Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18575 and AO353_18580 overlap by 1 nucleotides AO353_18580 and AO353_18585 are separated by 80 nucleotides AO353_18585 and AO353_18590 are separated by 281 nucleotides
AO353_18575: AO353_18575 - tyrosine aminotransferase (EC 2.6.1.57) (from data) , at 4,086,880 to 4,088,073
_18575
AO353_18580: AO353_18580 - pterin-4-alpha-carbinolamine dehydratase, at 4,088,073 to 4,088,429
_18580
AO353_18585: AO353_18585 - Phenylalanine 4-monooxygenase (EC 1.14.16.1) (from data) , at 4,088,510 to 4,089,301
_18585
AO353_18590: AO353_18590 - AAA family ATPase, at 4,089,583 to 4,091,145
_18590
Position (kb)
4088
4089
4090 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4087.625 kb on + strand, within AO353_18575 at 4087.626 kb on - strand, within AO353_18575 at 4087.626 kb on - strand, within AO353_18575 at 4087.626 kb on - strand, within AO353_18575 at 4087.626 kb on - strand, within AO353_18575 at 4087.626 kb on - strand, within AO353_18575 at 4087.661 kb on + strand, within AO353_18575 at 4087.661 kb on + strand, within AO353_18575 at 4087.661 kb on + strand, within AO353_18575 at 4087.662 kb on - strand, within AO353_18575 at 4087.662 kb on - strand, within AO353_18575 at 4087.662 kb on - strand, within AO353_18575 at 4087.662 kb on - strand, within AO353_18575 at 4087.662 kb on - strand, within AO353_18575 at 4087.877 kb on + strand, within AO353_18575 at 4087.877 kb on + strand, within AO353_18575 at 4087.877 kb on + strand, within AO353_18575 at 4087.877 kb on + strand, within AO353_18575 at 4087.877 kb on + strand, within AO353_18575 at 4087.964 kb on + strand at 4087.964 kb on + strand at 4087.965 kb on - strand at 4088.013 kb on - strand at 4088.074 kb on + strand at 4088.074 kb on + strand at 4088.075 kb on - strand at 4088.075 kb on - strand at 4088.075 kb on - strand at 4088.456 kb on + strand at 4088.467 kb on - strand at 4088.637 kb on + strand, within AO353_18585 at 4088.637 kb on + strand, within AO353_18585 at 4088.637 kb on + strand, within AO353_18585 at 4088.637 kb on + strand, within AO353_18585 at 4088.637 kb on + strand, within AO353_18585 at 4088.637 kb on + strand, within AO353_18585 at 4088.637 kb on + strand, within AO353_18585 at 4088.637 kb on + strand, within AO353_18585 at 4088.637 kb on + strand, within AO353_18585 at 4088.637 kb on + strand, within AO353_18585 at 4088.638 kb on - strand, within AO353_18585 at 4088.638 kb on - strand, within AO353_18585 at 4088.638 kb on - strand at 4088.638 kb on - strand, within AO353_18585 at 4088.638 kb on - strand, within AO353_18585 at 4088.638 kb on - strand, within AO353_18585 at 4088.638 kb on - strand, within AO353_18585 at 4088.638 kb on - strand, within AO353_18585 at 4088.638 kb on - strand, within AO353_18585 at 4088.638 kb on - strand, within AO353_18585 at 4088.638 kb on - strand, within AO353_18585 at 4088.638 kb on - strand, within AO353_18585 at 4088.665 kb on - strand, within AO353_18585 at 4088.727 kb on + strand, within AO353_18585 at 4088.727 kb on + strand, within AO353_18585 at 4088.727 kb on + strand, within AO353_18585 at 4088.728 kb on - strand, within AO353_18585 at 4088.728 kb on - strand, within AO353_18585 