Experiment: Chloride 250 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20545 and ABZR86_RS20550 are separated by 21 nucleotides ABZR86_RS20550 and ABZR86_RS20555 are separated by 282 nucleotides ABZR86_RS20555 and ABZR86_RS20560 are separated by 122 nucleotides ABZR86_RS20560 and ABZR86_RS20565 are separated by 33 nucleotides
ABZR86_RS20545: ABZR86_RS20545 - aldo/keto reductase family oxidoreductase, at 56,326 to 57,216
_RS20545
ABZR86_RS20550: ABZR86_RS20550 - hypothetical protein, at 57,238 to 57,705
_RS20550
ABZR86_RS20555: ABZR86_RS20555 - isovaleryl-CoA dehydrogenase, at 57,988 to 59,145
_RS20555
ABZR86_RS20560: ABZR86_RS20560 - hypothetical protein, at 59,268 to 59,522
_RS20560
ABZR86_RS20565: ABZR86_RS20565 - S8 family serine peptidase, at 59,556 to 62,360
_RS20565
Position (kb) 57
58
59
60 Strain fitness (log2 ratio) -1
0
1 at 57.175 kb on + strand at 57.176 kb on - strand at 57.239 kb on + strand at 57.240 kb on - strand at 57.375 kb on - strand, within ABZR86_RS20550 at 57.375 kb on - strand, within ABZR86_RS20550 at 57.375 kb on - strand, within ABZR86_RS20550 at 57.375 kb on - strand, within ABZR86_RS20550 at 57.382 kb on - strand, within ABZR86_RS20550 at 57.382 kb on - strand, within ABZR86_RS20550 at 57.382 kb on - strand, within ABZR86_RS20550 at 57.807 kb on + strand at 57.807 kb on + strand at 57.807 kb on + strand at 57.808 kb on - strand at 57.833 kb on + strand at 57.833 kb on + strand at 57.833 kb on + strand at 57.834 kb on - strand at 57.834 kb on - strand at 57.854 kb on - strand at 57.854 kb on - strand at 57.866 kb on + strand at 57.866 kb on + strand at 57.867 kb on - strand at 58.165 kb on + strand, within ABZR86_RS20555 at 58.186 kb on + strand, within ABZR86_RS20555 at 58.186 kb on + strand, within ABZR86_RS20555 at 58.187 kb on - strand, within ABZR86_RS20555 at 58.187 kb on - strand, within ABZR86_RS20555 at 58.318 kb on + strand, within ABZR86_RS20555 at 58.318 kb on + strand, within ABZR86_RS20555 at 58.318 kb on + strand, within ABZR86_RS20555 at 58.319 kb on - strand, within ABZR86_RS20555 at 58.346 kb on - strand, within ABZR86_RS20555 at 58.346 kb on - strand, within ABZR86_RS20555 at 58.498 kb on + strand, within ABZR86_RS20555 at 58.499 kb on - strand, within ABZR86_RS20555 at 58.786 kb on + strand, within ABZR86_RS20555 at 58.787 kb on - strand, within ABZR86_RS20555 at 58.787 kb on - strand, within ABZR86_RS20555 at 58.861 kb on + strand, within ABZR86_RS20555 at 58.861 kb on + strand, within ABZR86_RS20555 at 58.861 kb on + strand, within ABZR86_RS20555 at 58.861 kb on + strand, within ABZR86_RS20555 at 58.862 kb on - strand, within ABZR86_RS20555 at 58.862 kb on - strand, within ABZR86_RS20555 at 58.862 kb on - strand, within ABZR86_RS20555 at 58.862 kb on - strand, within ABZR86_RS20555 at 58.862 kb on - strand, within ABZR86_RS20555 at 58.862 kb on - strand, within ABZR86_RS20555 at 58.862 kb on - strand, within ABZR86_RS20555 at 58.895 kb on - strand, within ABZR86_RS20555 at 58.895 kb on - strand, within ABZR86_RS20555 at 59.023 kb on + strand, within ABZR86_RS20555 at 59.024 kb on - strand, within ABZR86_RS20555 at 59.024 kb on - strand, within ABZR86_RS20555 at 59.024 kb on - strand, within ABZR86_RS20555 at 59.129 kb on - strand at 59.129 kb on - strand at 59.488 kb on - strand, within ABZR86_RS20560 at 59.488 kb on - strand, within ABZR86_RS20560 at 59.488 kb on - strand, within ABZR86_RS20560 at 59.496 kb on + strand, within ABZR86_RS20560 at 59.497 kb on - strand at 59.614 kb on + strand at 59.614 