Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13140 and AO353_13145 are separated by 93 nucleotides AO353_13145 and AO353_13150 are separated by 12 nucleotides AO353_13150 and AO353_13155 are separated by 96 nucleotides
AO353_13140: AO353_13140 - tRNA dimethylallyltransferase, at 2,912,523 to 2,913,494
_13140
AO353_13145: AO353_13145 - RNA-binding protein, at 2,913,588 to 2,913,848
_13145
AO353_13150: AO353_13150 - GTPase HflX, at 2,913,861 to 2,915,162
_13150
AO353_13155: AO353_13155 - hypothetical protein, at 2,915,259 to 2,916,425
_13155
Position (kb)
2913
2914
2915
2916 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2913.050 kb on + strand, within AO353_13140 at 2913.125 kb on + strand, within AO353_13140 at 2913.125 kb on + strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.180 kb on - strand, within AO353_13140 at 2913.183 kb on - strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.277 kb on + strand, within AO353_13140 at 2913.278 kb on - strand, within AO353_13140 at 2913.286 kb on + strand, within AO353_13140 at 2913.286 kb on + strand, within AO353_13140 at 2913.287 kb on - strand, within AO353_13140 at 2913.415 kb on + strand at 2913.465 kb on + strand at 2913.513 kb on + strand at 2913.535 kb on + strand at 2913.548 kb on + strand at 2913.548 kb on + strand at 2913.552 kb on + strand at 2913.552 kb on + strand at 2913.558 kb on + strand at 2913.558 kb on + strand at 2913.558 kb on + strand at 2913.572 kb on + strand at 2913.839 kb on + strand at 2913.849 kb on + strand at 2913.849 kb on + strand at 2913.849 kb on + strand at 2913.850 kb on - strand at 2913.998 kb on + strand, within AO353_13150 at 2914.029 kb on + strand, within AO353_13150 at 2914.029 kb on + strand, within AO353_13150 at 2914.029 kb on + strand, within AO353_13150 at 2914.029 kb on + strand, within AO353_13150 at 2914.029 kb on + strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.030 kb on - strand, within AO353_13150 at 2914.097 kb on + strand, within AO353_13150 at 2914.097 kb on + strand, within AO353_13150 at 2914.098 kb on - strand, within AO353_13150 at 2914.133 kb on + strand, within AO353_13150 at 2914.133 kb on + strand, within AO353_13150 at 2914.134 kb on - strand, within AO353_13150 at 2914.190 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.254 kb on + strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.255 kb on - strand, within AO353_13150 at 2914.262 kb on + strand, within AO353_13150 at 2914.476 kb on + strand, within AO353_13150 at 2914.476 kb on + strand, within AO353_13150 at 2914.477 kb on - strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.478 kb on + strand, within AO353_13150 at 2914.479 kb on - strand, within AO353_13150 at 2914.479 kb on - strand, within AO353_13150 at 2914.607 kb on - strand, within AO353_13150 at 2914.670 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.809 kb on + strand, within AO353_13150 at 2914.810 kb on - strand, within AO353_13150 at 2914.810 kb on - strand, within AO353_13150 at 2914.810 kb on - strand, within AO353_13150 at 2914.811 kb on + strand, within AO353_13150 at 2914.812 kb on - strand, within AO353_13150 at 2914.812 kb on - strand, within AO353_13150 at 2914.812 kb on - strand, within AO353_13150 at 2915.160 kb on + strand at 2915.160 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.204 kb on + strand at 2915.292 kb on - strand at 2915.312 kb on + strand at 2915.502 kb on + strand, within AO353_13155 at 2915.514 kb on + strand, within AO353_13155 at 2915.562 kb on + strand, within AO353_13155 at 2915.595 kb on + strand, within AO353_13155 at 2915.595 kb on + strand, within AO353_13155 at 2915.595 kb on + strand, within AO353_13155 at 2915.596 kb on - strand, within AO353_13155 at 2915.619 kb on + strand, within AO353_13155 at 2915.650 kb on - strand, within AO353_13155 at 2915.716 kb on - strand, within AO353_13155