at 4088.766 kb on + strand, within AO353_18585 at 4088.767 kb on - strand, within AO353_18585 at 4088.767 kb on - strand, within AO353_18585 at 4088.820 kb on + strand, within AO353_18585 at 4088.835 kb on + strand, within AO353_18585 at 4088.836 kb on - strand, within AO353_18585 at 4088.862 kb on - strand, within AO353_18585 at 4088.877 kb on + strand, within AO353_18585 at 4088.877 kb on + strand, within AO353_18585 at 4088.878 kb on - strand, within AO353_18585 at 4088.964 kb on + strand, within AO353_18585 at 4088.964 kb on + strand, within AO353_18585 at 4088.965 kb on - strand, within AO353_18585 at 4088.989 kb on + strand, within AO353_18585 at 4088.989 kb on + strand, within AO353_18585 at 4088.990 kb on - strand, within AO353_18585 at 4088.990 kb on - strand, within AO353_18585 at 4089.023 kb on + strand, within AO353_18585 at 4089.024 kb on - strand, within AO353_18585 at 4089.165 kb on + strand, within AO353_18585 at 4089.165 kb on + strand at 4089.165 kb on + strand, within AO353_18585 at 4089.165 kb on + strand, within AO353_18585 at 4089.165 kb on + strand, within AO353_18585 at 4089.166 kb on - strand, within AO353_18585 at 4089.166 kb on - strand, within AO353_18585 at 4089.166 kb on - strand, within AO353_18585 at 4089.166 kb on - strand, within AO353_18585 at 4089.166 kb on - strand, within AO353_18585 at 4089.166 kb on - strand, within AO353_18585 at 4089.166 kb on - strand, within AO353_18585 at 4089.247 kb on - strand at 4089.247 kb on - strand at 4089.247 kb on - strand at 4089.247 kb on - strand at 4089.247 kb on - strand at 4089.253 kb on + strand at 4089.254 kb on - strand at 4089.254 kb on - strand at 4089.254 kb on - strand at 4089.254 kb on - strand at 4089.254 kb on - strand at 4089.285 kb on + strand at 4089.285 kb on + strand at 4089.285 kb on + strand at 4089.285 kb on + strand at 4089.285 kb on + strand at 4089.286 kb on - strand at 4089.286 kb on - strand at 4089.286 kb on - strand at 4089.286 kb on - strand at 4089.286 kb on - strand at 4089.322 kb on + strand at 4089.322 kb on + strand at 4089.333 kb on + strand at 4089.333 kb on + strand at 4089.333 kb on + strand at 4089.333 kb on + strand at 4089.333 kb on + strand at 4089.333 kb on + strand at 4089.333 kb on + strand at 4089.333 kb on + strand at 4089.334 kb on - strand at 4089.334 kb on - strand at 4089.334 kb on - strand at 4089.334 kb on - strand at 4089.355 kb on - strand at 4089.355 kb on - strand at 4089.361 kb on - strand at 4089.460 kb on + strand at 4089.460 kb on + strand at 4089.460 kb on + strand at 4089.465 kb on - strand at 4089.465 kb on - strand at 4089.562 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.580 kb on + strand at 4089.581 kb on - strand at 4089.581 kb on - strand at 4089.581 kb on - strand at 4089.581 kb on - strand at 4089.581 kb on - strand at 4089.581 kb on - strand at 4089.581 kb on - strand at 4089.581 kb on - strand at 4089.582 kb on + strand at 4089.582 kb on + strand at 4089.582 kb on + strand at 4089.582 kb on + strand at 4089.582 kb on + strand at 4089.582 kb on + strand at 4089.582 kb on + strand at 4089.583 kb on - strand at 4089.583 kb on - strand at 4089.583 kb on - strand at 4089.583 kb on - strand at 4089.588 kb on + strand at 4089.589 kb on - strand at 4089.706 kb on + strand at 4089.707 kb on - strand at 4089.707 kb on - strand at 4089.707 kb on - strand at 4089.707 kb on - strand at 4089.707 kb on - strand at 4089.779 kb on + strand, within AO353_18590 at 4089.779 kb on + strand, within AO353_18590 at 4089.780 kb on - strand, within AO353_18590 at 4089.780 kb on - strand, within AO353_18590 at 4089.780 kb on - strand, within AO353_18590 at 4089.970 kb on + strand, within AO353_18590 at 4089.971 kb on - strand at 4090.011 kb on + strand, within AO353_18590 at 4090.011 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand, within AO353_18590 at 4090.162 kb on + strand at 4090.162 kb on + strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.163 kb on - strand, within AO353_18590 at 4090.165 kb on - strand, within AO353_18590
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 4,087,625 + AO353_18575 0.62 -1.0 4,087,626 - AO353_18575 0.62 -1.4 4,087,626 - AO353_18575 0.62 -0.6 4,087,626 - AO353_18575 0.62 +1.0 4,087,626 - AO353_18575 0.62 +0.4 4,087,626 - AO353_18575 0.62 -0.3 4,087,661 + AO353_18575 0.65 -0.3 4,087,661 + AO353_18575 0.65 +0.4 4,087,661 + AO353_18575 0.65 +0.6 4,087,662 - AO353_18575 0.65 -1.6 4,087,662 - AO353_18575 0.65 -0.7 4,087,662 - AO353_18575 0.65 -0.7 4,087,662 - AO353_18575 0.65 +0.6 4,087,662 - AO353_18575 0.65 -0.6 4,087,877 + AO353_18575 0.84 +0.6 4,087,877 + AO353_18575 0.84 +0.5 4,087,877 + AO353_18575 0.84 -0.6 4,087,877 + AO353_18575 0.84 +1.0 4,087,877 + AO353_18575 0.84 -0.8 4,087,964 + +1.4 4,087,964 + -0.3 4,087,965 - +0.3 4,088,013 - +0.0 4,088,074 + +0.8 4,088,074 + +0.8 4,088,075 - +1.0 4,088,075 - +0.6 4,088,075 - -0.7 4,088,456 + -0.0 4,088,467 - +0.7 4,088,637 + AO353_18585 0.16 -2.8 4,088,637 + AO353_18585 0.16 -0.6 4,088,637 + AO353_18585 0.16 -1.8 4,088,637 + AO353_18585 0.16 -1.3 4,088,637 + AO353_18585 0.16 -1.1 4,088,637 + AO353_18585 0.16 +0.1 4,088,637 + AO353_18585 0.16 -0.9 4,088,637 + AO353_18585 0.16 -0.4 4,088,637 + AO353_18585 0.16 -1.7 4,088,637 + AO353_18585 0.16 -1.6 4,088,638 - AO353_18585 0.16 -1.7 4,088,638 - AO353_18585 0.16 -0.5 4,088,638 - -0.4 4,088,638 - AO353_18585 0.16 -0.4 4,088,638 - AO353_18585 0.16 -2.7 4,088,638 - AO353_18585 0.16 +0.9 4,088,638 - AO353_18585 0.16 -1.1 4,088,638 - AO353_18585 0.16 -1.1 4,088,638 - AO353_18585 0.16 -1.8 4,088,638 - AO353_18585 0.16 -0.7 4,088,638 - AO353_18585 0.16 -0.7 4,088,638 - AO353_18585 0.16 -1.2 4,088,665 - AO353_18585 0.20 -0.4 4,088,727 + AO353_18585 0.27 -0.9 4,088,727 + AO353_18585 0.27 -0.7 4,088,727 + AO353_18585 0.27 -1.2 4,088,728 - AO353_18585 0.28 -1.7 4,088,728 - AO353_18585 0.28 -1.1 4,088,766 + AO353_18585 0.32 -1.6 4,088,767 - AO353_18585 0.32 -0.7 4,088,767 - AO353_18585 0.32 +0.2 4,088,820 + AO353_18585 0.39 -0.0 4,088,835 + AO353_18585 0.41 -1.4 4,088,836 - AO353_18585 0.41 -1.7 4,088,862 - AO353_18585 0.44 -0.7 4,088,877 + AO353_18585 0.46 +0.2 4,088,877 + AO353_18585 0.46 -3.3 4,088,878 - AO353_18585 0.46 -2.5 4,088,964 + AO353_18585 0.57 -1.2 4,088,964 + AO353_18585 0.57 -1.9 4,088,965 - AO353_18585 0.57 +1.0 4,088,989 + AO353_18585 0.60 -1.7 4,088,989 + AO353_18585 0.60 -0.4 4,088,990 - AO353_18585 0.61 -2.1 4,088,990 - AO353_18585 0.61 -2.1 4,089,023 + AO353_18585 0.65 -1.7 4,089,024 - AO353_18585 0.65 -1.4 4,089,165 + AO353_18585 0.83 +0.3 4,089,165 + +1.0 4,089,165 + AO353_18585 0.83 -1.9 4,089,165 + AO353_18585 0.83 -2.1 4,089,165 + AO353_18585 0.83 -1.4 4,089,166 - AO353_18585 0.83 -1.0 4,089,166 - AO353_18585 0.83 -0.5 4,089,166 - AO353_18585 0.83 -1.1 4,089,166 - AO353_18585 0.83 -1.2 4,089,166 - AO353_18585 0.83 -0.7 4,089,166 - AO353_18585 0.83 -1.7 4,089,166 - AO353_18585 0.83 +0.2 4,089,247 - +0.6 4,089,247 - -1.3 4,089,247 - -1.6 4,089,247 - -1.4 4,089,247 - -1.3 4,089,253 + -0.1 4,089,254 - -1.7 4,089,254 - -0.7 4,089,254 - -1.9 4,089,254 - -0.7 4,089,254 - -1.1 4,089,285 + -1.4 4,089,285 + +1.0 4,089,285 + -2.3 4,089,285 + -0.5 4,089,285 + -0.9 4,089,286 - -0.7 4,089,286 - +0.5 4,089,286 - -1.7 4,089,286 - -0.0 4,089,286 - -1.4 4,089,322 + -0.9 4,089,322 + -0.0 4,089,333 + -2.1 4,089,333 + -2.3 4,089,333 + -0.3 4,089,333 + -1.5 4,089,333 + +0.2 4,089,333 + -1.6 4,089,333 + -0.1 4,089,333 + +0.2 4,089,334 - -0.1 4,089,334 - -1.5 4,089,334 - +0.8 4,089,334 - +0.6 4,089,355 - +1.9 4,089,355 - +1.3 4,089,361 - +1.1 4,089,460 + -1.0 4,089,460 + +1.4 4,089,460 + -1.4 4,089,465 - -0.7 4,089,465 - +1.3 4,089,562 + -0.4 4,089,580 + -0.2 4,089,580 + +0.4 4,089,580 + -0.1 4,089,580 + -1.6 4,089,580 + -0.5 4,089,580 + -0.4 4,089,580 + -0.3 4,089,580 + -0.7 4,089,580 + -1.0 4,089,580 + -0.7 4,089,580 + +0.6 4,089,580 + -0.4 4,089,580 + +0.2 4,089,581 - -1.4 4,089,581 - +1.0 4,089,581 - +1.2 4,089,581 - -0.4 4,089,581 - -0.7 4,089,581 - -0.2 4,089,581 - -0.2 4,089,581 - -1.1 4,089,582 + -1.9 4,089,582 + +0.6 4,089,582 + -0.1 4,089,582 + +0.4 4,089,582 + +1.2 4,089,582 + -0.3 4,089,582 + -0.3 4,089,583 - +0.1 4,089,583 - +0.8 4,089,583 - -0.0 4,089,583 - +2.2 4,089,588 + -1.3 4,089,589 - +1.2 4,089,706 + -2.5 4,089,707 - +0.2 4,089,707 - +0.2 4,089,707 - +0.8 4,089,707 - -1.0 4,089,707 - -1.6 4,089,779 + AO353_18590 0.13 -1.8 4,089,779 + AO353_18590 0.13 +0.3 4,089,780 - AO353_18590 0.13 +0.8 4,089,780 - AO353_18590 0.13 -2.1 4,089,780 - AO353_18590 0.13 +0.2 4,089,970 + AO353_18590 0.25 -1.4 4,089,971 - +1.6 4,090,011 + AO353_18590 0.27 +0.9 4,090,011 + AO353_18590 0.27 -1.7 4,090,162 + AO353_18590 0.37 -1.2 4,090,162 + AO353_18590 0.37 -0.6 4,090,162 + AO353_18590 0.37 +0.4 4,090,162 + AO353_18590 0.37 -1.0 4,090,162 + AO353_18590 0.37 -0.0 4,090,162 + AO353_18590 0.37 -0.2 4,090,162 + AO353_18590 0.37 -1.1 4,090,162 + -0.0 4,090,162 + AO353_18590 0.37 +2.2 4,090,162 + AO353_18590 0.37 -1.4 4,090,162 + AO353_18590 0.37 -0.3 4,090,162 + AO353_18590 0.37 -1.0 4,090,162 + AO353_18590 0.37 -0.9 4,090,162 + +0.6 4,090,162 + AO353_18590 0.37 -2.3 4,090,163 - AO353_18590 0.37 -0.0 4,090,163 - AO353_18590 0.37 +0.5 4,090,163 - AO353_18590 0.37 -0.2 4,090,163 - AO353_18590 0.37 -0.4 4,090,163 - AO353_18590 0.37 -0.0 4,090,163 - AO353_18590 0.37 -0.6 4,090,163 - AO353_18590 0.37 -1.7 4,090,163 - AO353_18590 0.37 -0.2 4,090,163 - AO353_18590 0.37 -1.5 4,090,163 - AO353_18590 0.37 -0.2 4,090,163 - AO353_18590 0.37 +0.2 4,090,163 - AO353_18590 0.37 +0.7 4,090,165 - AO353_18590 0.37 -1.2
Or see this region's nucleotide sequence