Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_01520

Experiment: Chlorite 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_01510 and AO353_01515 are separated by 90 nucleotidesAO353_01515 and AO353_01520 are separated by 95 nucleotidesAO353_01520 and AO353_01525 are separated by 189 nucleotides AO353_01510: AO353_01510 - transcriptional regulator, at 323,697 to 324,695 _01510 AO353_01515: AO353_01515 - hypothetical protein, at 324,786 to 325,412 _01515 AO353_01520: AO353_01520 - hypothetical protein, at 325,508 to 325,885 _01520 AO353_01525: AO353_01525 - amino acid transporter, at 326,075 to 326,839 _01525 Position (kb) 325 326Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 324.687 kb on + strandat 324.687 kb on + strandat 324.687 kb on + strandat 324.687 kb on + strandat 324.688 kb on - strandat 324.749 kb on + strandat 324.750 kb on - strandat 324.750 kb on - strandat 324.792 kb on + strandat 324.792 kb on + strandat 324.792 kb on + strandat 324.792 kb on + strandat 324.793 kb on - strandat 324.981 kb on - strand, within AO353_01515at 324.990 kb on + strand, within AO353_01515at 324.990 kb on + strand, within AO353_01515at 324.991 kb on - strand, within AO353_01515at 324.991 kb on - strand, within AO353_01515at 324.991 kb on - strand, within AO353_01515at 325.055 kb on + strand, within AO353_01515at 325.055 kb on + strand, within AO353_01515at 325.055 kb on + strand, within AO353_01515at 325.055 kb on + strand, within AO353_01515at 325.056 kb on - strand, within AO353_01515at 325.056 kb on - strand, within AO353_01515at 325.056 kb on - strand, within AO353_01515at 325.056 kb on - strand, within AO353_01515at 325.058 kb on + strand, within AO353_01515at 325.058 kb on + strand, within AO353_01515at 325.058 kb on + strand, within AO353_01515at 325.059 kb on - strand, within AO353_01515at 325.253 kb on + strand, within AO353_01515at 325.253 kb on + strand, within AO353_01515at 325.253 kb on + strand, within AO353_01515at 325.254 kb on - strand, within AO353_01515at 325.324 kb on + strand, within AO353_01515at 325.324 kb on + strand, within AO353_01515at 325.324 kb on + strand, within AO353_01515at 325.324 kb on + strand, within AO353_01515at 325.324 kb on + strand, within AO353_01515at 325.324 kb on + strand, within AO353_01515at 325.324 kb on + strand, within AO353_01515at 325.324 kb on + strand, within AO353_01515at 325.324 kb on + strand, within AO353_01515at 325.325 kb on - strand, within AO353_01515at 325.325 kb on - strand, within AO353_01515at 325.325 kb on - strand, within AO353_01515at 325.325 kb on - strand, within AO353_01515at 325.325 kb on - strand, within AO353_01515at 325.325 kb on - strand, within AO353_01515at 325.325 kb on - strand, within AO353_01515at 325.325 kb on - strand, within AO353_01515at 325.325 kb on - strand, within AO353_01515at 325.325 kb on - strand, within AO353_01515at 325.343 kb on - strand, within AO353_01515at 325.343 kb on - strand, within AO353_01515at 325.490 kb on + strandat 325.490 kb on + strandat 325.491 kb on - strandat 325.491 kb on - strandat 325.491 kb on - strandat 325.491 kb on - strandat 325.491 kb on - strandat 325.491 kb on - strandat 325.621 kb on + strand, within AO353_01520at 325.622 kb on - strand, within AO353_01520at 325.622 kb on - strand, within AO353_01520at 325.622 kb on - strand, within AO353_01520at 325.776 kb on + strand, within AO353_01520at 325.776 kb on + strand, within AO353_01520at 325.776 kb on + strand, within AO353_01520at 325.776 kb on + strand, within AO353_01520at 325.776 kb on + strand, within AO353_01520at 325.777 kb on - strand, within AO353_01520at 325.777 kb on - strand, within AO353_01520at 325.833 kb on + strand, within AO353_01520at 325.876 kb on - strandat 325.883 kb on + strandat 325.883 kb on + strandat 325.883 kb on + strandat 325.883 kb on + strandat 325.884 kb on - strandat 325.889 kb on + strandat 325.890 kb on - strandat 325.890 kb on - strandat 325.890 kb on - strandat 325.890 kb on - strandat 325.890 kb on - strandat 325.890 kb on - strandat 325.974 kb on + strandat 325.975 kb on - strandat 326.013 kb on + strandat 326.013 kb on + strandat 326.013 kb on + strandat 326.014 kb on - strandat 326.058 kb on + strandat 326.059 kb on - strandat 326.076 kb on + strandat 326.076 kb on + strandat 326.076 kb on + strandat 326.077 kb on - strandat 326.077 kb on - strandat 326.077 kb on - strandat 326.077 kb on - strandat 326.159 kb on + strand, within AO353_01525at 326.802 kb on + strandat 326.802 kb on + strandat 326.802 kb on + strandat 326.803 kb on - strandat 326.803 kb on - strandat 326.813 kb on + strandat 326.813 kb on + strandat 326.813 kb on + strandat 326.813 kb on + strandat 326.813 kb on + strandat 326.813 kb on + strandat 326.813 kb on + strandat 326.814 kb on - strandat 326.814 kb on - strandat 326.814 kb on - strandat 326.814 kb on - strandat 326.814 kb on - strandat 326.814 kb on - strandat 326.814 kb on - strandat 326.814 kb on - strandat 326.814 kb on - strandat 326.814 kb on - strandat 326.814 kb on - strandat 326.835 kb on + strandat 326.835 kb on + strandat 326.835 kb on + strandat 326.836 kb on - strandat 326.836 kb on - strandat 326.836 kb on - strandat 326.836 kb on - strandat 326.836 kb on - strandat 326.836 kb on - strandat 326.836 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Chlorite 0.16 mM
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324,687 + +0.5
324,687 + -0.8
324,687 + -2.0
324,687 + -0.0
324,688 - -0.6
324,749 + -2.5
324,750 - +0.7
324,750 - -1.5
324,792 + -0.5
324,792 + -0.1
324,792 + -0.8
324,792 + +0.0
324,793 - -2.5
324,981 - AO353_01515 0.31 +0.3
324,990 + AO353_01515 0.33 -0.1
324,990 + AO353_01515 0.33 -0.2
324,991 - AO353_01515 0.33 +0.7
324,991 - AO353_01515 0.33 -0.0
324,991 - AO353_01515 0.33 -0.5
325,055 + AO353_01515 0.43 -0.2
325,055 + AO353_01515 0.43 -1.5
325,055 + AO353_01515 0.43 +1.4
325,055 + AO353_01515 0.43 +1.0
325,056 - AO353_01515 0.43 -0.0
325,056 - AO353_01515 0.43 +0.2
325,056 - AO353_01515 0.43 +1.0
325,056 - AO353_01515 0.43 -0.2
325,058 + AO353_01515 0.43 +1.0
325,058 + AO353_01515 0.43 +0.5
325,058 + AO353_01515 0.43 -0.5
325,059 - AO353_01515 0.44 +0.1
325,253 + AO353_01515 0.74 +0.8
325,253 + AO353_01515 0.74 -1.8
325,253 + AO353_01515 0.74 +0.8
325,254 - AO353_01515 0.75 +1.0
325,324 + AO353_01515 0.86 -0.0
325,324 + AO353_01515 0.86 +1.3
325,324 + AO353_01515 0.86 +1.3
325,324 + AO353_01515 0.86 +1.0
325,324 + AO353_01515 0.86 -0.5
325,324 + AO353_01515 0.86 -0.6
325,324 + AO353_01515 0.86 +1.5
325,324 + AO353_01515 0.86 -0.0
325,324 + AO353_01515 0.86 -0.4
325,325 - AO353_01515 0.86 +1.3
325,325 - AO353_01515 0.86 -0.5
325,325 - AO353_01515 0.86 -0.0
325,325 - AO353_01515 0.86 +0.0
325,325 - AO353_01515 0.86 -0.1
325,325 - AO353_01515 0.86 -0.7
325,325 - AO353_01515 0.86 -1.2
325,325 - AO353_01515 0.86 +0.1
325,325 - AO353_01515 0.86 +0.2
325,325 - AO353_01515 0.86 +0.4
325,343 - AO353_01515 0.89 -2.0
325,343 - AO353_01515 0.89 +0.5
325,490 + -1.6
325,490 + -0.1
325,491 - -0.6
325,491 - +1.3
325,491 - -0.2
325,491 - -0.7
325,491 - +0.1
325,491 - -0.0
325,621 + AO353_01520 0.30 -2.0
325,622 - AO353_01520 0.30 -1.4
325,622 - AO353_01520 0.30 +0.2
325,622 - AO353_01520 0.30 -1.3
325,776 + AO353_01520 0.71 +0.5
325,776 + AO353_01520 0.71 -0.3
325,776 + AO353_01520 0.71 -0.5
325,776 + AO353_01520 0.71 -1.5
325,776 + AO353_01520 0.71 +1.5
325,777 - AO353_01520 0.71 -0.5
325,777 - AO353_01520 0.71 -0.2
325,833 + AO353_01520 0.86 -2.7
325,876 - -0.5
325,883 + -0.9
325,883 + +0.7
325,883 + -0.5
325,883 + -1.5
325,884 - -0.9
325,889 + +0.5
325,890 - -0.1
325,890 - +0.4
325,890 - +2.5
325,890 - -0.6
325,890 - +0.3
325,890 - -1.6
325,974 + +2.0
325,975 - -0.4
326,013 + +0.4
326,013 + -0.5
326,013 + -0.7
326,014 - +1.2
326,058 + -2.8
326,059 - -0.3
326,076 + +0.1
326,076 + +0.6
326,076 + +2.7
326,077 - -0.6
326,077 - -0.7
326,077 - +0.1
326,077 - +0.9
326,159 + AO353_01525 0.11 +0.6
326,802 + -0.2
326,802 + -2.0
326,802 + +0.4
326,803 - +0.0
326,803 - +1.3
326,813 + -0.1
326,813 + +0.4
326,813 + -0.4
326,813 + -0.6
326,813 + -0.8
326,813 + +0.0
326,813 + +0.2
326,814 - -1.0
326,814 - -0.8
326,814 - +1.7
326,814 - +1.8
326,814 - -0.0
326,814 - -0.5
326,814 - -0.0
326,814 - -1.5
326,814 - +0.3
326,814 - +0.0
326,814 - -1.6
326,835 + +0.3
326,835 + -0.3
326,835 + -0.6
326,836 - +1.5
326,836 - -2.0
326,836 - -1.5
326,836 - -1.3
326,836 - -0.2
326,836 - -0.5
326,836 - +0.1

Or see this region's nucleotide sequence