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 2,913,050 + AO353_13140 0.54 -0.8 2,913,125 + AO353_13140 0.62 +0.0 2,913,125 + AO353_13140 0.62 +0.4 2,913,126 - AO353_13140 0.62 -1.8 2,913,126 - AO353_13140 0.62 +0.0 2,913,126 - AO353_13140 0.62 -1.7 2,913,180 - AO353_13140 0.68 -0.6 2,913,183 - AO353_13140 0.68 -0.1 2,913,242 + AO353_13140 0.74 +0.2 2,913,242 + AO353_13140 0.74 +0.0 2,913,242 + AO353_13140 0.74 -1.7 2,913,277 + AO353_13140 0.78 +0.4 2,913,278 - AO353_13140 0.78 +0.4 2,913,286 + AO353_13140 0.78 -1.6 2,913,286 + AO353_13140 0.78 +2.0 2,913,287 - AO353_13140 0.79 -1.8 2,913,415 + -1.6 2,913,465 + +0.0 2,913,513 + +0.4 2,913,535 + -0.1 2,913,548 + +0.6 2,913,548 + +0.4 2,913,552 + -0.7 2,913,552 + -1.8 2,913,558 + -0.6 2,913,558 + +1.2 2,913,558 + -1.3 2,913,572 + -1.2 2,913,839 + -0.6 2,913,849 + -0.1 2,913,849 + -0.9 2,913,849 + -0.6 2,913,850 - -2.4 2,913,998 + AO353_13150 0.11 +0.2 2,914,029 + AO353_13150 0.13 -0.3 2,914,029 + AO353_13150 0.13 +0.5 2,914,029 + AO353_13150 0.13 -1.3 2,914,029 + AO353_13150 0.13 -1.7 2,914,029 + AO353_13150 0.13 -1.9 2,914,030 - AO353_13150 0.13 -0.5 2,914,030 - AO353_13150 0.13 +1.4 2,914,030 - AO353_13150 0.13 +1.0 2,914,030 - AO353_13150 0.13 -0.3 2,914,030 - AO353_13150 0.13 -0.4 2,914,030 - AO353_13150 0.13 -1.0 2,914,097 + AO353_13150 0.18 -0.4 2,914,097 + AO353_13150 0.18 -2.6 2,914,098 - AO353_13150 0.18 -1.3 2,914,133 + AO353_13150 0.21 +0.4 2,914,133 + AO353_13150 0.21 -0.4 2,914,134 - AO353_13150 0.21 -0.8 2,914,190 + AO353_13150 0.25 +0.2 2,914,254 + AO353_13150 0.30 -0.7 2,914,254 + AO353_13150 0.30 -1.0 2,914,254 + AO353_13150 0.30 -1.2 2,914,254 + AO353_13150 0.30 -1.6 2,914,254 + AO353_13150 0.30 -1.8 2,914,254 + AO353_13150 0.30 -0.7 2,914,255 - AO353_13150 0.30 -1.1 2,914,255 - AO353_13150 0.30 +0.4 2,914,255 - AO353_13150 0.30 -2.6 2,914,255 - AO353_13150 0.30 +1.0 2,914,255 - AO353_13150 0.30 -1.6 2,914,255 - AO353_13150 0.30 +0.2 2,914,255 - AO353_13150 0.30 -0.6 2,914,262 + AO353_13150 0.31 -1.9 2,914,476 + AO353_13150 0.47 +0.8 2,914,476 + AO353_13150 0.47 -0.2 2,914,477 - AO353_13150 0.47 -0.6 2,914,478 + AO353_13150 0.47 -0.2 2,914,478 + AO353_13150 0.47 -0.5 2,914,478 + AO353_13150 0.47 -0.3 2,914,478 + AO353_13150 0.47 +1.7 2,914,478 + AO353_13150 0.47 -0.1 2,914,479 - AO353_13150 0.47 -0.7 2,914,479 - AO353_13150 0.47 +1.3 2,914,607 - AO353_13150 0.57 -0.1 2,914,670 + AO353_13150 0.62 -0.7 2,914,809 + AO353_13150 0.73 -1.2 2,914,809 + AO353_13150 0.73 +0.4 2,914,809 + AO353_13150 0.73 -0.3 2,914,809 + AO353_13150 0.73 +0.1 2,914,809 + AO353_13150 0.73 -0.1 2,914,809 + AO353_13150 0.73 -0.2 2,914,810 - AO353_13150 0.73 -2.0 2,914,810 - AO353_13150 0.73 -1.0 2,914,810 - AO353_13150 0.73 -1.6 2,914,811 + AO353_13150 0.73 -0.3 2,914,812 - AO353_13150 0.73 +0.2 2,914,812 - AO353_13150 0.73 -0.3 2,914,812 - AO353_13150 0.73 +1.6 2,915,160 + +0.9 2,915,160 + -1.8 2,915,204 + -0.1 2,915,204 + -0.6 2,915,204 + -0.7 2,915,204 + -0.8 2,915,204 + +1.2 2,915,292 - -1.6 2,915,312 + -1.3 2,915,502 + AO353_13155 0.21 +0.2 2,915,514 + AO353_13155 0.22 +0.2 2,915,562 + AO353_13155 0.26 -0.3 2,915,595 + AO353_13155 0.29 -0.4 2,915,595 + AO353_13155 0.29 +0.3 2,915,595 + AO353_13155 0.29 -1.6 2,915,596 - AO353_13155 0.29 +0.4 2,915,619 + AO353_13155 0.31 +0.5 2,915,650 - AO353_13155 0.34 -0.6 2,915,716 - AO353_13155 0.39 +2.2
Or see this region's nucleotide sequence