Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3075
Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Bacitracin 1.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,882,606 | + | DvMF_3074 | 0.39 | -0.4 | |
3,882,672 | - | DvMF_3074 | 0.45 | -0.6 | |
3,882,711 | + | DvMF_3074 | 0.48 | -0.4 | |
3,882,729 | + | DvMF_3074 | 0.50 | -0.6 | |
3,882,778 | + | DvMF_3074 | 0.54 | +0.2 | |
3,882,813 | - | DvMF_3074 | 0.58 | -0.6 | |
3,882,860 | + | DvMF_3074 | 0.62 | -0.8 | |
3,882,860 | + | DvMF_3074 | 0.62 | -1.3 | |
3,882,908 | + | DvMF_3074 | 0.66 | +3.2 | |
3,882,932 | + | DvMF_3074 | 0.69 | -0.9 | |
3,882,966 | - | DvMF_3074 | 0.72 | -0.7 | |
3,883,008 | + | DvMF_3074 | 0.76 | -0.4 | |
3,883,369 | + | +0.1 | |||
3,883,377 | - | -0.7 | |||
3,883,647 | + | -1.2 | |||
3,883,647 | + | -1.5 | |||
3,883,680 | + | DvMF_3075 | 0.12 | -1.4 | |
3,883,849 | - | DvMF_3075 | 0.30 | -1.3 | |
3,883,862 | - | DvMF_3075 | 0.31 | -1.1 | |
3,883,956 | + | DvMF_3075 | 0.42 | -2.6 | |
3,883,987 | - | DvMF_3075 | 0.45 | -1.7 | |
3,884,450 | + | -1.7 | |||
3,884,566 | + | -0.5 | |||
3,884,649 | - | DvMF_3076 | 0.14 | -0.2 | |
3,885,012 | + | DvMF_3076 | 0.43 | -1.6 | |
3,885,021 | - | DvMF_3076 | 0.44 | -2.0 | |
3,885,183 | + | DvMF_3076 | 0.57 | -1.8 | |
3,885,371 | - | DvMF_3076 | 0.73 | -2.2 |
Or see this region's nucleotide sequence