Experiment: Chloride 250 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00050 and ABZR86_RS00055 are separated by 84 nucleotides ABZR86_RS00055 and ABZR86_RS00060 overlap by 4 nucleotides
ABZR86_RS00050: ABZR86_RS00050 - AraC family transcriptional regulator, at 10,400 to 11,257
_RS00050
ABZR86_RS00055: ABZR86_RS00055 - M50 family metallopeptidase, at 11,342 to 12,484
_RS00055
ABZR86_RS00060: ABZR86_RS00060 - hypothetical protein, at 12,481 to 13,551
_RS00060
Position (kb)
11
12
13 Strain fitness (log2 ratio)
-1
0
1
2 at 10.364 kb on - strand at 10.394 kb on - strand at 10.394 kb on - strand at 10.607 kb on + strand, within ABZR86_RS00050 at 11.126 kb on - strand, within ABZR86_RS00050 at 11.131 kb on + strand, within ABZR86_RS00050 at 11.131 kb on + strand, within ABZR86_RS00050 at 11.131 kb on + strand, within ABZR86_RS00050 at 11.132 kb on - strand, within ABZR86_RS00050 at 11.132 kb on - strand, within ABZR86_RS00050 at 11.472 kb on + strand, within ABZR86_RS00055 at 11.472 kb on + strand, within ABZR86_RS00055 at 11.495 kb on + strand, within ABZR86_RS00055 at 11.657 kb on + strand, within ABZR86_RS00055 at 11.657 kb on + strand, within ABZR86_RS00055 at 11.669 kb on + strand, within ABZR86_RS00055 at 11.670 kb on - strand, within ABZR86_RS00055 at 11.921 kb on + strand, within ABZR86_RS00055 at 11.921 kb on + strand, within ABZR86_RS00055 at 11.922 kb on - strand, within ABZR86_RS00055 at 11.922 kb on - strand, within ABZR86_RS00055 at 11.925 kb on + strand, within ABZR86_RS00055 at 11.925 kb on + strand, within ABZR86_RS00055 at 11.926 kb on - strand, within ABZR86_RS00055 at 11.926 kb on - strand, within ABZR86_RS00055 at 11.926 kb on - strand, within ABZR86_RS00055 at 12.051 kb on - strand, within ABZR86_RS00055 at 12.269 kb on + strand, within ABZR86_RS00055 at 12.269 kb on + strand, within ABZR86_RS00055 at 12.270 kb on - strand, within ABZR86_RS00055 at 12.270 kb on - strand, within ABZR86_RS00055 at 12.270 kb on - strand, within ABZR86_RS00055 at 12.270 kb on - strand, within ABZR86_RS00055 at 12.270 kb on - strand, within ABZR86_RS00055 at 12.447 kb on + strand at 12.448 kb on - strand at 12.448 kb on - strand at 12.647 kb on - strand, within ABZR86_RS00060 at 13.148 kb on + strand, within ABZR86_RS00060 at 13.148 kb on + strand, within ABZR86_RS00060 at 13.148 kb on + strand, within ABZR86_RS00060 at 13.148 kb on + strand, within ABZR86_RS00060
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 250 mM remove 10,364 - -0.1 10,394 - -0.1 10,394 - -0.2 10,607 + ABZR86_RS00050 0.24 -0.1 11,126 - ABZR86_RS00050 0.85 -0.6 11,131 + ABZR86_RS00050 0.85 -0.4 11,131 + ABZR86_RS00050 0.85 +0.3 11,131 + ABZR86_RS00050 0.85 -1.1 11,132 - ABZR86_RS00050 0.85 -0.5 11,132 - ABZR86_RS00050 0.85 +0.1 11,472 + ABZR86_RS00055 0.11 +0.2 11,472 + ABZR86_RS00055 0.11 +1.0 11,495 + ABZR86_RS00055 0.13 +0.1 11,657 + ABZR86_RS00055 0.28 -0.6 11,657 + ABZR86_RS00055 0.28 +0.1 11,669 + ABZR86_RS00055 0.29 -0.3 11,670 - ABZR86_RS00055 0.29 +0.9 11,921 + ABZR86_RS00055 0.51 -0.3 11,921 + ABZR86_RS00055 0.51 +0.9 11,922 - ABZR86_RS00055 0.51 +0.6 11,922 - ABZR86_RS00055 0.51 +0.5 11,925 + ABZR86_RS00055 0.51 +0.0 11,925 + ABZR86_RS00055 0.51 -0.5 11,926 - ABZR86_RS00055 0.51 +0.1 11,926 - ABZR86_RS00055 0.51 +0.0 11,926 - ABZR86_RS00055 0.51 +0.2 12,051 - ABZR86_RS00055 0.62 +1.6 12,269 + ABZR86_RS00055 0.81 +0.3 12,269 + ABZR86_RS00055 0.81 -0.1 12,270 - ABZR86_RS00055 0.81 -0.1 12,270 - ABZR86_RS00055 0.81 -0.9 12,270 - ABZR86_RS00055 0.81 +0.1 12,270 - ABZR86_RS00055 0.81 +1.8 12,270 - ABZR86_RS00055 0.81 +0.2 12,447 + -0.5 12,448 - -0.1 12,448 - -0.9 12,647 - ABZR86_RS00060 0.15 +0.0 13,148 + ABZR86_RS00060 0.62 -0.2 13,148 + ABZR86_RS00060 0.62 -0.3 13,148 + ABZR86_RS00060 0.62 -0.3 13,148 + ABZR86_RS00060 0.62 +0.2
Or see this region's nucleotide sequence