Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12885 and AO353_12890 overlap by 1 nucleotides AO353_12890 and AO353_12895 are separated by 103 nucleotides AO353_12895 and AO353_12900 overlap by 1 nucleotides
AO353_12885: AO353_12885 - glucosyltransferase I RfaG, at 2,852,973 to 2,854,094
_12885
AO353_12890: AO353_12890 - heptose kinase, at 2,854,094 to 2,854,900
_12890
AO353_12895: AO353_12895 - lipopolysaccharide kinase, at 2,855,004 to 2,855,756
_12895
AO353_12900: AO353_12900 - serine/threonine protein kinase, at 2,855,756 to 2,857,195
_12900
Position (kb)
2855
2856 Strain fitness (log2 ratio)
-1
0
1 at 2854.883 kb on + strand at 2855.169 kb on + strand, within AO353_12895 at 2855.169 kb on + strand, within AO353_12895 at 2855.169 kb on + strand, within AO353_12895 at 2855.190 kb on + strand, within AO353_12895 at 2855.190 kb on + strand, within AO353_12895 at 2855.190 kb on + strand, within AO353_12895 at 2855.190 kb on + strand, within AO353_12895 at 2855.190 kb on + strand, within AO353_12895 at 2855.190 kb on + strand, within AO353_12895 at 2855.296 kb on + strand, within AO353_12895 at 2855.317 kb on + strand, within AO353_12895 at 2855.317 kb on + strand, within AO353_12895 at 2855.318 kb on - strand, within AO353_12895 at 2855.493 kb on + strand, within AO353_12895 at 2855.618 kb on - strand, within AO353_12895 at 2855.618 kb on - strand, within AO353_12895 at 2855.670 kb on + strand, within AO353_12895 at 2855.670 kb on + strand, within AO353_12895 at 2855.670 kb on + strand, within AO353_12895 at 2855.670 kb on + strand, within AO353_12895 at 2855.671 kb on - strand, within AO353_12895
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 2,854,883 + -0.2 2,855,169 + AO353_12895 0.22 -1.7 2,855,169 + AO353_12895 0.22 +0.1 2,855,169 + AO353_12895 0.22 -1.1 2,855,190 + AO353_12895 0.25 +1.3 2,855,190 + AO353_12895 0.25 -0.8 2,855,190 + AO353_12895 0.25 -0.1 2,855,190 + AO353_12895 0.25 -0.4 2,855,190 + AO353_12895 0.25 +0.5 2,855,190 + AO353_12895 0.25 +0.5 2,855,296 + AO353_12895 0.39 -1.7 2,855,317 + AO353_12895 0.42 -1.7 2,855,317 + AO353_12895 0.42 +0.4 2,855,318 - AO353_12895 0.42 -0.5 2,855,493 + AO353_12895 0.65 +0.5 2,855,618 - AO353_12895 0.82 -1.5 2,855,618 - AO353_12895 0.82 -0.4 2,855,670 + AO353_12895 0.88 -0.5 2,855,670 + AO353_12895 0.88 -0.8 2,855,670 + AO353_12895 0.88 -1.2 2,855,670 + AO353_12895 0.88 -0.5 2,855,671 - AO353_12895 0.89 -1.4
Or see this region's nucleotide sequence