Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2910 and DvMF_2911 are separated by 60 nucleotides DvMF_2911 and DvMF_2912 are separated by 118 nucleotides
DvMF_2910: DvMF_2910 - glycosyl transferase group 1 (RefSeq), at 3,678,433 to 3,679,689
_2910
DvMF_2911: DvMF_2911 - flagellar protein FliS (RefSeq), at 3,679,750 to 3,680,577
_2911
DvMF_2912: DvMF_2912 - flagellar hook-associated 2 domain protein (RefSeq), at 3,680,696 to 3,682,429
_2912
Position (kb)
3679
3680
3681 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3679.017 kb on - strand, within DvMF_2910 at 3679.075 kb on - strand, within DvMF_2910 at 3679.080 kb on - strand, within DvMF_2910 at 3679.173 kb on + strand, within DvMF_2910 at 3679.189 kb on - strand, within DvMF_2910 at 3679.309 kb on + strand, within DvMF_2910 at 3679.327 kb on + strand, within DvMF_2910 at 3679.357 kb on + strand, within DvMF_2910 at 3679.384 kb on + strand, within DvMF_2910 at 3679.464 kb on - strand, within DvMF_2910 at 3679.464 kb on - strand, within DvMF_2910 at 3679.464 kb on - strand, within DvMF_2910 at 3679.490 kb on + strand, within DvMF_2910 at 3679.604 kb on + strand at 3679.631 kb on - strand at 3679.978 kb on - strand, within DvMF_2911 at 3680.000 kb on - strand, within DvMF_2911 at 3680.113 kb on - strand, within DvMF_2911 at 3680.750 kb on - strand at 3680.764 kb on + strand at 3680.772 kb on - strand at 3681.162 kb on + strand, within DvMF_2912 at 3681.162 kb on + strand, within DvMF_2912 at 3681.323 kb on - strand, within DvMF_2912 at 3681.402 kb on - strand, within DvMF_2912 at 3681.476 kb on + strand, within DvMF_2912
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 3,679,017 - DvMF_2910 0.46 -0.4 3,679,075 - DvMF_2910 0.51 -0.0 3,679,080 - DvMF_2910 0.51 -1.1 3,679,173 + DvMF_2910 0.59 +3.6 3,679,189 - DvMF_2910 0.60 -0.0 3,679,309 + DvMF_2910 0.70 -1.1 3,679,327 + DvMF_2910 0.71 -0.4 3,679,357 + DvMF_2910 0.74 -0.6 3,679,384 + DvMF_2910 0.76 -1.2 3,679,464 - DvMF_2910 0.82 -0.4 3,679,464 - DvMF_2910 0.82 -0.7 3,679,464 - DvMF_2910 0.82 -0.8 3,679,490 + DvMF_2910 0.84 -0.8 3,679,604 + -1.1 3,679,631 - -0.8 3,679,978 - DvMF_2911 0.28 -0.8 3,680,000 - DvMF_2911 0.30 -1.1 3,680,113 - DvMF_2911 0.44 +1.3 3,680,750 - +1.8 3,680,764 + +1.5 3,680,772 - +0.8 3,681,162 + DvMF_2912 0.27 +0.2 3,681,162 + DvMF_2912 0.27 -0.0 3,681,323 - DvMF_2912 0.36 +0.6 3,681,402 - DvMF_2912 0.41 +0.5 3,681,476 + DvMF_2912 0.45 +0.9
Or see this region's nucleotide sequence