Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23305 and AO353_23310 are separated by 133 nucleotides AO353_23310 and AO353_23315 are separated by 134 nucleotides AO353_23315 and AO353_23320 are separated by 150 nucleotides AO353_23320 and AO353_23325 are separated by 231 nucleotides
AO353_23305: AO353_23305 - aspartate carbamoyltransferase, at 5,112,426 to 5,112,953
_23305
AO353_23310: AO353_23310 - permease, at 5,113,087 to 5,113,236
_23310
AO353_23315: AO353_23315 - hypothetical protein, at 5,113,371 to 5,113,661
_23315
AO353_23320: AO353_23320 - hypothetical protein, at 5,113,812 to 5,114,084
_23320
AO353_23325: AO353_23325 - hypothetical protein, at 5,114,316 to 5,114,912
_23325
Position (kb)
5113
5114 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5112.388 kb on - strand at 5112.388 kb on - strand at 5112.388 kb on - strand at 5112.409 kb on + strand at 5112.409 kb on + strand at 5112.409 kb on + strand at 5112.409 kb on + strand at 5112.409 kb on + strand at 5112.409 kb on + strand at 5112.410 kb on - strand at 5112.632 kb on + strand, within AO353_23305 at 5112.632 kb on + strand, within AO353_23305 at 5112.633 kb on - strand, within AO353_23305 at 5112.798 kb on + strand, within AO353_23305 at 5112.799 kb on - strand, within AO353_23305 at 5112.799 kb on - strand, within AO353_23305 at 5112.831 kb on + strand, within AO353_23305 at 5112.831 kb on + strand, within AO353_23305 at 5112.831 kb on + strand, within AO353_23305 at 5112.831 kb on + strand, within AO353_23305 at 5112.831 kb on + strand, within AO353_23305 at 5112.831 kb on + strand, within AO353_23305 at 5112.832 kb on - strand, within AO353_23305 at 5112.832 kb on - strand, within AO353_23305 at 5112.832 kb on - strand, within AO353_23305 at 5112.832 kb on - strand, within AO353_23305 at 5112.832 kb on - strand, within AO353_23305 at 5112.832 kb on - strand, within AO353_23305 at 5112.832 kb on - strand, within AO353_23305 at 5112.832 kb on - strand, within AO353_23305 at 5112.832 kb on - strand, within AO353_23305 at 5112.832 kb on - strand, within AO353_23305 at 5112.834 kb on - strand, within AO353_23305 at 5112.834 kb on - strand, within AO353_23305 at 5112.834 kb on - strand, within AO353_23305 at 5112.834 kb on - strand, within AO353_23305 at 5112.834 kb on - strand, within AO353_23305 at 5112.834 kb on - strand, within AO353_23305 at 5112.911 kb on + strand at 5112.911 kb on + strand at 5113.023 kb on + strand at 5113.042 kb on - strand at 5113.189 kb on + strand, within AO353_23310 at 5113.190 kb on - strand, within AO353_23310 at 5113.281 kb on - strand at 5113.283 kb on + strand at 5113.313 kb on + strand at 5113.370 kb on + strand at 5113.370 kb on + strand at 5113.370 kb on + strand at 5113.370 kb on + strand at 5113.370 kb on + strand at 5113.370 kb on + strand at 5113.370 kb on + strand at 5113.370 kb on + strand at 5113.371 kb on - strand at 5113.371 kb on - strand at 5113.371 kb on - strand at 5113.371 kb on - strand at 5113.371 kb on - strand at 5113.371 kb on - strand at 5113.371 kb on - strand at 5113.371 kb on - strand at 5113.371 kb on - strand at 5113.371 kb on - strand at 5113.371 kb on - strand