Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18415 and AO353_18420 are separated by 148 nucleotides AO353_18420 and AO353_18425 are separated by 10 nucleotides AO353_18425 and AO353_18430 are separated by 313 nucleotides
AO353_18415: AO353_18415 - hypothetical protein, at 4,056,038 to 4,057,978
_18415
AO353_18420: AO353_18420 - hypothetical protein, at 4,058,127 to 4,058,522
_18420
AO353_18425: AO353_18425 - hypothetical protein, at 4,058,533 to 4,059,120
_18425
AO353_18430: AO353_18430 - ATP-dependent DNA helicase RecQ, at 4,059,434 to 4,061,563
_18430
Position (kb)
4058
4059
4060 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4057.538 kb on - strand, within AO353_18415 at 4057.538 kb on - strand, within AO353_18415 at 4057.538 kb on - strand, within AO353_18415 at 4057.616 kb on + strand, within AO353_18415 at 4057.744 kb on + strand, within AO353_18415 at 4057.755 kb on + strand, within AO353_18415 at 4057.755 kb on + strand, within AO353_18415 at 4057.756 kb on - strand, within AO353_18415 at 4057.756 kb on - strand, within AO353_18415 at 4057.756 kb on - strand, within AO353_18415 at 4057.877 kb on + strand at 4057.877 kb on + strand at 4057.877 kb on + strand at 4057.877 kb on + strand at 4057.878 kb on - strand at 4057.878 kb on - strand at 4057.878 kb on - strand at 4057.878 kb on - strand at 4058.017 kb on + strand at 4058.017 kb on + strand at 4058.017 kb on + strand at 4058.017 kb on + strand at 4058.017 kb on + strand at 4058.018 kb on - strand at 4058.018 kb on - strand at 4058.018 kb on - strand at 4058.018 kb on - strand at 4058.018 kb on - strand at 4058.018 kb on - strand at 4058.018 kb on - strand at 4058.018 kb on - strand at 4058.018 kb on - strand at 4058.052 kb on + strand at 4058.052 kb on + strand at 4058.110 kb on + strand at 4058.110 kb on + strand at 4058.110 kb on + strand at 4058.111 kb on - strand at 4058.111 kb on - strand at 4058.111 kb on - strand at 4058.125 kb on - strand at 4058.159 kb on + strand at 4058.159 kb on + strand at 4058.159 kb on + strand at 4058.159 kb on + strand at 4058.160 kb on - strand at 4058.160 kb on - strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.161 kb on + strand at 4058.162 kb on + strand at 4058.162 kb on - strand at 4058.162 kb on - strand at 4058.162 kb on - strand at 4058.162 kb on - strand at 4058.162 kb on - strand at 4058.162 kb on - strand at 4058.162 kb on - strand at 4058.162 kb on - strand at 4058.266 kb on + strand, within AO353_18420 at 4058.266 kb on + strand, within AO353_18420 at 4058.267 kb on - strand, within AO353_18420 at 4058.267 kb on - strand, within AO353_18420 at 4058.305 kb on + strand, within AO353_18420 at 4058.305 kb on + strand, within AO353_18420 at 4058.305 kb on + strand, within AO353_18420 at 4058.306 kb on - strand, within AO353_18420 at 4058.353 kb on + strand, within AO353_18420 at 4058.353 kb on + strand, within AO353_18420 at 4058.353 kb on + strand, within AO353_18420 at 4058.354 kb on - strand, within AO353_18420 at 4058.419 kb on - strand, within AO353_18420 at 4058.482 