Experiment: Chloride 250 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10515 and ABZR86_RS10520 are separated by 116 nucleotides ABZR86_RS10520 and ABZR86_RS10525 are separated by 273 nucleotides ABZR86_RS10525 and ABZR86_RS10530 are separated by 316 nucleotides
ABZR86_RS10515: ABZR86_RS10515 - phosphatidylcholine/phosphatidylserine synthase, at 2,337,297 to 2,338,070
_RS10515
ABZR86_RS10520: ABZR86_RS10520 - DUF4124 domain-containing protein, at 2,338,187 to 2,338,639
_RS10520
ABZR86_RS10525: ABZR86_RS10525 - proline--tRNA ligase, at 2,338,913 to 2,340,610
_RS10525
ABZR86_RS10530: ABZR86_RS10530 - H-NS histone family protein, at 2,340,927 to 2,341,256
_RS10530
Position (kb)
2338
2339
2340
2341 Strain fitness (log2 ratio)
-1
0
1 at 2338.101 kb on + strand at 2338.101 kb on + strand at 2338.121 kb on - strand at 2338.121 kb on - strand at 2338.135 kb on + strand at 2338.135 kb on + strand at 2338.136 kb on - strand at 2338.136 kb on - strand at 2338.136 kb on - strand at 2338.136 kb on - strand at 2338.167 kb on + strand at 2338.167 kb on + strand at 2338.167 kb on + strand at 2338.167 kb on + strand at 2338.168 kb on - strand at 2338.168 kb on - strand at 2338.168 kb on - strand at 2338.266 kb on - strand, within ABZR86_RS10520 at 2338.298 kb on + strand, within ABZR86_RS10520 at 2338.613 kb on + strand at 2338.613 kb on + strand at 2338.613 kb on + strand at 2338.613 kb on + strand at 2338.613 kb on + strand at 2338.614 kb on - strand at 2338.622 kb on + strand at 2338.623 kb on - strand at 2338.623 kb on - strand at 2338.637 kb on + strand at 2338.638 kb on - strand at 2338.638 kb on - strand at 2338.691 kb on + strand at 2338.841 kb on - strand at 2338.876 kb on - strand at 2338.876 kb on - strand at 2338.876 kb on - strand at 2338.877 kb on + strand at 2340.707 kb on - strand at 2340.724 kb on - strand at 2340.733 kb on + strand at 2340.749 kb on + strand at 2340.867 kb on - strand at 2340.882 kb on + strand at 2340.893 kb on - strand at 2340.893 kb on - strand at 2340.902 kb on - strand at 2340.902 kb on - strand at 2340.922 kb on + strand at 2340.923 kb on - strand at 2340.957 kb on - strand at 2341.085 kb on - strand, within ABZR86_RS10530 at 2341.340 kb on + strand at 2341.609 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 250 mM remove 2,338,101 + -0.2 2,338,101 + +0.1 2,338,121 - -0.4 2,338,121 - +0.4 2,338,135 + +0.3 2,338,135 + +0.6 2,338,136 - +0.5 2,338,136 - +0.2 2,338,136 - -0.1 2,338,136 - +0.0 2,338,167 + +0.5 2,338,167 + +0.1 2,338,167 + +0.4 2,338,167 + +0.3 2,338,168 - -0.1 2,338,168 - +0.2 2,338,168 - +0.6 2,338,266 - ABZR86_RS10520 0.17 +0.7 2,338,298 + ABZR86_RS10520 0.25 +0.2 2,338,613 + -0.6 2,338,613 + +1.0 2,338,613 + -0.9 2,338,613 + +0.2 2,338,613 + +0.4 2,338,614 - -0.5 2,338,622 + -0.4 2,338,623 - -0.1 2,338,623 - -0.1 2,338,637 + -0.5 2,338,638 - +0.1 2,338,638 - +0.1 2,338,691 + +0.5 2,338,841 - +0.5 2,338,876 - +0.2 2,338,876 - +0.1 2,338,876 - +0.6 2,338,877 + -0.6 2,340,707 - -0.3 2,340,724 - -0.3 2,340,733 + +0.3 2,340,749 + +0.0 2,340,867 - +0.5 2,340,882 + +0.2 2,340,893 - -0.8 2,340,893 - -1.1 2,340,902 - -0.4 2,340,902 - -0.6 2,340,922 + -0.2 2,340,923 - -0.8 2,340,957 - -0.6 2,341,085 - ABZR86_RS10530 0.48 -0.8 2,341,340 + +0.2 2,341,609 + -0.1
Or see this region's nucleotide sequence