Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3055 and DvMF_3056 are separated by 172 nucleotides DvMF_3056 and DvMF_3057 are separated by 292 nucleotides
DvMF_3055: DvMF_3055 - peptide methionine sulfoxide reductase (RefSeq), at 3,856,372 to 3,857,100
_3055
DvMF_3056: DvMF_3056 - aminoglycoside phosphotransferase (RefSeq), at 3,857,273 to 3,858,325
_3056
DvMF_3057: DvMF_3057 - DEAD/DEAH box helicase domain protein (RefSeq), at 3,858,618 to 3,860,351
_3057
Position (kb)
3857
3858
3859 Strain fitness (log2 ratio)
-2
-1
0
1 at 3856.385 kb on + strand at 3856.385 kb on + strand at 3856.711 kb on + strand, within DvMF_3055 at 3856.730 kb on + strand, within DvMF_3055 at 3856.749 kb on + strand, within DvMF_3055 at 3856.757 kb on - strand, within DvMF_3055 at 3857.025 kb on + strand, within DvMF_3055 at 3857.033 kb on - strand at 3857.033 kb on - strand at 3857.245 kb on - strand at 3857.526 kb on - strand, within DvMF_3056 at 3857.698 kb on + strand, within DvMF_3056 at 3857.876 kb on + strand, within DvMF_3056 at 3858.103 kb on + strand, within DvMF_3056 at 3858.223 kb on + strand at 3858.352 kb on - strand at 3858.444 kb on - strand at 3858.478 kb on + strand at 3858.694 kb on - strand at 3858.738 kb on + strand at 3858.835 kb on - strand, within DvMF_3057 at 3858.992 kb on + strand, within DvMF_3057 at 3859.211 kb on - strand, within DvMF_3057 at 3859.289 kb on + strand, within DvMF_3057 at 3859.297 kb on - strand, within DvMF_3057 at 3859.304 kb on + strand, within DvMF_3057
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 3,856,385 + -1.4 3,856,385 + -0.9 3,856,711 + DvMF_3055 0.47 +0.3 3,856,730 + DvMF_3055 0.49 -0.6 3,856,749 + DvMF_3055 0.52 -0.4 3,856,757 - DvMF_3055 0.53 -1.6 3,857,025 + DvMF_3055 0.90 -1.0 3,857,033 - -0.8 3,857,033 - +0.4 3,857,245 - -2.2 3,857,526 - DvMF_3056 0.24 +1.1 3,857,698 + DvMF_3056 0.40 -0.9 3,857,876 + DvMF_3056 0.57 -0.5 3,858,103 + DvMF_3056 0.79 -0.3 3,858,223 + -1.1 3,858,352 - -0.4 3,858,444 - -0.3 3,858,478 + -1.4 3,858,694 - +0.0 3,858,738 + -1.0 3,858,835 - DvMF_3057 0.13 -2.1 3,858,992 + DvMF_3057 0.22 -1.1 3,859,211 - DvMF_3057 0.34 -2.2 3,859,289 + DvMF_3057 0.39 -1.5 3,859,297 - DvMF_3057 0.39 -1.7 3,859,304 + DvMF_3057 0.40 -1.5
Or see this region's nucleotide sequence