Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2944 and DvMF_2945 are separated by 151 nucleotides DvMF_2945 and DvMF_2946 are separated by 145 nucleotides DvMF_2946 and DvMF_2947 are separated by 21 nucleotides DvMF_2947 and DvMF_2948 are separated by 227 nucleotides
DvMF_2944: DvMF_2944 - hypothetical protein (RefSeq), at 3,715,860 to 3,716,942
_2944
DvMF_2945: DvMF_2945 - Cupin 2 conserved barrel domain protein (RefSeq), at 3,717,094 to 3,717,591
_2945
DvMF_2946: DvMF_2946 - hypothetical protein (RefSeq), at 3,717,737 to 3,718,792
_2946
DvMF_2947: DvMF_2947 - Carboxymuconolactone decarboxylase (RefSeq), at 3,718,814 to 3,719,548
_2947
DvMF_2948: DvMF_2948 - transcriptional regulator, AraC family (RefSeq), at 3,719,776 to 3,720,675
_2948
Position (kb)
3717
3718
3719 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3716.745 kb on + strand, within DvMF_2944 at 3716.824 kb on - strand, within DvMF_2944 at 3716.839 kb on - strand at 3717.074 kb on - strand at 3717.106 kb on + strand at 3717.357 kb on + strand, within DvMF_2945 at 3717.357 kb on + strand, within DvMF_2945 at 3717.417 kb on - strand, within DvMF_2945 at 3717.424 kb on + strand, within DvMF_2945 at 3717.458 kb on + strand, within DvMF_2945 at 3717.603 kb on + strand at 3718.037 kb on + strand, within DvMF_2946 at 3718.041 kb on - strand, within DvMF_2946 at 3718.184 kb on + strand, within DvMF_2946 at 3718.308 kb on - strand, within DvMF_2946 at 3718.328 kb on - strand, within DvMF_2946 at 3718.704 kb on - strand at 3718.970 kb on + strand, within DvMF_2947 at 3718.978 kb on - strand, within DvMF_2947 at 3718.994 kb on + strand, within DvMF_2947 at 3719.049 kb on - strand, within DvMF_2947 at 3719.113 kb on - strand, within DvMF_2947 at 3719.125 kb on - strand, within DvMF_2947 at 3719.126 kb on - strand, within DvMF_2947 at 3719.187 kb on + strand, within DvMF_2947 at 3719.250 kb on - strand, within DvMF_2947 at 3719.670 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 3,716,745 + DvMF_2944 0.82 -0.4 3,716,824 - DvMF_2944 0.89 -1.3 3,716,839 - -0.8 3,717,074 - -0.5 3,717,106 + -2.0 3,717,357 + DvMF_2945 0.53 -0.8 3,717,357 + DvMF_2945 0.53 +0.1 3,717,417 - DvMF_2945 0.65 -0.7 3,717,424 + DvMF_2945 0.66 -0.0 3,717,458 + DvMF_2945 0.73 -0.6 3,717,603 + -0.8 3,718,037 + DvMF_2946 0.28 -1.1 3,718,041 - DvMF_2946 0.29 -0.8 3,718,184 + DvMF_2946 0.42 -0.3 3,718,308 - DvMF_2946 0.54 -0.9 3,718,328 - DvMF_2946 0.56 -1.5 3,718,704 - -3.2 3,718,970 + DvMF_2947 0.21 -1.2 3,718,978 - DvMF_2947 0.22 -2.8 3,718,994 + DvMF_2947 0.24 -0.5 3,719,049 - DvMF_2947 0.32 -0.5 3,719,113 - DvMF_2947 0.41 +1.0 3,719,125 - DvMF_2947 0.42 -1.1 3,719,126 - DvMF_2947 0.42 +3.4 3,719,187 + DvMF_2947 0.51 -0.2 3,719,250 - DvMF_2947 0.59 -0.5 3,719,670 + -0.7
Or see this region's nucleotide sequence