Experiment: Chloride 250 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS01095 and ABZR86_RS01100 are separated by 486 nucleotides ABZR86_RS01100 and ABZR86_RS01105 overlap by 1 nucleotides ABZR86_RS01105 and ABZR86_RS01110 are separated by 201 nucleotides
ABZR86_RS01095: ABZR86_RS01095 - elongation factor G, at 217,162 to 219,327
_RS01095
ABZR86_RS01100: ABZR86_RS01100 - catalase family peroxidase, at 219,814 to 220,902
_RS01100
ABZR86_RS01105: ABZR86_RS01105 - cytochrome b/b6 domain-containing protein, at 220,902 to 221,447
_RS01105
ABZR86_RS01110: ABZR86_RS01110 - hypothetical protein, at 221,649 to 222,344
_RS01110
Position (kb) 219
220
221 Strain fitness (log2 ratio) -1
0
1 at 218.855 kb on - strand, within ABZR86_RS01095 at 218.855 kb on - strand, within ABZR86_RS01095 at 218.914 kb on + strand, within ABZR86_RS01095 at 218.956 kb on + strand, within ABZR86_RS01095 at 218.956 kb on + strand, within ABZR86_RS01095 at 218.957 kb on - strand, within ABZR86_RS01095 at 218.957 kb on - strand, within ABZR86_RS01095 at 219.088 kb on + strand, within ABZR86_RS01095 at 219.088 kb on + strand, within ABZR86_RS01095 at 219.205 kb on + strand at 219.205 kb on + strand at 219.206 kb on - strand at 219.268 kb on + strand at 219.269 kb on - strand at 219.269 kb on - strand at 219.325 kb on + strand at 219.325 kb on + strand at 219.326 kb on - strand at 219.326 kb on - strand at 219.326 kb on - strand at 219.326 kb on - strand at 219.326 kb on - strand at 219.326 kb on - strand at 219.448 kb on + strand at 219.448 kb on + strand at 219.448 kb on + strand at 219.449 kb on - strand at 219.499 kb on + strand at 219.499 kb on + strand at 219.499 kb on + strand at 219.500 kb on - strand at 219.500 kb on - strand at 219.500 kb on - strand at 219.500 kb on - strand at 219.500 kb on - strand at 219.500 kb on - strand at 219.503 kb on + strand at 219.503 kb on + strand at 219.554 kb on - strand at 219.662 kb on + strand at 219.662 kb on + strand at 219.662 kb on + strand at 219.662 kb on + strand at 219.663 kb on - strand at 219.663 kb on - strand at 219.663 kb on - strand at 219.746 kb on - strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.752 kb on + strand at 219.753 kb on - strand at 219.753 kb on - strand at 219.753 kb on - strand at 219.753 kb on - strand at 219.878 kb on - strand at 219.925 kb on + strand, within ABZR86_RS01100 at 219.925 kb on + strand, within ABZR86_RS01100 at 219.926 kb on - strand, within ABZR86_RS01100 at 219.926 kb on - strand, within ABZR86_RS01100 at 220.159 kb on + strand, within ABZR86_RS01100 at 220.160 kb on - strand, within ABZR86_RS01100 at 220.160 kb on - strand, within ABZR86_RS01100 at 220.160 kb on - strand, within ABZR86_RS01100 at 220.160 kb on - strand, within ABZR86_RS01100 at 220.206 kb on + strand, within ABZR86_RS01100 at 220.438 kb on + strand, within ABZR86_RS01100 at 220.438 kb on + strand, within ABZR86_RS01100 at 220.438 kb on + strand, within ABZR86_RS01100 at 220.438 kb on + strand, within ABZR86_RS01100 at 220.438 kb on + strand, within ABZR86_RS01100 at 220.438 kb on + strand, within ABZR86_RS01100 at 220.438 kb on + strand, within ABZR86_RS01100 at 220.438 kb on + strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.439 kb on - strand, within ABZR86_RS01100 at 220.548 kb on + strand, within ABZR86_RS01100 at 220.548 kb on + strand, within ABZR86_RS01100 at 220.548 kb on + strand, within ABZR86_RS01100 at 220.549 kb on - strand, within ABZR86_RS01100 at 220.549 kb on - strand, within ABZR86_RS01100 at 220.549 kb on - strand, within ABZR86_RS01100 at 220.552 kb on + strand, within ABZR86_RS01100 at 220.552 kb on + strand, within ABZR86_RS01100 at 220.552 kb on + strand, within ABZR86_RS01100 at 220.552 kb on + strand, within ABZR86_RS01100 at 220.552 kb on + strand, within ABZR86_RS01100 at 220.553 kb on - strand, within ABZR86_RS01100 at 220.553 kb on - strand, within ABZR86_RS01100 at 220.553 kb on - strand, within ABZR86_RS01100 at 220.553 kb on - strand, within ABZR86_RS01100 at 220.553 kb on - strand, within ABZR86_RS01100 at 220.553 kb on - strand, within ABZR86_RS01100 at 220.553 kb on - strand, within ABZR86_RS01100 at 220.553 kb on - strand, within ABZR86_RS01100 at 220.553 kb on - strand, within ABZR86_RS01100 at 220.750 kb on + strand, within ABZR86_RS01100 at 220.751 kb on - strand, within ABZR86_RS01100 at 220.751 kb on - strand, within ABZR86_RS01100 at 220.751 kb on - strand, within ABZR86_RS01100 at 220.763 kb on + strand, within ABZR86_RS01100 at 220.764 kb on - strand, within ABZR86_RS01100 at 220.822 kb on + strand at 220.822 kb on + strand at 220.834 kb on + strand at 220.834 kb on + strand at 220.835 kb on - strand at 220.919 kb on + strand at 220.919 kb on + strand at 220.919 kb on + strand at 220.919 kb on + strand at 220.919 kb on + strand at 220.920 kb on - strand at 220.920 kb on - strand at 220.927 kb on + strand at 220.927 kb on + strand at 220.928 kb on - strand at 221.181 kb on + strand, within ABZR86_RS01105 at 221.181 kb on + strand, within ABZR86_RS01105 at 221.181 kb on + strand, within ABZR86_RS01105 at 221.181 kb on + strand, within ABZR86_RS01105 at 221.181 kb on + strand, within ABZR86_RS01105 at 221.181 kb on + strand, within ABZR86_RS01105 at 221.182 kb on - strand, within ABZR86_RS01105 at 221.182 kb on - strand, within ABZR86_RS01105 at 221.182 kb on - strand, within ABZR86_RS01105 at 221.492 kb on - strand at 221.492 kb on - strand at 221.620 kb on - strand at 221.799 kb on + strand, within ABZR86_RS01110 at 221.799 kb on + strand, within ABZR86_RS01110 at 221.800 kb on - strand, within ABZR86_RS01110 at 221.800 kb on - strand, within ABZR86_RS01110
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 250 mM remove 218,855 - ABZR86_RS01095 0.78 +0.2 218,855 - ABZR86_RS01095 0.78 -0.2 218,914 + ABZR86_RS01095 0.81 +0.2 218,956 + ABZR86_RS01095 0.83 -0.3 218,956 + ABZR86_RS01095 0.83 -1.4 218,957 - ABZR86_RS01095 0.83 -1.5 218,957 - ABZR86_RS01095 0.83 -0.1 219,088 + ABZR86_RS01095 0.89 +0.5 219,088 + ABZR86_RS01095 0.89 -1.1 219,205 + +0.2 219,205 + +0.6 219,206 - +0.6 219,268 + +0.3 219,269 - -0.2 219,269 - -0.2 219,325 + -0.5 219,325 + -0.0 219,326 - -0.9 219,326 - +0.5 219,326 - +0.7 219,326 - +0.1 219,326 - +0.3 219,326 - +0.5 219,448 + -1.0 219,448 + -0.3 219,448 + -0.5 219,449 - -0.3 219,499 + -0.9 219,499 + +0.5 219,499 + -0.4 