 kb on - strand, within AO353_23480 at 5144.216 kb on - strand, within AO353_23480 at 5144.352 kb on + strand, within AO353_23480 at 5144.352 kb on + strand, within AO353_23480 at 5144.352 kb on + strand, within AO353_23480 at 5144.352 kb on + strand, within AO353_23480 at 5144.352 kb on + strand, within AO353_23480 at 5144.353 kb on - strand, within AO353_23480 at 5144.353 kb on - strand, within AO353_23480 at 5144.353 kb on - strand, within AO353_23480 at 5144.353 kb on - strand, within AO353_23480 at 5144.353 kb on - strand, within AO353_23480 at 5144.353 kb on - strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.430 kb on + strand, within AO353_23480 at 5144.431 kb on - strand, within AO353_23480 at 5144.431 kb on - strand, within AO353_23480 at 5144.431 kb on - strand, within AO353_23480 at 5144.431 kb on - strand, within AO353_23480 at 5144.431 kb on - strand, within AO353_23480 at 5144.431 kb on - strand, within AO353_23480 at 5144.431 kb on - strand, within AO353_23480 at 5144.431 kb on - strand, within AO353_23480 at 5144.436 kb on + strand, within AO353_23480 at 5144.436 kb on + strand, within AO353_23480 at 5144.436 kb on + strand, within AO353_23480 at 5144.436 kb on + strand, within AO353_23480 at 5144.437 kb on - strand, within AO353_23480 at 5144.437 kb on - strand, within AO353_23480 at 5144.437 kb on - strand, within AO353_23480 at 5144.472 kb on + strand, within AO353_23480 at 5144.851 kb on - strand, within AO353_23480 at 5145.007 kb on - strand, within AO353_23480 at 5145.052 kb on + strand at 5145.052 kb on + strand at 5145.053 kb on - strand at 5145.132 kb on + strand at 5145.188 kb on + strand at 5145.189 kb on - strand at 5145.189 kb on - strand at 5145.206 kb on + strand at 5145.206 kb on + strand at 5145.206 kb on + strand at 5145.206 kb on + strand at 5145.206 kb on + strand at 5145.207 kb on - strand at 5145.252 kb on + strand at 5145.257 kb on + strand at 5145.267 kb on + strand at 5145.359 kb on + strand at 5145.359 kb on + strand at 5145.360 kb on - strand at 5145.360 kb on - strand at 5145.360 kb on - strand at 5145.360 kb on - strand at 5145.577 kb on + strand at 5145.577 kb on + strand at 5145.578 kb on - strand at 5145.578 kb on - strand at 5145.578 kb on - strand at 5145.604 kb on + strand at 5145.604 kb on + strand at 5145.604 kb on + strand at 5145.604 kb on + strand at 5145.604 kb on + strand at 5145.604 kb on + strand at 5145.605 kb on - strand at 5146.085 kb on - strand, within AO353_23485 at 5146.120 kb on + strand at 5146.171 kb on + strand, within AO353_23485 at 5146.171 kb on + strand at 5146.171 kb on + strand, within AO353_23485 at 5146.171 kb on + strand, within