Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23080 and AO353_23085 are separated by 112 nucleotides AO353_23085 and AO353_23090 are separated by 236 nucleotides
AO353_23080: AO353_23080 - GntR family transcriptional regulator, at 5,065,814 to 5,067,148
_23080
AO353_23085: AO353_23085 - AraC family transcriptional regulator, at 5,067,261 to 5,067,875
_23085
AO353_23090: AO353_23090 - LysR family transcriptional regulator, at 5,068,112 to 5,069,005
_23090
Position (kb)
5067
5068 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5066.295 kb on + strand, within AO353_23080 at 5066.296 kb on - strand, within AO353_23080 at 5066.359 kb on - strand, within AO353_23080 at 5066.472 kb on + strand, within AO353_23080 at 5066.472 kb on + strand, within AO353_23080 at 5066.690 kb on + strand, within AO353_23080 at 5066.690 kb on + strand, within AO353_23080 at 5066.690 kb on + strand, within AO353_23080 at 5066.690 kb on + strand, within AO353_23080 at 5066.691 kb on - strand, within AO353_23080 at 5066.691 kb on - strand, within AO353_23080 at 5066.691 kb on - strand, within AO353_23080 at 5066.691 kb on - strand, within AO353_23080 at 5066.855 kb on + strand, within AO353_23080 at 5066.855 kb on + strand, within AO353_23080 at 5066.865 kb on + strand, within AO353_23080 at 5066.865 kb on + strand, within AO353_23080 at 5066.866 kb on - strand, within AO353_23080 at 5066.876 kb on - strand, within AO353_23080 at 5066.918 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.953 kb on + strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5066.954 kb on - strand, within AO353_23080 at 5067.003 kb on + strand at 5067.119 kb on + strand at 5067.119 kb on + strand at 5067.119 kb on + strand at 5067.120 kb on - strand at 5067.120 kb on - strand at 5067.120 kb on - strand at 5067.120 kb on - strand at 5067.130 kb on + strand at 5067.131 kb on - strand at 5067.131 kb on - strand at 5067.131 kb on - strand at 5067.131 kb on - strand at 5067.133 kb on - strand at 5067.157 kb on - strand at 5067.164 kb on - strand at 5067.164 kb on - strand at 5067.169 kb on - strand at 5067.182 kb on + strand at 5067.186 kb on + strand at 5067.195 kb on + strand at 5067.208 kb on + strand at 5067.208 kb on + strand at 5067.208 kb on + strand at 5067.209 kb on - strand at 5067.209 kb on - strand at 5067.209 kb on - strand at 5067.209 kb on - strand at 5067.291 kb on + strand at 5067.291 kb on + strand at 5067.291 kb on + strand at 5067.292 kb on - strand at 5067.292 kb on - strand at 5067.329 kb on + strand, within AO353_23085 at 5067.329 kb on + strand at 5067.329 kb on + strand, within AO353_23085 at 5067.329 kb on + strand, within AO353_23085 at 5067.329 kb on + strand, within AO353_23085 at 5067.330 kb on - strand, within AO353_23085 at 5067.330 kb on - strand, within AO353_23085 at 5067.330 kb on - strand, within AO353_23085 at 5067.330 kb on - strand, within AO353_23085 at 5067.506 kb on + strand, within AO353_23085 at 5067.507 kb on - strand, within AO353_23085 at 5067.601 kb