Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21015 and AO353_21020 overlap by 4 nucleotides AO353_21020 and AO353_21025 overlap by 4 nucleotides AO353_21025 and AO353_21030 overlap by 4 nucleotides AO353_21030 and AO353_21035 are separated by 263 nucleotides
AO353_21015: AO353_21015 - multidrug DMT transporter permease, at 4,593,099 to 4,594,430
_21015
AO353_21020: AO353_21020 - disulfide bond formation protein DsbA, at 4,594,427 to 4,595,092
_21020
AO353_21025: AO353_21025 - (2Fe-2S)-binding protein, at 4,595,089 to 4,595,415
_21025
AO353_21030: AO353_21030 - hypothetical protein, at 4,595,412 to 4,596,422
_21030
AO353_21035: AO353_21035 - AraC family transcriptional regulator, at 4,596,686 to 4,597,738
_21035
Position (kb)
4595
4596
4597 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4594.465 kb on + strand at 4594.466 kb on - strand at 4594.594 kb on - strand, within AO353_21020 at 4594.594 kb on - strand, within AO353_21020 at 4594.619 kb on + strand, within AO353_21020 at 4594.620 kb on - strand, within AO353_21020 at 4594.620 kb on - strand, within AO353_21020 at 4594.620 kb on - strand, within AO353_21020 at 4594.735 kb on + strand, within AO353_21020 at 4594.735 kb on + strand, within AO353_21020 at 4594.736 kb on - strand, within AO353_21020 at 4594.826 kb on + strand, within AO353_21020 at 4594.826 kb on + strand, within AO353_21020 at 4594.827 kb on - strand, within AO353_21020 at 4594.827 kb on - strand, within AO353_21020 at 4594.827 kb on - strand, within AO353_21020 at 4594.835 kb on + strand, within AO353_21020 at 4594.940 kb on + strand, within AO353_21020 at 4594.940 kb on + strand, within AO353_21020 at 4594.940 kb on + strand, within AO353_21020 at 4594.940 kb on + strand, within AO353_21020 at 4594.941 kb on - strand, within AO353_21020 at 4594.941 kb on - strand, within AO353_21020 at 4595.031 kb on + strand at 4595.031 kb on + strand at 4595.031 kb on + strand at 4595.031 kb on + strand at 4595.032 kb on - strand at 4595.032 kb on - strand at 4595.032 kb on - strand at 4595.032 kb on - strand at 4595.032 kb on - strand at 4595.032 kb on - strand at 4595.032 kb on - strand at 4595.032 kb on - strand at 4595.108 kb on + strand at 4595.109 kb on - strand at 4595.435 kb on + strand at 4595.435 kb on + strand at 4595.435 kb on + strand at 4595.435 kb on + strand at 4595.435 kb on + strand at 4595.436 kb on - strand at 4595.436 kb on - strand at 4595.441 kb on + strand at 4595.442 kb on - strand at 4595.520 kb on + strand, within AO353_21030 at 4595.521 kb on - strand, within AO353_21030 at 4595.651 kb on - strand, within AO353_21030 at 4595.897 kb on - strand, within AO353_21030 at 4595.919 kb on - strand, within AO353_21030 at 4596.019 kb on + strand, within AO353_21030 at 4596.019 kb on + strand, within AO353_21030 at 4596.019 kb on + strand, within AO353_21030 at 4596.061 kb on + strand, within AO353_21030 at 4596.062 kb on - strand, within AO353_21030 at 4596.062 kb on - strand, within AO353_21030 at 4596.062 kb on - strand, within AO353_21030 at 4596.062 kb on - strand, within AO353_21030 at 4596.062 kb on - strand, within AO353_21030 at 4596.062 kb on - strand, within AO353_21030 at 4596.212 kb on + strand, within AO353_21030 at 4596.421 kb on - strand at 4596.421 kb on - strand at 4596.454 kb on + strand at 4596.855 kb on + strand, within AO353_21035 at 4596.855 kb on + strand, within AO353_21035 at 4596.856 kb on - strand, within AO353_21035 at 4596.856 kb on - strand, within AO353_21035 at 4596.873 kb on + strand, within AO353_21035 at 4597.023 kb on + strand, within AO353_21035 at 4597.023 kb on + strand, within AO353_21035 at 4597.023 kb on + strand, within