AO353_23485 at 5146.171 kb on + strand, within AO353_23485 at 5146.172 kb on - strand, within AO353_23485 at 5146.172 kb on - strand, within AO353_23485 at 5146.172 kb on - strand, within AO353_23485 at 5146.172 kb on - strand, within AO353_23485 at 5146.172 kb on - strand, within AO353_23485 at 5146.172 kb on - strand, within AO353_23485 at 5146.172 kb on - strand, within AO353_23485 at 5146.207 kb on + strand, within AO353_23485
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 5,142,568 + AO353_23475 0.56 -0.4 5,142,619 + AO353_23475 0.58 +1.2 5,142,619 + AO353_23475 0.58 -1.1 5,142,620 - AO353_23475 0.58 -1.2 5,142,622 + AO353_23475 0.59 -1.8 5,142,623 - AO353_23475 0.59 +0.3 5,142,623 - +0.6 5,142,649 + AO353_23475 0.60 -1.4 5,142,650 - AO353_23475 0.60 -0.7 5,142,650 - AO353_23475 0.60 +0.8 5,142,650 - AO353_23475 0.60 +0.6 5,142,650 - AO353_23475 0.60 +1.0 5,142,686 - AO353_23475 0.62 -0.6 5,142,703 + AO353_23475 0.63 -1.1 5,142,743 - AO353_23475 0.65 +0.5 5,142,816 + AO353_23475 0.69 +1.4 5,142,922 + AO353_23475 0.75 -1.0 5,142,922 + AO353_23475 0.75 +1.4 5,142,922 + AO353_23475 0.75 -0.2 5,142,923 - AO353_23475 0.75 -0.3 5,142,923 - AO353_23475 0.75 -0.4 5,142,925 + AO353_23475 0.75 +2.2 5,143,010 + AO353_23475 0.80 -1.2 5,143,010 + AO353_23475 0.80 +0.8 5,143,010 + AO353_23475 0.80 +0.1 5,143,011 - AO353_23475 0.80 -0.8 5,143,011 - AO353_23475 0.80 +1.0 5,143,011 - AO353_23475 0.80 +0.5 5,143,011 - AO353_23475 0.80 +0.1 5,143,011 - AO353_23475 0.80 +0.3 5,143,034 - AO353_23475 0.81 +0.0 5,143,090 + AO353_23475 0.84 +0.8 5,143,135 + AO353_23475 0.86 -0.5 5,143,135 + AO353_23475 0.86 -0.1 5,143,135 + AO353_23475 0.86 +1.2 5,143,136 - AO353_23475 0.86 +0.4 5,143,145 + AO353_23475 0.87 +1.2 5,143,297 + -0.1 5,143,298 - -0.8 5,143,371 - +0.4 5,143,485 + -0.4 5,143,485 + +0.5 5,143,485 + -0.1 5,143,485 + -1.8 5,143,486 - -0.4 5,143,486 - +0.4 5,143,486 - +0.1 5,143,492 + -1.1 5,143,493 - +0.1 5,143,493 - -0.1 5,143,494 + -1.4 5,143,494 + -0.6 5,143,495 - +0.8 5,143,495 - -0.2 5,143,495 - +0.2 5,143,495 - +0.2 5,143,495 - -0.6 5,143,495 - +0.4 5,143,495 - -0.1 5,143,512 + +0.6 5,143,512 + +1.8 5,143,632 + AO353_23480 0.14 -0.6 5,143,674 + AO353_23480 0.16 -1.2 5,143,674 + AO353_23480 0.16 -0.3 5,143,675 - AO353_23480 0.16 +2.0 5,143,675 - AO353_23480 0.16 +0.2 5,143,761 + AO353_23480 0.21 -0.9 5,143,761 + AO353_23480 0.21 -1.5 5,143,761 + AO353_23480 0.21 +0.0 5,143,761 + AO353_23480 0.21 +0.5 5,144,110 - AO353_23480 0.40 +0.3 5,144,112 + AO353_23480 0.40 -0.7 5,144,112 + AO353_23480 0.40 +0.8 5,144,112 + AO353_23480 0.40 -0.6 5,144,112 + AO353_23480 0.40 -1.1 5,144,113 - AO353_23480 0.40 -0.8 