kb on + strand, within AO353_18420 at 4058.483 kb on - strand at 4058.508 kb on + strand at 4058.534 kb on + strand at 4058.534 kb on + strand at 4058.534 kb on + strand at 4058.535 kb on - strand at 4058.535 kb on - strand at 4058.535 kb on - strand at 4058.535 kb on - strand at 4058.591 kb on + strand at 4058.592 kb on - strand, within AO353_18425 at 4058.592 kb on - strand, within AO353_18425 at 4058.592 kb on - strand, within AO353_18425 at 4058.887 kb on - strand, within AO353_18425 at 4059.026 kb on + strand, within AO353_18425 at 4059.026 kb on + strand, within AO353_18425 at 4059.027 kb on - strand, within AO353_18425 at 4059.044 kb on + strand, within AO353_18425 at 4059.044 kb on + strand, within AO353_18425 at 4059.044 kb on + strand, within AO353_18425 at 4059.044 kb on + strand, within AO353_18425 at 4059.044 kb on + strand, within AO353_18425 at 4059.045 kb on - strand, within AO353_18425 at 4059.045 kb on - strand, within AO353_18425 at 4059.045 kb on - strand, within AO353_18425 at 4059.045 kb on - strand, within AO353_18425 at 4059.045 kb on - strand, within AO353_18425 at 4059.100 kb on + strand at 4059.100 kb on + strand at 4059.129 kb on + strand at 4059.141 kb on - strand at 4059.142 kb on + strand at 4059.142 kb on + strand at 4059.142 kb on + strand at 4059.142 kb on + strand at 4059.142 kb on + strand at 4059.142 kb on + strand at 4059.142 kb on + strand at 4059.142 kb on + strand at 4059.142 kb on + strand at 4059.142 kb on + strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.143 kb on - strand at 4059.157 kb on + strand at 4059.218 kb on + strand at 4059.218 kb on + strand at 4059.260 kb on + strand at 4059.260 kb on + strand at 4059.298 kb on + strand at 4059.299 kb on - strand at 4059.300 kb on + strand at 4059.300 kb on + strand at 4059.300 kb on + strand at 4059.300 kb on + strand at 4059.300 kb on + strand at 4059.301 kb on - strand at 4059.301 kb on - strand at 4059.409 kb on + strand at 4059.410 kb on - strand at 4059.410 kb on - strand at 4059.767 kb on + strand, within AO353_18430 at 4059.768 kb on - strand, within AO353_18430 at 4059.893 kb on + strand, within AO353_18430 at 4059.893 kb on + strand, within AO353_18430 at 4059.894 kb on - strand, within AO353_18430 at 4060.053 kb on - strand, within AO353_18430
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 4,057,538 - AO353_18415 0.77 +0.4 4,057,538 - AO353_18415 0.77 +3.9 4,057,538 - AO353_18415 0.77 -2.1 4,057,616 + AO353_18415 0.81 +0.8 4,057,744 + AO353_18415 0.88 +0.7 4,057,755 + AO353_18415 0.88 -1.1 4,057,755 + AO353_18415 0.88 +0.2 4,057,756 - AO353_18415 0.89 +0.2 4,057,756 - AO353_18415 0.89 -1.2 4,057,756 - AO353_18415 0.89 +1.2 4,057,877 + -0.2 4,057,877 + -1.4 4,057,877 + +0.7 4,057,877 + -0.0 4,057,878 - -0.9 4,057,878 - +0.8 4,057,878 - -0.2 4,057,878 - -1.1 4,058,017 + -1.0 4,058,017 + -1.0 4,058,017 + -0.0 4,058,017 + -0.9 4,058,017 + +0.4 4,058,018 - -1.1 4,058,018 - -0.4 4,058,018 - +0.7 4,058,018 - +0.6 4,058,018 - +2.3 4,058,018 - +0.6 4,058,018 - -0.7 4,058,018 - +1.5 