at 5113.374 kb on + strand at 5113.374 kb on + strand at 5113.374 kb on + strand at 5113.374 kb on + strand at 5113.374 kb on + strand at 5113.374 kb on + strand at 5113.374 kb on + strand at 5113.374 kb on + strand at 5113.374 kb on + strand at 5113.375 kb on - strand at 5113.375 kb on - strand at 5113.375 kb on - strand at 5113.375 kb on - strand at 5113.375 kb on - strand at 5113.375 kb on - strand at 5113.375 kb on - strand at 5113.375 kb on - strand at 5113.375 kb on - strand at 5113.384 kb on + strand at 5113.384 kb on + strand at 5113.384 kb on + strand at 5113.385 kb on - strand at 5113.385 kb on - strand at 5113.392 kb on + strand at 5113.392 kb on + strand at 5113.393 kb on - strand at 5113.429 kb on + strand, within AO353_23315 at 5113.429 kb on + strand, within AO353_23315 at 5113.429 kb on + strand, within AO353_23315 at 5113.430 kb on - strand, within AO353_23315 at 5113.488 kb on + strand, within AO353_23315 at 5113.489 kb on - strand, within AO353_23315 at 5113.604 kb on + strand, within AO353_23315 at 5113.659 kb on + strand at 5113.686 kb on + strand at 5113.686 kb on + strand at 5113.686 kb on + strand at 5113.687 kb on - strand at 5113.687 kb on - strand at 5113.687 kb on - strand at 5113.696 kb on + strand at 5113.696 kb on + strand at 5113.697 kb on - strand at 5113.700 kb on + strand at 5113.700 kb on + strand at 5113.700 kb on + strand at 5113.700 kb on + strand at 5113.701 kb on - strand at 5113.701 kb on - strand at 5113.701 kb on - strand at 5113.701 kb on - strand at 5113.701 kb on - strand at 5113.701 kb on - strand at 5113.701 kb on - strand at 5113.764 kb on + strand at 5113.787 kb on - strand at 5113.787 kb on - strand at 5113.787 kb on - strand at 5113.949 kb on + strand, within AO353_23320 at 5113.985 kb on - strand, within AO353_23320 at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.074 kb on + strand at 5114.078 kb on + strand at 5114.078 kb on + strand at 5114.078 kb on + strand at 5114.078 kb on + strand at 5114.107 kb on + strand at 5114.108 kb on - strand at 5114.108 kb on - strand at 5114.168 kb on + strand at 5114.168 kb on + strand at 5114.168 kb on + strand at 5114.169 kb on - strand at 5114.169 kb on - strand at 5114.169 kb on - strand at 5114.169 kb on - strand at 5114.169 kb on - strand at 5114.169 kb on - strand at 5114.169 kb on - strand at 5114.170 kb on + strand at 5114.170 kb on + strand at 5114.170 kb on + strand at 5114.170 kb on + strand at 5114.170 kb on + strand at 5114.171 kb on - strand at 5114.171 kb on - strand at 5114.171 kb on - strand at 5114.171 kb on - strand at 5114.171 kb on - strand at 5114.171 kb on - strand at 5114.171 kb on - strand at 5114.171 kb on - strand at 5114.171 kb on - strand at 5114.218 kb on + strand at 5114.219 kb on - strand at 5114.227 kb on + strand at 5114.227 kb on + strand at 5114.227 kb on + strand at 5114.228 kb on - strand at 5114.228 kb on - strand at 5114.262 kb on + strand at 5114.262 kb on + strand at 5114.262 kb on + strand at 5114.262 kb on + strand at 5114.262 kb on + strand at 5114.263 kb on - strand at 5114.279 kb on + strand at 5114.279 kb on + strand at 5114.279 kb on + strand at 5114.280 