kb on + strand at 59.615 kb on - strand at 59.615 kb on - strand at 59.615 kb on - strand at 59.615 kb on - strand at 59.623 kb on + strand at 59.624 kb on - strand at 59.624 kb on - strand at 59.690 kb on - strand at 59.690 kb on - strand at 59.953 kb on + strand, within ABZR86_RS20565 at 59.953 kb on + strand, within ABZR86_RS20565 at 59.953 kb on + strand, within ABZR86_RS20565 at 59.953 kb on + strand, within ABZR86_RS20565 at 59.954 kb on - strand, within ABZR86_RS20565 at 59.954 kb on - strand, within ABZR86_RS20565 at 59.954 kb on - strand, within ABZR86_RS20565 at 59.954 kb on - strand, within ABZR86_RS20565 at 59.968 kb on + strand, within ABZR86_RS20565 at 59.969 kb on - strand, within ABZR86_RS20565 at 59.969 kb on - strand, within ABZR86_RS20565 at 60.020 kb on - strand, within ABZR86_RS20565 at 60.020 kb on - strand, within ABZR86_RS20565 at 60.136 kb on + strand, within ABZR86_RS20565 at 60.137 kb on - strand, within ABZR86_RS20565
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 250 mM remove 57,175 + -0.1 57,176 - +0.5 57,239 + +0.6 57,240 - +0.4 57,375 - ABZR86_RS20550 0.29 +0.0 57,375 - ABZR86_RS20550 0.29 +0.3 57,375 - ABZR86_RS20550 0.29 +0.0 57,375 - ABZR86_RS20550 0.29 -0.6 57,382 - ABZR86_RS20550 0.31 -0.1 57,382 - ABZR86_RS20550 0.31 -0.6 57,382 - ABZR86_RS20550 0.31 -0.4 57,807 + +0.4 57,807 + -0.0 57,807 + +0.5 57,808 - -0.7 57,833 + +0.2 57,833 + -0.1 57,833 + -0.2 57,834 - -0.8 57,834 - +0.2 57,854 - +0.3 57,854 - +0.7 57,866 + -0.5 57,866 + +0.0 57,867 - -0.3 58,165 + ABZR86_RS20555 0.15 +0.4 58,186 + ABZR86_RS20555 0.17 +0.5 58,186 + ABZR86_RS20555 0.17 -0.2 58,187 - ABZR86_RS20555 0.17 -0.3 58,187 - ABZR86_RS20555 0.17 +0.2 58,318 + ABZR86_RS20555 0.28 +0.1 58,318 + ABZR86_RS20555 0.28 -0.7 58,318 + ABZR86_RS20555 0.28 -0.2 58,319 - ABZR86_RS20555 0.29 +0.0 58,346 - ABZR86_RS20555 0.31 -0.9 58,346 - ABZR86_RS20555 0.31 +1.6 58,498 + ABZR86_RS20555 0.44 -0.5 58,499 - ABZR86_RS20555 0.44 -1.1 58,786 + ABZR86_RS20555 0.69 -0.2 58,787 - ABZR86_RS20555 0.69 +0.6 58,787 - ABZR86_RS20555 0.69 +0.2 58,861 + ABZR86_RS20555 0.75 +0.1 58,861 + ABZR86_RS20555 0.75 -0.6 58,861 + ABZR86_RS20555 0.75 -0.9 58,861 + ABZR86_RS20555 0.75 +0.5 58,862 - ABZR86_RS20555 0.75 -0.9 58,862 - ABZR86_RS20555 0.75 -0.1 58,862 - ABZR86_RS20555 0.75 -0.5 58,862 - ABZR86_RS20555 0.75 -0.9 58,862 - ABZR86_RS20555 0.75 -0.5 58,862 - ABZR86_RS20555 0.75 -0.3 58,862 - ABZR86_RS20555 0.75 -1.0 58,895 - ABZR86_RS20555 0.78 -0.6 58,895 - ABZR86_RS20555 0.78 -0.1 59,023 + ABZR86_RS20555 0.89 +0.9 59,024 - ABZR86_RS20555 0.89 -0.0 59,024 - ABZR86_RS20555 0.89 +0.4 59,024 - ABZR86_RS20555 0.89 +0.4 59,129 - -0.8 59,129 - +0.2 59,488 - ABZR86_RS20560 0.86 +0.0 59,488 - ABZR86_RS20560 0.86 -0.8 59,488 - ABZR86_RS20560 0.86 -0.6 59,496 + ABZR86_RS20560 0.89 -0.9 59,497 - -0.4 59,614 + +0.0 59,614 + +0.1 59,615 - -0.3 59,615 - -0.2 59,615 - +0.3 59,615 - -0.4 59,623 + +0.4 59,624 - -0.1 59,624 - +0.3 59,690 - +0.5 59,690 - +0.3 59,953 + ABZR86_RS20565 0.14 +0.4 59,953 + ABZR86_RS20565 0.14 +0.3 59,953 + ABZR86_RS20565 0.14 +0.9 59,953 + ABZR86_RS20565 0.14 -0.3 59,954 - ABZR86_RS20565 0.14 -0.1 59,954 - ABZR86_RS20565 0.14 +0.1 59,954 - ABZR86_RS20565 0.14 +0.3 59,954 - ABZR86_RS20565 0.14 +0.1 59,968 + ABZR86_RS20565 0.15 +0.5 59,969 - ABZR86_RS20565 0.15 -0.7 59,969 - ABZR86_RS20565 0.15 -0.6 60,020 - ABZR86_RS20565 0.17 +0.2 60,020 - ABZR86_RS20565 0.17 +0.3 60,136 + ABZR86_RS20565 0.21 +0.6 60,137 - ABZR86_RS20565 0.21 -0.6
Or see this region's nucleotide sequence