on + strand, within AO353_23085 at 5067.786 kb on + strand, within AO353_23085 at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.816 kb on + strand at 5067.817 kb on - strand at 5067.817 kb on - strand at 5067.817 kb on - strand at 5067.849 kb on + strand at 5067.849 kb on + strand at 5067.849 kb on + strand at 5067.850 kb on - strand at 5067.904 kb on + strand at 5067.904 kb on + strand at 5067.904 kb on + strand at 5067.905 kb on - strand at 5067.918 kb on + strand at 5067.918 kb on + strand at 5067.919 kb on - strand at 5067.919 kb on - strand at 5067.919 kb on - strand at 5067.919 kb on - strand at 5067.949 kb on - strand at 5067.949 kb on - strand at 5067.949 kb on - strand at 5067.949 kb on - strand at 5068.008 kb on + strand at 5068.009 kb on - strand at 5068.009 kb on - strand at 5068.009 kb on - strand at 5068.075 kb on + strand at 5068.094 kb on + strand at 5068.094 kb on + strand at 5068.094 kb on + strand at 5068.095 kb on - strand at 5068.106 kb on + strand at 5068.107 kb on - strand at 5068.107 kb on - strand at 5068.153 kb on + strand at 5068.194 kb on + strand at 5068.194 kb on + strand at 5068.371 kb on - strand, within AO353_23090 at 5068.371 kb on - strand, within AO353_23090 at 5068.371 kb on - strand, within AO353_23090 at 5068.426 kb on - strand, within AO353_23090 at 5068.431 kb on + strand, within AO353_23090 at 5068.431 kb on + strand, within AO353_23090 at 5068.431 kb on + strand, within AO353_23090 at 5068.432 kb on - strand, within AO353_23090 at 5068.432 kb on - strand, within AO353_23090 at 5068.432 kb on - strand, within AO353_23090 at 5068.494 kb on + strand, within AO353_23090 at 5068.495 kb on - strand, within AO353_23090 at 5068.495 kb on - strand, within AO353_23090 at 5068.737 kb on - strand, within AO353_23090 at 5068.809 kb on + strand, within AO353_23090 at 5068.809 kb on + strand, within AO353_23090 at 5068.810 kb on - strand, within AO353_23090 at 5068.810 kb on - strand, within AO353_23090 at 5068.810 kb on - strand, within AO353_23090 at 5068.810 kb on - strand, within AO353_23090 at 5068.810 kb on - strand, within AO353_23090
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 5,066,295 + AO353_23080 0.36 +0.2 5,066,296 - AO353_23080 0.36 -0.7 5,066,359 - AO353_23080 0.41 +2.2 5,066,472 + AO353_23080 0.49 +0.9 5,066,472 + AO353_23080 0.49 +0.7 5,066,690 + AO353_23080 0.66 -0.6 5,066,690 + AO353_23080 0.66 -0.0 5,066,690 + AO353_23080 0.66 -0.3 5,066,690 + AO353_23080 0.66 -0.4 5,066,691 - AO353_23080 0.66 -2.0 5,066,691 - AO353_23080 0.66 +0.6 5,066,691 - AO353_23080 0.66 +0.2 5,066,691 - AO353_23080 0.66 -0.1 5,066,855 + AO353_23080 0.78 +0.4 5,066,855 + AO353_23080 0.78 -0.9 5,066,865 + AO353_23080 0.79 -0.4 5,066,865 + AO353_23080 0.79 -0.3 5,066,866 - AO353_23080 0.79 -0.8 5,066,876 - AO353_23080 0.80 -0.7 5,066,918 + AO353_23080 0.83 +1.0 5,066,953 + AO353_23080 0.85 -0.9 5,066,953 + AO353_23080 0.85 -0.5 5,066,953 + AO353_23080 0.85 +0.9 5,066,953 + AO353_23080 0.85 -0.2 5,066,953 + AO353_23080 0.85 -0.4 