5,144,215 + AO353_23480 0.46 -1.3 5,144,215 + AO353_23480 0.46 -0.8 5,144,216 - AO353_23480 0.46 -1.3 5,144,216 - AO353_23480 0.46 +1.2 5,144,216 - AO353_23480 0.46 -0.4 5,144,352 + AO353_23480 0.53 +1.2 5,144,352 + AO353_23480 0.53 +2.5 5,144,352 + AO353_23480 0.53 +1.3 5,144,352 + AO353_23480 0.53 -0.1 5,144,352 + AO353_23480 0.53 +0.6 5,144,353 - AO353_23480 0.53 +1.2 5,144,353 - AO353_23480 0.53 +0.9 5,144,353 - AO353_23480 0.53 +0.0 5,144,353 - AO353_23480 0.53 +0.7 5,144,353 - AO353_23480 0.53 +1.2 5,144,353 - AO353_23480 0.53 +1.9 5,144,430 + AO353_23480 0.57 -1.4 5,144,430 + AO353_23480 0.57 +0.9 5,144,430 + AO353_23480 0.57 +0.7 5,144,430 + AO353_23480 0.57 +1.2 5,144,430 + AO353_23480 0.57 +0.3 5,144,430 + AO353_23480 0.57 +0.3 5,144,430 + AO353_23480 0.57 +0.3 5,144,430 + AO353_23480 0.57 -1.5 5,144,430 + AO353_23480 0.57 +0.5 5,144,430 + AO353_23480 0.57 +1.2 5,144,430 + AO353_23480 0.57 +0.5 5,144,430 + AO353_23480 0.57 -0.6 5,144,431 - AO353_23480 0.57 +0.5 5,144,431 - AO353_23480 0.57 +0.1 5,144,431 - AO353_23480 0.57 +2.2 5,144,431 - AO353_23480 0.57 +0.3 5,144,431 - AO353_23480 0.57 +0.8 5,144,431 - AO353_23480 0.57 -0.1 5,144,431 - AO353_23480 0.57 -1.8 5,144,431 - AO353_23480 0.57 -0.1 5,144,436 + AO353_23480 0.58 +0.8 5,144,436 + AO353_23480 0.58 +1.2 5,144,436 + AO353_23480 0.58 +0.6 5,144,436 + AO353_23480 0.58 +1.2 5,144,437 - AO353_23480 0.58 -0.0 5,144,437 - AO353_23480 0.58 +0.6 5,144,437 - AO353_23480 0.58 -0.7 5,144,472 + AO353_23480 0.60 -0.4 5,144,851 - AO353_23480 0.80 -0.5 5,145,007 - AO353_23480 0.89 -0.4 5,145,052 + -0.0 5,145,052 + +0.3 5,145,053 - -0.7 5,145,132 + -0.2 5,145,188 + +0.2 5,145,189 - +1.0 5,145,189 - +0.3 5,145,206 + -0.6 5,145,206 + -0.6 5,145,206 + -2.3 5,145,206 + +0.4 5,145,206 + -0.9 5,145,207 - -0.6 5,145,252 + +0.7 5,145,257 + +0.8 5,145,267 + -0.5 5,145,359 + +2.8 5,145,359 + -0.4 5,145,360 - -1.5 5,145,360 - +0.7 5,145,360 - +1.8 5,145,360 - +0.7 5,145,577 + +1.2 5,145,577 + +0.9 5,145,578 - +0.2 5,145,578 - -2.1 5,145,578 - -0.6 5,145,604 + +0.8 5,145,604 + +0.2 5,145,604 + -0.7 5,145,604 + +0.8 5,145,604 + -0.4 5,145,604 + -1.7 5,145,605 - -2.1 5,146,085 - AO353_23485 0.43 -0.8 5,146,120 + -1.1 5,146,171 + AO353_23485 0.49 +0.5 5,146,171 + +1.8 5,146,171 + AO353_23485 0.49 +3.0 5,146,171 + AO353_23485 0.49 +0.5 5,146,171 + AO353_23485 0.49 +0.5 5,146,172 - AO353_23485 0.49 +1.5 5,146,172 - AO353_23485 0.49 +0.8 5,146,172 - AO353_23485 0.49 +0.8 5,146,172 - AO353_23485 0.49 -0.8 5,146,172 - AO353_23485 0.49 +0.5 5,146,172 - AO353_23485 0.49 +0.6 5,146,172 - AO353_23485 0.49 -0.8 5,146,207 + AO353_23485 0.52 +0.2
Or see this region's nucleotide sequence