4,058,018 - -0.0 4,058,052 + -1.1 4,058,052 + +0.3 4,058,110 + +1.0 4,058,110 + +0.4 4,058,110 + +0.3 4,058,111 - -0.4 4,058,111 - +1.8 4,058,111 - -0.3 4,058,125 - -1.2 4,058,159 + +1.6 4,058,159 + -0.7 4,058,159 + +1.6 4,058,159 + -1.1 4,058,160 - -0.3 4,058,160 - -1.4 4,058,161 + -0.1 4,058,161 + -0.1 4,058,161 + +0.4 4,058,161 + -0.4 4,058,161 + -1.1 4,058,161 + +0.6 4,058,161 + -0.0 4,058,161 + -0.3 4,058,161 + +0.6 4,058,161 + -0.8 4,058,161 + -1.4 4,058,161 + +1.1 4,058,161 + +0.7 4,058,161 + -2.5 4,058,161 + +0.1 4,058,161 + +0.7 4,058,161 + -0.5 4,058,161 + -0.3 4,058,161 + -0.6 4,058,161 + -0.5 4,058,161 + -0.5 4,058,161 + +0.6 4,058,161 + +0.6 4,058,162 + +0.8 4,058,162 - +0.4 4,058,162 - +0.1 4,058,162 - -0.7 4,058,162 - +0.6 4,058,162 - +0.8 4,058,162 - -0.8 4,058,162 - -0.0 4,058,162 - +0.2 4,058,266 + AO353_18420 0.35 -1.2 4,058,266 + AO353_18420 0.35 +0.8 4,058,267 - AO353_18420 0.35 -0.8 4,058,267 - AO353_18420 0.35 +0.4 4,058,305 + AO353_18420 0.45 -0.6 4,058,305 + AO353_18420 0.45 -0.8 4,058,305 + AO353_18420 0.45 -1.7 4,058,306 - AO353_18420 0.45 -0.2 4,058,353 + AO353_18420 0.57 +1.0 4,058,353 + AO353_18420 0.57 +0.3 4,058,353 + AO353_18420 0.57 -2.0 4,058,354 - AO353_18420 0.57 -0.9 4,058,419 - AO353_18420 0.74 -0.1 4,058,482 + AO353_18420 0.90 +0.2 4,058,483 - +0.6 4,058,508 + -0.7 4,058,534 + +0.3 4,058,534 + +0.6 4,058,534 + -0.6 4,058,535 - +0.1 4,058,535 - +0.6 4,058,535 - -1.1 4,058,535 - -2.1 4,058,591 + -1.4 4,058,592 - AO353_18425 0.10 +0.3 4,058,592 - AO353_18425 0.10 -1.0 4,058,592 - AO353_18425 0.10 +0.0 4,058,887 - AO353_18425 0.60 -1.4 4,059,026 + AO353_18425 0.84 -0.4 4,059,026 + AO353_18425 0.84 -2.8 4,059,027 - AO353_18425 0.84 +0.4 4,059,044 + AO353_18425 0.87 -0.4 4,059,044 + AO353_18425 0.87 +0.4 4,059,044 + AO353_18425 0.87 +0.6 4,059,044 + AO353_18425 0.87 +0.4 4,059,044 + AO353_18425 0.87 -2.0 4,059,045 - AO353_18425 0.87 -0.4 4,059,045 - AO353_18425 0.87 -3.0 4,059,045 - AO353_18425 0.87 -0.6 4,059,045 - AO353_18425 0.87 +0.6 4,059,045 - AO353_18425 0.87 -0.7 4,059,100 + +0.1 4,059,100 + -0.4 4,059,129 + +0.8 4,059,141 - -0.7 4,059,142 + +0.8 4,059,142 + -0.8 4,059,142 + +0.3 4,059,142 + -1.7 4,059,142 + +0.4 4,059,142 + -0.0 4,059,142 + -1.4 4,059,142 + -1.8 4,059,142 + -1.7 4,059,142 + -1.2 4,059,143 - +1.1 4,059,143 - -0.7 4,059,143 - -1.0 4,059,143 - -0.2 4,059,143 - -0.3 4,059,143 - -1.7 4,059,143 - -1.9 4,059,143 - -1.9 4,059,143 - -2.3 4,059,143 - +0.6 4,059,143 - -0.4 4,059,143 - -0.0 4,059,143 - -0.2 4,059,143 - -0.3 4,059,157 + -0.7 4,059,218 + -0.2 4,059,218 + -0.3 4,059,260 + +1.3 4,059,260 + -1.7 4,059,298 + +0.3 4,059,299 - -0.1 4,059,300 + -0.0 4,059,300 + +0.3 4,059,300 + -0.6 4,059,300 + -0.0 4,059,300 + -1.2 4,059,301 - +0.3 4,059,301 - -0.4 4,059,409 + -0.0 4,059,410 - -0.0 4,059,410 - -0.1 4,059,767 + AO353_18430 0.16 -0.9 4,059,768 - AO353_18430 0.16 -1.1 4,059,893 + AO353_18430 0.22 -0.4 4,059,893 + AO353_18430 0.22 -0.3 4,059,894 - AO353_18430 0.22 +0.1 4,060,053 - AO353_18430 0.29 -0.7
Or see this region's nucleotide sequence