AO353_21035 at 4597.023 kb on + strand, within AO353_21035 at 4597.023 kb on + strand, within AO353_21035 at 4597.023 kb on + strand, within AO353_21035 at 4597.023 kb on + strand, within AO353_21035 at 4597.024 kb on - strand, within AO353_21035 at 4597.024 kb on - strand, within AO353_21035 at 4597.024 kb on - strand, within AO353_21035 at 4597.033 kb on + strand, within AO353_21035 at 4597.086 kb on + strand, within AO353_21035 at 4597.087 kb on - strand, within AO353_21035 at 4597.087 kb on - strand, within AO353_21035 at 4597.087 kb on - strand, within AO353_21035 at 4597.087 kb on - strand, within AO353_21035 at 4597.098 kb on + strand, within AO353_21035 at 4597.099 kb on - strand, within AO353_21035 at 4597.257 kb on + strand, within AO353_21035 at 4597.257 kb on + strand, within AO353_21035 at 4597.258 kb on - strand, within AO353_21035 at 4597.258 kb on - strand, within AO353_21035
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 4,594,465 + -0.4 4,594,466 - +2.1 4,594,594 - AO353_21020 0.25 -0.3 4,594,594 - AO353_21020 0.25 +0.8 4,594,619 + AO353_21020 0.29 +1.0 4,594,620 - AO353_21020 0.29 +0.1 4,594,620 - AO353_21020 0.29 -0.9 4,594,620 - AO353_21020 0.29 -1.9 4,594,735 + AO353_21020 0.46 +0.4 4,594,735 + AO353_21020 0.46 -1.4 4,594,736 - AO353_21020 0.46 +0.4 4,594,826 + AO353_21020 0.60 -0.7 4,594,826 + AO353_21020 0.60 +1.0 4,594,827 - AO353_21020 0.60 +0.2 4,594,827 - AO353_21020 0.60 -0.7 4,594,827 - AO353_21020 0.60 +0.2 4,594,835 + AO353_21020 0.61 +0.4 4,594,940 + AO353_21020 0.77 +0.9 4,594,940 + AO353_21020 0.77 +0.1 4,594,940 + AO353_21020 0.77 -1.6 4,594,940 + AO353_21020 0.77 -0.2 4,594,941 - AO353_21020 0.77 -0.6 4,594,941 - AO353_21020 0.77 +0.2 4,595,031 + -0.9 4,595,031 + +0.1 4,595,031 + +1.8 4,595,031 + -0.2 4,595,032 - -0.6 4,595,032 - +0.2 4,595,032 - +0.6 4,595,032 - -0.0 4,595,032 - -1.5 4,595,032 - -0.8 4,595,032 - +0.3 4,595,032 - -1.4 4,595,108 + -1.1 4,595,109 - -0.4 4,595,435 + +0.9 4,595,435 + +1.4 4,595,435 + +0.4 4,595,435 + +0.1 4,595,435 + -0.5 4,595,436 - +0.5 4,595,436 - -1.6 4,595,441 + +0.1 4,595,442 - -0.9 4,595,520 + AO353_21030 0.11 -0.7 4,595,521 - AO353_21030 0.11 -0.1 4,595,651 - AO353_21030 0.24 -0.4 4,595,897 - AO353_21030 0.48 -2.2 4,595,919 - AO353_21030 0.50 -0.8 4,596,019 + AO353_21030 0.60 -0.9 4,596,019 + AO353_21030 0.60 +1.4 4,596,019 + AO353_21030 0.60 -1.9 4,596,061 + AO353_21030 0.64 +0.2 4,596,062 - AO353_21030 0.64 -1.2 4,596,062 - AO353_21030 0.64 -1.3 4,596,062 - AO353_21030 0.64 +0.1 4,596,062 - AO353_21030 0.64 +1.7 4,596,062 - AO353_21030 0.64 -0.4 4,596,062 - AO353_21030 0.64 -0.5 4,596,212 + AO353_21030 0.79 -0.8 4,596,421 - -1.0 4,596,421 - -0.6 4,596,454 + +0.1 4,596,855 + AO353_21035 0.16 -0.9 4,596,855 + AO353_21035 0.16 +0.6 4,596,856 - AO353_21035 0.16 -0.4 4,596,856 - AO353_21035 0.16 -0.6 4,596,873 + AO353_21035 0.18 -1.1 4,597,023 + AO353_21035 0.32 +0.3 4,597,023 + AO353_21035 0.32 -0.8 4,597,023 + AO353_21035 0.32 +1.2 4,597,023 + AO353_21035 0.32 -1.0 4,597,023 + AO353_21035 0.32 -0.2 4,597,023 + AO353_21035 0.32 +0.9 4,597,023 + AO353_21035 0.32 +0.1 4,597,024 - AO353_21035 0.32 -0.2 4,597,024 - AO353_21035 0.32 -1.0 4,597,024 - AO353_21035 0.32 -0.1 4,597,033 + AO353_21035 0.33 +1.1 4,597,086 + AO353_21035 0.38 +0.0 4,597,087 - AO353_21035 0.38 -1.4 4,597,087 - AO353_21035 0.38 +0.6 4,597,087 - AO353_21035 0.38 -0.9 4,597,087 - AO353_21035 0.38 -0.6 4,597,098 + AO353_21035 0.39 +2.0 4,597,099 - AO353_21035 0.39 +0.3 4,597,257 + AO353_21035 0.54 -0.1 4,597,257 + AO353_21035 0.54 -0.2 4,597,258 - AO353_21035 0.54 -0.2 4,597,258 - AO353_21035 0.54 -0.6
Or see this region's nucleotide sequence