Experiment: Chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01510 and AO353_01515 are separated by 90 nucleotides AO353_01515 and AO353_01520 are separated by 95 nucleotides AO353_01520 and AO353_01525 are separated by 189 nucleotides
AO353_01510: AO353_01510 - transcriptional regulator, at 323,697 to 324,695
_01510
AO353_01515: AO353_01515 - hypothetical protein, at 324,786 to 325,412
_01515
AO353_01520: AO353_01520 - hypothetical protein, at 325,508 to 325,885
_01520
AO353_01525: AO353_01525 - amino acid transporter, at 326,075 to 326,839
_01525
Position (kb)
325
326 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 324.687 kb on + strand at 324.687 kb on + strand at 324.687 kb on + strand at 324.687 kb on + strand at 324.688 kb on - strand at 324.749 kb on + strand at 324.750 kb on - strand at 324.750 kb on - strand at 324.792 kb on + strand at 324.792 kb on + strand at 324.792 kb on + strand at 324.792 kb on + strand at 324.793 kb on - strand at 324.981 kb on - strand, within AO353_01515 at 324.990 kb on + strand, within AO353_01515 at 324.990 kb on + strand, within AO353_01515 at 324.991 kb on - strand, within AO353_01515 at 324.991 kb on - strand, within AO353_01515 at 324.991 kb on - strand, within AO353_01515 at 325.055 kb on + strand, within AO353_01515 at 325.055 kb on + strand, within AO353_01515 at 325.055 kb on + strand, within AO353_01515 at 325.055 kb on + strand, within AO353_01515 at 325.056 kb on - strand, within AO353_01515 at 325.056 kb on - strand, within AO353_01515 at 325.056 kb on - strand, within AO353_01515 at 325.056 kb on - strand, within AO353_01515 at 325.058 kb on + strand, within AO353_01515 at 325.058 kb on + strand, within AO353_01515 at 325.058 kb on + strand, within AO353_01515 at 325.059 kb on - strand, within AO353_01515 at 325.253 kb on + strand, within AO353_01515 at 325.253 kb on + strand, within AO353_01515 at 325.253 kb on + strand, within AO353_01515 at 325.254 kb on - strand, within AO353_01515 at 325.324 kb on + strand, within AO353_01515 at 325.324 kb on + strand, within AO353_01515 at 325.324 kb on + strand, within AO353_01515 at 325.324 kb on + strand, within AO353_01515 at 325.324 kb on + strand, within AO353_01515 at 325.324 kb on + strand, within AO353_01515 at 325.324 kb on + strand, within AO353_01515 at 325.324 kb on + strand, within AO353_01515 at 325.324 kb on + strand, within AO353_01515 at 325.325 kb on - strand, within AO353_01515 at 325.325 kb on - strand, within AO353_01515 at 325.325 kb on - strand, within AO353_01515 at 325.325 kb on - strand, within AO353_01515 at 325.325 kb on - strand, within AO353_01515 at 325.325 kb on - strand, within AO353_01515 at 325.325 kb on - strand, within AO353_01515 at 325.325 kb on - strand, within AO353_01515 at 325.325 kb on - strand, within AO353_01515 at 325.325 kb on - strand, within AO353_01515 at 325.343 kb on - strand, within AO353_01515 at 325.343 kb on - strand, within AO353_01515 at 325.490 kb on + strand at 325.490 kb on + strand at 325.491 kb on - strand at 325.491 kb on - strand at 325.491 kb on - strand at 325.491 kb on - strand at 325.491 kb on - strand at 325.491 kb on - strand at 325.621 kb on + strand, within AO353_01520 at 325.622 kb on - strand, within AO353_01520 at 325.622 kb on - strand, within AO353_01520 at 325.622 kb on - strand, within AO353_01520 at 325.776 kb on + strand, within AO353_01520 at 325.776 kb on + strand, within AO353_01520 at 325.776 kb on + strand, within AO353_01520 at 325.776 kb on + strand, within AO353_01520 at 325.776 kb on + strand, within AO353_01520 at 325.777 kb on - strand, within AO353_01520 at 325.777 kb on - strand, within AO353_01520 at 325.833 kb on + strand, within AO353_01520 at 325.876 kb on - strand at 325.883 kb on + strand at 325.883 kb on + strand at 325.883 kb on + strand at 325.883 kb on + strand at 325.884 kb on - strand at 325.889 kb on + strand at 325.890 kb on - strand at 325.890 kb on - strand at 325.890 kb on - strand at 325.890 kb on - strand at 325.890 kb on - strand at 325.890 kb on - strand at 325.974 kb on + strand at 325.975 kb on - strand at 326.013 kb on + strand at 326.013 kb on + strand at 326.013 kb on + strand at 326.014 kb on - strand at 326.058 kb on + strand