Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13115 and AO353_13120 are separated by 63 nucleotides AO353_13120 and AO353_13125 overlap by 13 nucleotides AO353_13125 and AO353_13130 are separated by 0 nucleotides
AO353_13115: AO353_13115 - epoxyqueuosine reductase, at 2,906,094 to 2,907,158
_13115
AO353_13120: AO353_13120 - carbohydrate kinase, at 2,907,222 to 2,908,721
_13120
AO353_13125: AO353_13125 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 2,908,709 to 2,909,179
_13125
AO353_13130: AO353_13130 - N-acetylmuramoyl-L-alanine amidase, at 2,909,180 to 2,910,616
_13130
Position (kb)
2907
2908
2909 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2906.246 kb on - strand, within AO353_13115 at 2906.489 kb on - strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.514 kb on + strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.515 kb on - strand, within AO353_13115 at 2906.518 kb on + strand, within AO353_13115 at 2906.518 kb on + strand, within AO353_13115 at 2906.518 kb on + strand, within AO353_13115 at 2906.518 kb on + strand, within AO353_13115 at 2906.519 kb on - strand, within AO353_13115 at 2906.519 kb on - strand, within AO353_13115 at 2906.519 kb on - strand, within AO353_13115 at 2906.519 kb on - strand, within AO353_13115 at 2906.519 kb on - strand, within AO353_13115 at 2906.519 kb on - strand, within AO353_13115 at 2906.519 kb on - strand, within AO353_13115 at 2906.519 kb on - strand, within AO353_13115 at 2906.644 kb on + strand, within AO353_13115 at 2906.644 kb on + strand, within AO353_13115 at 2906.644 kb on + strand, within AO353_13115 at 2906.644 kb on + strand, within AO353_13115 at 2906.644 kb on + strand, within AO353_13115 at 2906.644 kb on + strand, within AO353_13115 at 2906.645 kb on - strand, within AO353_13115 at 2906.645 kb on - strand, within AO353_13115 at 2906.645 kb on - strand, within AO353_13115 at 2906.645 kb on - strand, within AO353_13115 at 2906.645 kb on - strand, within AO353_13115 at 2906.645 kb on - strand, within AO353_13115 at 2906.645 kb on - strand, within AO353_13115 at 2906.667 kb on + strand, within AO353_13115 at 2906.667 kb on + strand, within AO353_13115 at 2906.845 kb on + strand, within AO353_13115 at 2906.857 kb on + strand, within AO353_13115 at 2906.857 kb on + strand, within AO353_13115 at 2906.857 kb on + strand, within AO353_13115 at 2906.857 kb on + strand, within AO353_13115 at 2906.857 kb on + strand, within AO353_13115 at 2906.857 kb on + strand, within AO353_13115 at 2906.857 kb on + strand, within AO353_13115 at 2906.857 kb on + strand, within AO353_13115 at 2906.858 kb on - strand, within AO353_13115 at 2906.858 kb on - strand, within AO353_13115 at 2906.858 kb on - strand, within AO353_13115 at 2906.858 kb on - strand, within AO353_13115 at 2906.858 kb on - strand, within AO353_13115 at 2906.858 kb on - strand, within AO353_13115 at 2906.858 kb on - strand, within