5,066,953 + AO353_23080 0.85 -2.6 5,066,953 + AO353_23080 0.85 -0.1 5,066,954 - AO353_23080 0.85 -1.4 5,066,954 - AO353_23080 0.85 +0.7 5,066,954 - AO353_23080 0.85 +0.9 5,066,954 - AO353_23080 0.85 +1.4 5,066,954 - AO353_23080 0.85 -0.4 5,066,954 - AO353_23080 0.85 -0.4 5,066,954 - AO353_23080 0.85 -1.5 5,066,954 - AO353_23080 0.85 -0.2 5,066,954 - AO353_23080 0.85 +0.3 5,066,954 - AO353_23080 0.85 +0.2 5,066,954 - AO353_23080 0.85 -0.6 5,066,954 - AO353_23080 0.85 -1.0 5,066,954 - AO353_23080 0.85 +0.1 5,066,954 - AO353_23080 0.85 +0.6 5,067,003 + +0.9 5,067,119 + +0.5 5,067,119 + +0.8 5,067,119 + +1.8 5,067,120 - -0.9 5,067,120 - -1.1 5,067,120 - +0.4 5,067,120 - -0.1 5,067,130 + -0.6 5,067,131 - +0.3 5,067,131 - -0.2 5,067,131 - -0.1 5,067,131 - +0.1 5,067,133 - -0.2 5,067,157 - -1.5 5,067,164 - +1.6 5,067,164 - -0.6 5,067,169 - +0.2 5,067,182 + -1.3 5,067,186 + -0.0 5,067,195 + -0.1 5,067,208 + -1.0 5,067,208 + -0.8 5,067,208 + -0.4 5,067,209 - +0.5 5,067,209 - -0.8 5,067,209 - +0.2 5,067,209 - -0.1 5,067,291 + -2.1 5,067,291 + -0.5 5,067,291 + -0.3 5,067,292 - +0.2 5,067,292 - -1.5 5,067,329 + AO353_23085 0.11 -0.8 5,067,329 + +2.2 5,067,329 + AO353_23085 0.11 -2.1 5,067,329 + AO353_23085 0.11 -0.7 5,067,329 + AO353_23085 0.11 -1.1 5,067,330 - AO353_23085 0.11 -2.3 5,067,330 - AO353_23085 0.11 +0.1 5,067,330 - AO353_23085 0.11 +0.3 5,067,330 - AO353_23085 0.11 -1.7 5,067,506 + AO353_23085 0.40 +0.2 5,067,507 - AO353_23085 0.40 -0.4 5,067,601 + AO353_23085 0.55 -0.3 5,067,786 + AO353_23085 0.85 -0.6 5,067,816 + +0.7 5,067,816 + -1.6 5,067,816 + +0.3 5,067,816 + -1.3 5,067,816 + +1.2 5,067,816 + -1.5 5,067,816 + -0.8 5,067,817 - +0.2 5,067,817 - +0.6 5,067,817 - -0.3 5,067,849 + +0.6 5,067,849 + -1.4 5,067,849 + -1.2 5,067,850 - -0.7 5,067,904 + +0.6 5,067,904 + +1.2 5,067,904 + -0.1 5,067,905 - -0.5 5,067,918 + +0.5 5,067,918 + -0.5 5,067,919 - -0.7 5,067,919 - -0.1 5,067,919 - +0.5 5,067,919 - -1.8 5,067,949 - +0.1 5,067,949 - +0.6 5,067,949 - -2.3 5,067,949 - -1.1 5,068,008 + +1.0 5,068,009 - +0.5 5,068,009 - -1.3 5,068,009 - +0.2 5,068,075 + +0.2 5,068,094 + -2.3 5,068,094 + +0.4 5,068,094 + +0.0 5,068,095 - -0.1 5,068,106 + +0.1 5,068,107 - +0.0 5,068,107 - +1.2 5,068,153 + -1.5 5,068,194 + +0.7 5,068,194 + -0.1 5,068,371 - AO353_23090 0.29 -0.6 5,068,371 - AO353_23090 0.29 -1.6 5,068,371 - AO353_23090 0.29 -2.8 5,068,426 - AO353_23090 0.35 -0.2 5,068,431 + AO353_23090 0.36 -2.0 5,068,431 + AO353_23090 0.36 -0.0 5,068,431 + AO353_23090 0.36 +0.6 5,068,432 - AO353_23090 0.36 +0.4 5,068,432 - AO353_23090 0.36 -0.8 5,068,432 - AO353_23090 0.36 +0.1 5,068,494 + AO353_23090 0.43 +0.1 5,068,495 - AO353_23090 0.43 +0.1 5,068,495 - AO353_23090 0.43 -0.7 5,068,737 - AO353_23090 0.70 -2.0 5,068,809 + AO353_23090 0.78 -0.8 5,068,809 + AO353_23090 0.78 -1.0 5,068,810 - AO353_23090 0.78 -0.8 5,068,810 - AO353_23090 0.78 -0.8 5,068,810 - AO353_23090 0.78 +0.2 5,068,810 - AO353_23090 0.78 +0.6 5,068,810 - AO353_23090 0.78 +0.2
Or see this region's nucleotide sequence