219,500 - +0.0 219,500 - -0.4 219,500 - -0.5 219,500 - +0.5 219,500 - +0.1 219,500 - -0.0 219,503 + +0.1 219,503 + +0.3 219,554 - -0.8 219,662 + +0.0 219,662 + +0.9 219,662 + -0.1 219,662 + -0.6 219,663 - +0.9 219,663 - -0.2 219,663 - +0.5 219,746 - +1.3 219,752 + +0.0 219,752 + +0.3 219,752 + -0.4 219,752 + -0.3 219,752 + -0.5 219,752 + +0.4 219,752 + -0.1 219,752 + +0.3 219,752 + +0.0 219,752 + -0.1 219,753 - -0.0 219,753 - -0.2 219,753 - +0.1 219,753 - +0.3 219,878 - +0.1 219,925 + ABZR86_RS01100 0.10 +0.4 219,925 + ABZR86_RS01100 0.10 -0.3 219,926 - ABZR86_RS01100 0.10 -0.2 219,926 - ABZR86_RS01100 0.10 +0.5 220,159 + ABZR86_RS01100 0.32 +0.5 220,160 - ABZR86_RS01100 0.32 -0.4 220,160 - ABZR86_RS01100 0.32 +0.2 220,160 - ABZR86_RS01100 0.32 -1.0 220,160 - ABZR86_RS01100 0.32 +0.7 220,206 + ABZR86_RS01100 0.36 -0.4 220,438 + ABZR86_RS01100 0.57 -1.2 220,438 + ABZR86_RS01100 0.57 +0.2 220,438 + ABZR86_RS01100 0.57 +0.3 220,438 + ABZR86_RS01100 0.57 -0.2 220,438 + ABZR86_RS01100 0.57 +0.3 220,438 + ABZR86_RS01100 0.57 +0.3 220,438 + ABZR86_RS01100 0.57 +0.2 220,438 + ABZR86_RS01100 0.57 +0.4 220,439 - ABZR86_RS01100 0.57 -0.1 220,439 - ABZR86_RS01100 0.57 -1.1 220,439 - ABZR86_RS01100 0.57 +0.6 220,439 - ABZR86_RS01100 0.57 +0.2 220,439 - ABZR86_RS01100 0.57 +0.5 220,439 - ABZR86_RS01100 0.57 +0.5 220,439 - ABZR86_RS01100 0.57 +1.5 220,439 - ABZR86_RS01100 0.57 +0.0 220,439 - ABZR86_RS01100 0.57 -0.3 220,439 - ABZR86_RS01100 0.57 -0.1 220,439 - ABZR86_RS01100 0.57 +0.2 220,548 + ABZR86_RS01100 0.67 -0.1 220,548 + ABZR86_RS01100 0.67 -0.6 220,548 + ABZR86_RS01100 0.67 +0.4 220,549 - ABZR86_RS01100 0.67 -0.1 220,549 - ABZR86_RS01100 0.67 -0.1 220,549 - ABZR86_RS01100 0.67 -0.4 220,552 + ABZR86_RS01100 0.68 -0.1 220,552 + ABZR86_RS01100 0.68 -0.1 220,552 + ABZR86_RS01100 0.68 +0.2 220,552 + ABZR86_RS01100 0.68 +0.1 220,552 + ABZR86_RS01100 0.68 +0.1 220,553 - ABZR86_RS01100 0.68 -0.8 220,553 - ABZR86_RS01100 0.68 -0.3 220,553 - ABZR86_RS01100 0.68 +0.8 220,553 - ABZR86_RS01100 0.68 +0.2 220,553 - ABZR86_RS01100 0.68 +0.4 220,553 - ABZR86_RS01100 0.68 +0.2 220,553 - ABZR86_RS01100 0.68 -0.3 220,553 - ABZR86_RS01100 0.68 -0.0 220,553 - ABZR86_RS01100 0.68 +0.5 220,750 + ABZR86_RS01100 0.86 +0.2 220,751 - ABZR86_RS01100 0.86 +1.1 220,751 - ABZR86_RS01100 0.86 +0.1 220,751 - ABZR86_RS01100 0.86 -0.2 220,763 + ABZR86_RS01100 0.87 -0.0 220,764 - ABZR86_RS01100 0.87 +0.5 220,822 + +0.1 220,822 + -0.0 220,834 + -0.1 220,834 + +0.1 220,835 - -0.0 220,919 + +1.0 220,919 + -0.2 220,919 + -0.2 220,919 + +0.5 220,919 + +0.7 220,920 - +0.2 220,920 - +0.5 220,927 + +0.2 220,927 + +0.5 220,928 - -0.6 221,181 + ABZR86_RS01105 0.51 -0.2 221,181 + ABZR86_RS01105 0.51 -1.1 221,181 + ABZR86_RS01105 0.51 -0.1 221,181 + ABZR86_RS01105 0.51 -1.2 221,181 + ABZR86_RS01105 0.51 -0.1 221,181 + ABZR86_RS01105 0.51 +0.1 221,182 - ABZR86_RS01105 0.51 -0.2 221,182 - ABZR86_RS01105 0.51 -0.6 221,182 - ABZR86_RS01105 0.51 -1.2 221,492 - +0.0 221,492 - -0.2 221,620 - +0.2 221,799 + ABZR86_RS01110 0.22 +0.6 221,799 + ABZR86_RS01110 0.22 +0.1 221,800 - ABZR86_RS01110 0.22 -0.5 221,800 - ABZR86_RS01110 0.22 -0.3
Or see this region's nucleotide sequence