at 326.059 kb on - strand at 326.076 kb on + strand at 326.076 kb on + strand at 326.076 kb on + strand at 326.077 kb on - strand at 326.077 kb on - strand at 326.077 kb on - strand at 326.077 kb on - strand at 326.159 kb on + strand, within AO353_01525 at 326.802 kb on + strand at 326.802 kb on + strand at 326.802 kb on + strand at 326.803 kb on - strand at 326.803 kb on - strand at 326.813 kb on + strand at 326.813 kb on + strand at 326.813 kb on + strand at 326.813 kb on + strand at 326.813 kb on + strand at 326.813 kb on + strand at 326.813 kb on + strand at 326.814 kb on - strand at 326.814 kb on - strand at 326.814 kb on - strand at 326.814 kb on - strand at 326.814 kb on - strand at 326.814 kb on - strand at 326.814 kb on - strand at 326.814 kb on - strand at 326.814 kb on - strand at 326.814 kb on - strand at 326.814 kb on - strand at 326.835 kb on + strand at 326.835 kb on + strand at 326.835 kb on + strand at 326.836 kb on - strand at 326.836 kb on - strand at 326.836 kb on - strand at 326.836 kb on - strand at 326.836 kb on - strand at 326.836 kb on - strand at 326.836 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.16 mM remove 324,687 + +0.5 324,687 + -0.8 324,687 + -2.0 324,687 + -0.0 324,688 - -0.6 324,749 + -2.5 324,750 - +0.7 324,750 - -1.5 324,792 + -0.5 324,792 + -0.1 324,792 + -0.8 324,792 + +0.0 324,793 - -2.5 324,981 - AO353_01515 0.31 +0.3 324,990 + AO353_01515 0.33 -0.1 324,990 + AO353_01515 0.33 -0.2 324,991 - AO353_01515 0.33 +0.7 324,991 - AO353_01515 0.33 -0.0 324,991 - AO353_01515 0.33 -0.5 325,055 + AO353_01515 0.43 -0.2 325,055 + AO353_01515 0.43 -1.5 325,055 + AO353_01515 0.43 +1.4 325,055 + AO353_01515 0.43 +1.0 325,056 - AO353_01515 0.43 -0.0 325,056 - AO353_01515 0.43 +0.2 325,056 - AO353_01515 0.43 +1.0 325,056 - AO353_01515 0.43 -0.2 325,058 + AO353_01515 0.43 +1.0 325,058 + AO353_01515 0.43 +0.5 325,058 + AO353_01515 0.43 -0.5 325,059 - AO353_01515 0.44 +0.1 325,253 + AO353_01515 0.74 +0.8 325,253 + AO353_01515 0.74 -1.8 325,253 + AO353_01515 0.74 +0.8 325,254 - AO353_01515 0.75 +1.0 325,324 + AO353_01515 0.86 -0.0 325,324 + AO353_01515 0.86 +1.3 325,324 + AO353_01515 0.86 +1.3 325,324 + AO353_01515 0.86 +1.0 325,324 + AO353_01515 0.86 -0.5 325,324 + AO353_01515 0.86 -0.6 325,324 + AO353_01515 0.86 +1.5 325,324 + AO353_01515 0.86 -0.0 325,324 + AO353_01515 0.86 -0.4 325,325 - AO353_01515 0.86 +1.3 325,325 - AO353_01515 0.86 -0.5 325,325 - AO353_01515 0.86 -0.0 325,325 - AO353_01515 0.86 +0.0 325,325 - AO353_01515 0.86 -0.1 325,325 - AO353_01515 0.86 -0.7 325,325 - AO353_01515 0.86 -1.2 325,325 - AO353_01515 0.86 +0.1 325,325 - AO353_01515 0.86 +0.2 325,325 - AO353_01515 0.86 +0.4 325,343 - AO353_01515 0.89 -2.0 325,343 - AO353_01515 0.89 +0.5 325,490 + -1.6 325,490 + -0.1 325,491 - -0.6 325,491 - +1.3 325,491 - -0.2 325,491 - -0.7 325,491 - +0.1 325,491 - -0.0 325,621 + AO353_01520 0.30 -2.0 325,622 - AO353_01520 0.30 -1.4 325,622 - AO353_01520 0.30 +0.2 325,622 - AO353_01520 0.30 -1.3 325,776 + AO353_01520 0.71 +0.5 325,776 + AO353_01520 0.71 -0.3 325,776 + AO353_01520 0.71 -0.5 325,776 + AO353_01520 0.71 -1.5 325,776 + AO353_01520 0.71 +1.5 325,777 - AO353_01520 0.71 -0.5 325,777 - AO353_01520 0.71 -0.2 325,833 + AO353_01520 0.86 -2.7 325,876 - -0.5 325,883 + -0.9 325,883 + +0.7 325,883 + -0.5 325,883 + -1.5 325,884 - -0.9 325,889 + +0.5 325,890 - -0.1 325,890 - +0.4 325,890 - +2.5 325,890 - -0.6 325,890 - +0.3 325,890 - -1.6 325,974 + +2.0 325,975 - -0.4 326,013 + +0.4 326,013 + -0.5 326,013 + -0.7 326,014 - +1.2 326,058 + -2.8 326,059 - -0.3 326,076 + +0.1 326,076 + +0.6 326,076 + +2.7 326,077 - -0.6 326,077 - -0.7 326,077 - +0.1 326,077 - +0.9 326,159 + AO353_01525 0.11 +0.6 326,802 + -0.2 326,802 + -2.0 326,802 + +0.4 326,803 - +0.0 326,803 - +1.3 326,813 + -0.1 326,813 + +0.4 326,813 + -0.4 326,813 + -0.6 326,813 + -0.8 326,813 + +0.0 326,813 + +0.2 326,814 - -1.0 326,814 - -0.8 326,814 - +1.7 326,814 - +1.8 326,814 - -0.0 326,814 - -0.5 326,814 - -0.0 326,814 - -1.5 326,814 - +0.3 326,814 - +0.0 326,814 - -1.6 326,835 + +0.3 326,835 + -0.3 326,835 + -0.6 326,836 - +1.5 326,836 - -2.0 326,836 - -1.5 326,836 - -1.3 326,836 - -0.2 326,836 - -0.5 326,836 - +0.1
Or see this region's nucleotide sequence