AO353_13115 at 2906.911 kb on + strand, within AO353_13115 at 2906.911 kb on + strand, within AO353_13115 at 2906.911 kb on + strand, within AO353_13115 at 2906.995 kb on + strand, within AO353_13115 at 2906.995 kb on + strand, within AO353_13115 at 2906.995 kb on + strand, within AO353_13115 at 2906.995 kb on + strand, within AO353_13115 at 2906.995 kb on + strand, within AO353_13115 at 2906.996 kb on - strand, within AO353_13115 at 2906.996 kb on - strand, within AO353_13115 at 2906.996 kb on - strand, within AO353_13115 at 2907.131 kb on + strand at 2907.131 kb on + strand at 2907.132 kb on - strand at 2907.132 kb on - strand at 2907.146 kb on + strand at 2907.146 kb on + strand at 2907.146 kb on + strand at 2907.146 kb on + strand at 2907.147 kb on - strand at 2907.188 kb on + strand at 2907.188 kb on + strand at 2907.188 kb on + strand at 2907.188 kb on + strand at 2907.188 kb on + strand at 2907.188 kb on + strand at 2907.189 kb on - strand at 2907.189 kb on - strand at 2907.189 kb on - strand at 2907.189 kb on - strand at 2907.189 kb on - strand at 2907.190 kb on + strand at 2907.190 kb on + strand at 2907.190 kb on + strand at 2907.190 kb on + strand at 2907.190 kb on + strand at 2907.191 kb on - strand at 2907.191 kb on - strand at 2907.191 kb on - strand at 2907.191 kb on - strand at 2907.191 kb on - strand at 2907.191 kb on - strand at 2907.191 kb on - strand at 2907.191 kb on - strand at 2907.191 kb on - strand at 2907.191 kb on - strand at 2907.191 kb on - strand at 2907.245 kb on - strand at 2907.245 kb on - strand at 2907.245 kb on - strand at 2907.245 kb on - strand at 2907.258 kb on + strand at 2907.259 kb on - strand at 2907.432 kb on + strand, within AO353_13120 at 2907.528 kb on + strand, within AO353_13120 at 2907.528 kb on + strand, within AO353_13120 at 2907.528 kb on + strand, within AO353_13120 at 2907.648 kb on + strand, within AO353_13120 at 2907.648 kb on + strand, within AO353_13120 at 2907.648 kb on + strand, within AO353_13120 at 2907.648 kb on + strand, within AO353_13120 at 2907.648 kb on + strand, within AO353_13120 at 2907.648 kb on + strand, within AO353_13120 at 2907.648 kb on + strand, within AO353_13120 at 2907.648 kb on + strand, within AO353_13120 at 2907.648 kb on + strand, within AO353_13120 at 2907.649 kb on - strand, within AO353_13120 at 2907.777 kb on + strand, within AO353_13120 at 2907.777 kb on + strand, within AO353_13120 at 2907.777 kb on + strand, within AO353_13120 at 2907.777 kb on + strand, within AO353_13120 at 2907.777 kb on + strand, within AO353_13120 at 2907.777 kb on + strand, within AO353_13120 at 2907.777 kb on + strand, within AO353_13120 at 2908.081 kb on + strand, within AO353_13120 at 2908.081 kb on + strand, within AO353_13120 at 2908.081 kb on + strand, within AO353_13120 at 2908.081 kb on + strand, within AO353_13120 at 2908.082 kb on - strand, within AO353_13120 at 2908.082 kb on - strand, within AO353_13120 at 2908.082 kb on - strand, within AO353_13120 at 2908.352 kb on - strand, within AO353_13120 at 2908.419 kb on + strand, within AO353_13120 at 2908.419 kb on + strand, within AO353_13120 at 2908.637 kb on + strand at 2908.637 kb on + strand at 2908.638 kb on - strand at 2908.638 kb on - strand at 2908.719 kb on + strand at 2908.719 kb on + strand at 2908.719 kb on + strand at 2908.727 kb on + strand at 2909.177 kb on + strand at 2909.177 kb on + strand at 2909.194 kb on + strand at 2909.194 kb on + strand at 2909.194 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 2,906,246 - AO353_13115 0.14 +0.4 2,906,489 - AO353_13115 0.37 -1.3 2,906,514 + AO353_13115 0.39 -1.8 2,906,514 + AO353_13115 0.39 +2.0 2,906,514 + AO353_13115 0.39 +1.2 2,906,514 + AO353_13115 0.39 -0.7 2,906,514 + AO353_13115 0.39 -1.3 2,906,514 + AO353_13115 0.39 -0.2 2,906,514 + AO353_13115 0.39 +0.6 2,906,514 + AO353_13115 0.39 +0.5 2,906,514 + AO353_13115 0.39 +0.1 2,906,514 + AO353_13115 0.39 -0.5 2,906,514 + AO353_13115 0.39 +0.5 2,906,514 + AO353_13115 0.39 +1.0 2,906,514 + AO353_13115 0.39 -0.7 2,906,514 + AO353_13115 0.39 +1.2 2,906,514 + AO353_13115 0.39 -0.6 2,906,514 + AO353_13115 0.39 +0.5 2,906,515 - AO353_13115 0.40 -0.1 2,906,515 - AO353_13115 0.40 -1.8 2,906,515 - AO353_13115 0.40 -0.5 2,906,515 - AO353_13115 0.40 +0.3 2,906,515 - AO353_13115 0.40 +0.4 2,906,515 - AO353_13115 0.40 -0.1 2,906,515 - AO353_13115 0.40 -1.4 2,906,515 - AO353_13115 0.40 +2.3 2,906,515 - AO353_13115 0.40 +0.3 2,906,515 - AO353_13115 0.40 +0.5 2,906,515 - AO353_13115 0.40 +0.2 2,906,515 - AO353_13115 0.40 -1.5 2,906,515 - AO353_13115 0.40 +1.2 2,906,515 - AO353_13115 0.40 -0.4 2,906,515 - AO353_13115 0.40 -0.3 2,906,515 - AO353_13115 0.40 +1.0 2,906,515 - AO353_13115 0.40 +0.5 2,906,515 - +0.5 2,906,515 - AO353_13115 0.40 +0.0 2,906,515 - AO353_13115 0.40 +0.5 2,906,515 - AO353_13115 0.40 +0.0 2,906,515 - AO353_13115 0.40 +0.2 2,906,518 + AO353_13115 0.40 -1.0 2,906,518 + AO353_13115 0.40 -0.8 2,906,518 + AO353_13115 0.40 +0.1 2,906,518 + AO353_13115 0.40 -0.3 2,906,519 - AO353_13115 0.40 +0.7 2,906,519 - AO353_13115 0.40 +0.5 2,906,519 - AO353_13115 0.40 +0.7 2,906,519 - AO353_13115 0.40 +0.2 2,906,519 - AO353_13115 0.40 +0.6 2,906,519 - AO353_13115 0.40 -0.2 2,906,519 - AO353_13115 0.40 +1.3 2,906,519 - AO353_13115 0.40 -0.5 2,906,644 + AO353_13115 0.52 +0.0 2,906,644 + AO353_13115 0.52 +0.5 2,906,644 + AO353_13115 0.52 +0.3 2,906,644 + AO353_13115 0.52 -0.8 2,906,644 + AO353_13115 0.52 -0.1 2,906,644 + AO353_13115 0.52 +0.0 2,906,645 - AO353_13115 0.52 +0.2 2,906,645 - AO353_13115 0.52 -0.0 2,906,645 - AO353_13115 0.52 -1.1 2,906,645 - AO353_13115 0.52 +0.8 2,906,645 - AO353_13115 0.52 -0.6 2,906,645 - AO353_13115 0.52 -0.4 2,906,645 - AO353_13115 0.52 +0.5 2,906,667 + AO353_13115 0.54 +2.0 2,906,667 + AO353_13115 0.54 -0.5 2,906,845 + AO353_13115 0.71 +0.7 2,906,857 + AO353_13115 0.72 -0.3 2,906,857 + AO353_13115 0.72 +1.3 2,906,857 + AO353_13115 0.72 +0.0 2,906,857 + AO353_13115 0.72 -0.1 2,906,857 + AO353_13115 0.72 -0.6 2,906,857 + AO353_13115 0.72 +0.0 2,906,857 + AO353_13115 0.72 -1.4 2,906,857 + AO353_13115 0.72 -0.2 2,906,858 - AO353_13115 0.72 +0.6 2,906,858 - AO353_13115 0.72 -0.9 2,906,858 - AO353_13115 0.72 +1.6 2,906,858 - AO353_13115 0.72 +0.6 2,906,858 - AO353_13115 0.72 -2.2 2,906,858 - AO353_13115 0.72 -0.8 2,906,858 - AO353_13115 0.72 +0.0 2,906,911 + AO353_13115 0.77 +0.3 2,906,911 + AO353_13115 0.77 +0.5 2,906,911 + AO353_13115 0.77 +2.0 2,906,995 + AO353_13115 0.85 +0.6 2,906,995 + AO353_13115 0.85 +0.7 2,906,995 + AO353_13115 0.85 -0.2 2,906,995 + AO353_13115 0.85 -1.4 2,906,995 + AO353_13115 0.85 +1.0 2,906,996 - AO353_13115 0.85 -1.4 2,906,996 - AO353_13115 0.85 -1.2 2,906,996 - AO353_13115 0.85 -0.7 2,907,131 + +0.0 2,907,131 + -0.5 2,907,132 - -0.5 2,907,132 - -0.4 2,907,146 + -0.3 2,907,146 + -0.8 2,907,146 + +0.5 2,907,146 + +0.8 2,907,147 - -1.4 2,907,188 + +1.0 2,907,188 + -0.4 2,907,188 + -0.4 2,907,188 + +0.8 2,907,188 + +0.3 2,907,188 + -1.0 2,907,189 - -0.6 2,907,189 - -0.2 2,907,189 - +0.0 2,907,189 - -2.5 2,907,189 - +1.0 2,907,190 + -0.1 2,907,190 + +0.0 2,907,190 + +0.7 2,907,190 + +0.0 2,907,190 + +0.0 2,907,191 - -1.5 2,907,191 - -1.3 2,907,191 - -0.4 2,907,191 - -1.0 2,907,191 - -2.5 2,907,191 - +1.5 2,907,191 - +0.5 2,907,191 - -1.1 2,907,191 - -0.8 2,907,191 - +0.0 2,907,191 - -2.0 2,907,245 - -2.5 2,907,245 - -0.4 2,907,245 - -2.4 2,907,245 - -0.7 2,907,258 + +0.2 2,907,259 - -1.5 2,907,432 + AO353_13120 0.14 -1.9 2,907,528 + AO353_13120 0.20 -0.8 2,907,528 + AO353_13120 0.20 +0.4 2,907,528 + AO353_13120 0.20 -0.3 2,907,648 + AO353_13120 0.28 -0.3 2,907,648 + AO353_13120 0.28 +0.2 2,907,648 + AO353_13120 0.28 -0.4 2,907,648 + AO353_13120 0.28 +0.0 2,907,648 + AO353_13120 0.28 +0.0 2,907,648 + AO353_13120 0.28 -0.7 2,907,648 + AO353_13120 0.28 -0.2 2,907,648 + AO353_13120 0.28 -0.1 2,907,648 + AO353_13120 0.28 -1.7 2,907,649 - AO353_13120 0.28 -0.8 2,907,777 + AO353_13120 0.37 +1.5 2,907,777 + AO353_13120 0.37 -0.8 2,907,777 + AO353_13120 0.37 +0.6 2,907,777 + AO353_13120 0.37 -1.5 2,907,777 + AO353_13120 0.37 +0.8 2,907,777 + AO353_13120 0.37 +0.6 2,907,777 + AO353_13120 0.37 -0.3 2,908,081 + AO353_13120 0.57 +0.5 2,908,081 + AO353_13120 0.57 +0.8 2,908,081 + AO353_13120 0.57 +0.5 2,908,081 + AO353_13120 0.57 -0.7 2,908,082 - AO353_13120 0.57 -0.3 2,908,082 - AO353_13120 0.57 -3.7 2,908,082 - AO353_13120 0.57 -2.5 2,908,352 - AO353_13120 0.75 -1.7 2,908,419 + AO353_13120 0.80 +0.5 2,908,419 + AO353_13120 0.80 +0.6 2,908,637 + +0.7 2,908,637 + -1.4 2,908,638 - +1.0 2,908,638 - -1.3 2,908,719 + -2.2 2,908,719 + +0.1 2,908,719 + -0.8 2,908,727 + -1.7 2,909,177 + -0.3 2,909,177 + -2.3 2,909,194 + -0.5 2,909,194 + -0.7 2,909,194 + +0.8
Or see this region's nucleotide sequence