kb on - strand at 5114.302 kb on + strand at 5114.302 kb on + strand at 5114.302 kb on + strand at 5114.302 kb on + strand at 5114.302 kb on + strand at 5114.302 kb on + strand at 5114.303 kb on - strand at 5114.303 kb on - strand at 5114.303 kb on - strand at 5114.303 kb on - strand at 5114.304 kb on + strand at 5114.304 kb on + strand at 5114.304 kb on + strand at 5114.304 kb on + strand at 5114.305 kb on - strand at 5114.305 kb on - strand at 5114.305 kb on - strand at 5114.305 kb on - strand at 5114.305 kb on - strand at 5114.305 kb on - strand at 5114.305 kb on - strand at 5114.305 kb on - strand at 5114.305 kb on - strand at 5114.443 kb on + strand, within AO353_23325 at 5114.443 kb on + strand, within AO353_23325 at 5114.444 kb on - strand, within AO353_23325 at 5114.444 kb on - strand, within AO353_23325 at 5114.444 kb on - strand at 5114.444 kb on - strand, within AO353_23325 at 5114.450 kb on + strand, within AO353_23325 at 5114.476 kb on + strand, within AO353_23325 at 5114.526 kb on + strand, within AO353_23325 at 5114.526 kb on + strand, within AO353_23325 at 5114.526 kb on + strand, within AO353_23325 at 5114.527 kb on - strand, within AO353_23325 at 5114.527 kb on - strand, within AO353_23325 at 5114.600 kb on + strand, within AO353_23325 at 5114.600 kb on + strand, within AO353_23325 at 5114.601 kb on - strand, within AO353_23325
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 5,112,388 - +1.0 5,112,388 - -0.5 5,112,388 - -0.4 5,112,409 + -0.4 5,112,409 + +1.2 5,112,409 + -0.8 5,112,409 + +0.7 5,112,409 + +0.7 5,112,409 + -0.2 5,112,410 - -1.3 5,112,632 + AO353_23305 0.39 +1.2 5,112,632 + AO353_23305 0.39 +0.6 5,112,633 - AO353_23305 0.39 -0.2 5,112,798 + AO353_23305 0.70 -0.6 5,112,799 - AO353_23305 0.71 +0.9 5,112,799 - AO353_23305 0.71 +0.2 5,112,831 + AO353_23305 0.77 -1.0 5,112,831 + AO353_23305 0.77 -0.3 5,112,831 + AO353_23305 0.77 +0.1 5,112,831 + AO353_23305 0.77 -1.4 5,112,831 + AO353_23305 0.77 -2.0 5,112,831 + AO353_23305 0.77 -1.6 5,112,832 - AO353_23305 0.77 +0.1 5,112,832 - AO353_23305 0.77 -1.0 5,112,832 - AO353_23305 0.77 -2.5 5,112,832 - AO353_23305 0.77 +0.6 5,112,832 - AO353_23305 0.77 +0.2 5,112,832 - AO353_23305 0.77 +1.2 5,112,832 - AO353_23305 0.77 -0.6 5,112,832 - AO353_23305 0.77 -0.4 5,112,832 - AO353_23305 0.77 -1.1 5,112,832 - AO353_23305 0.77 +0.3 5,112,834 - AO353_23305 0.77 -0.2 5,112,834 - AO353_23305 0.77 +0.9 5,112,834 - AO353_23305 0.77 +0.2 5,112,834 - AO353_23305 0.77 -0.2 5,112,834 - AO353_23305 0.77 +1.3 5,112,834 - AO353_23305 0.77 +0.9 5,112,911 + -0.1 5,112,911 + +0.5 5,113,023 + +0.7 5,113,042 - -0.8 5,113,189 + AO353_23310 0.68 -0.4 5,113,190 - AO353_23310 0.69 +1.2 5,113,281 - +0.6 5,113,283 + -0.6 5,113,313 + -1.0 5,113,370 + +0.4 5,113,370 + +0.2 5,113,370 + +1.2 5,113,370 + -0.4 5,113,370 + +1.0 5,113,370 + +1.7 5,113,370 + -0.8 5,113,370 + -0.8 5,113,371 - -0.8 5,113,371 - +0.9 5,113,371 - +0.4 5,113,371 - +0.8 5,113,371 - -0.1 5,113,371 - -0.4 5,113,371 - +0.4 5,113,371 - -0.4 5,113,371 - -0.5 5,113,371 - +1.0 5,113,371 - -1.1 5,113,374 + +0.2 5,113,374 + +1.0 5,113,374 + -0.8 5,113,374 + -0.0 5,113,374 + +0.8 5,113,374 + -2.0 5,113,374 + -0.5 5,113,374 + -0.2 5,113,374 + +0.7 5,113,375 - +1.2 5,113,375 - -0.2 5,113,375 - -1.0 5,113,375 - +0.6 5,113,375 - -1.1 5,113,375 - -0.1 5,113,375 - +0.0 5,113,375 - -2.7 5,113,375 - +0.2 5,113,384 + +0.4 5,113,384 + +0.4 5,113,384 + +0.6 5,113,385 - +1.2 5,113,385 - -0.1 5,113,392 + -0.7 5,113,392 + +0.1 5,113,393 - -0.7 5,113,429 + AO353_23315 0.20 -0.7 5,113,429 + AO353_23315 0.20 -1.3 5,113,429 + AO353_23315 0.20 -1.6 5,113,430 - AO353_23315 0.20 -0.4 5,113,488 + AO353_23315 0.40 +1.2 5,113,489 - AO353_23315 0.41 -0.6 5,113,604 + AO353_23315 0.80 +0.2 5,113,659 + -0.3 5,113,686 + +1.4 5,113,686 + -1.3 5,113,686 + +0.2 5,113,687 - -1.1 5,113,687 - +0.9 5,113,687 - +0.4 5,113,696 + -0.1 5,113,696 + -0.4 5,113,697 - -0.6 5,113,700 + -0.8 5,113,700 + -0.1 5,113,700 + -0.5 5,113,700 + +1.7 5,113,701 - +1.6 5,113,701 - -1.1 5,113,701 - +0.8 5,113,701 - -0.8 5,113,701 - +0.2 5,113,701 - -1.5 5,113,701 - +0.2 5,113,764 + -0.6 5,113,787 - -0.4 5,113,787 - +0.4 5,113,787 - -1.0 5,113,949 + AO353_23320 0.50 +0.4 5,113,985 - AO353_23320 0.63 -0.2 5,114,074 + +0.3 5,114,074 + -1.0 5,114,074 + -0.4 5,114,074 + +0.2 5,114,074 + -1.8 5,114,074 + +0.4 5,114,074 + +0.9 5,114,074 + +1.8 5,114,074 + +0.4 5,114,074 + +0.8 5,114,074 + +0.5 5,114,074 + -0.2 5,114,074 + +0.2 5,114,074 + -0.4 5,114,074 + -0.3 5,114,074 + -0.5 5,114,074 + +0.9 5,114,074 + -0.8 5,114,078 + -0.1 5,114,078 + -0.7 5,114,078 + -0.1 5,114,078 + +0.8 5,114,107 + +1.5 5,114,108 - -0.3 5,114,108 - -0.7 5,114,168 + +1.1 5,114,168 + +1.0 5,114,168 + +0.3 5,114,169 - +0.1 5,114,169 - +0.5 5,114,169 - +1.4 5,114,169 - -0.6 5,114,169 - +0.6 5,114,169 - -0.4 5,114,169 - +0.4 5,114,170 + -0.2 5,114,170 + -0.6 5,114,170 + -0.6 5,114,170 + +1.0 5,114,170 + +1.0 5,114,171 - -0.2 5,114,171 - -0.3 5,114,171 - +0.2 5,114,171 - +1.7 5,114,171 - +0.6 5,114,171 - -0.7 5,114,171 - +0.3 5,114,171 - +0.9 5,114,171 - -1.1 5,114,218 + -0.7 5,114,219 - -0.4 5,114,227 + -0.8 5,114,227 + +1.3 5,114,227 + -0.1 5,114,228 - +0.6 5,114,228 - +0.7 5,114,262 + +0.0 5,114,262 + -0.3 5,114,262 + -1.3 5,114,262 + +1.0 5,114,262 + -0.5 5,114,263 - -0.4 5,114,279 + +0.6 5,114,279 + -1.0 5,114,279 + +0.5 5,114,280 - -0.0 5,114,302 + -2.0 5,114,302 + +0.2 5,114,302 + -0.6 5,114,302 + +1.7 5,114,302 + +0.6 5,114,302 + -0.5 5,114,303 - -0.0 5,114,303 - -0.4 5,114,303 - -0.7 5,114,303 - -0.6 5,114,304 + -0.4 5,114,304 + -0.4 5,114,304 + +0.1 5,114,304 + -0.5 5,114,305 - -0.3 5,114,305 - -0.4 5,114,305 - +0.2 5,114,305 - +2.8 5,114,305 - +0.4 5,114,305 - +2.8 5,114,305 - +0.7 5,114,305 - -0.4 5,114,305 - +1.2 5,114,443 + AO353_23325 0.21 +0.2 5,114,443 + AO353_23325 0.21 -1.4 5,114,444 - AO353_23325 0.21 -0.8 5,114,444 - AO353_23325 0.21 +0.7 5,114,444 - -1.1 5,114,444 - AO353_23325 0.21 +0.4 5,114,450 + AO353_23325 0.22 -2.2 5,114,476 + AO353_23325 0.27 -0.2 5,114,526 + AO353_23325 0.35 -0.8 5,114,526 + AO353_23325 0.35 -0.8 5,114,526 + AO353_23325 0.35 -0.5 5,114,527 - AO353_23325 0.35 -0.6 5,114,527 - AO353_23325 0.35 -1.6 5,114,600 + AO353_23325 0.48 -1.0 5,114,600 + AO353_23325 0.48 +0.6 5,114,601 - AO353_23325 0.48 -0.3
Or see this region's nucleotide sequence