Experiment: MoYLS4 with Bacitracin 1.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2850 and DvMF_2851 are separated by 430 nucleotides DvMF_2851 and DvMF_2852 are separated by 421 nucleotides DvMF_2852 and DvMF_2853 overlap by 4 nucleotides
DvMF_2850: DvMF_2850 - hypothetical protein (RefSeq), at 3,602,422 to 3,603,507
_2850
DvMF_2851: DvMF_2851 - diguanylate cyclase and serine/threonine protein kinase with TPR repeats (RefSeq), at 3,603,938 to 3,606,361
_2851
DvMF_2852: DvMF_2852 - nitroreductase (RefSeq), at 3,606,783 to 3,607,319
_2852
DvMF_2853: DvMF_2853 - beta-lactamase domain protein (RefSeq), at 3,607,316 to 3,607,948
_2853
Position (kb)
3603
3604
3605
3606
3607 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 3603.132 kb on + strand, within DvMF_2850 at 3603.643 kb on + strand at 3603.643 kb on + strand at 3603.651 kb on - strand at 3603.651 kb on - strand at 3603.797 kb on + strand at 3603.994 kb on + strand at 3604.002 kb on + strand at 3604.193 kb on + strand, within DvMF_2851 at 3604.266 kb on + strand, within DvMF_2851 at 3604.432 kb on + strand, within DvMF_2851 at 3604.603 kb on - strand, within DvMF_2851 at 3604.608 kb on - strand, within DvMF_2851 at 3604.671 kb on + strand, within DvMF_2851 at 3604.837 kb on + strand, within DvMF_2851 at 3605.270 kb on + strand, within DvMF_2851 at 3605.318 kb on - strand, within DvMF_2851 at 3605.318 kb on - strand, within DvMF_2851 at 3605.380 kb on - strand, within DvMF_2851 at 3605.599 kb on - strand, within DvMF_2851 at 3605.599 kb on - strand, within DvMF_2851 at 3605.614 kb on + strand, within DvMF_2851 at 3605.671 kb on + strand, within DvMF_2851 at 3606.063 kb on + strand, within DvMF_2851 at 3606.081 kb on - strand, within DvMF_2851 at 3606.240 kb on - strand at 3606.301 kb on - strand at 3606.401 kb on - strand at 3606.577 kb on - strand at 3606.655 kb on + strand at 3607.201 kb on + strand, within DvMF_2852
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Bacitracin 1.4 mg/ml remove 3,603,132 + DvMF_2850 0.65 -1.9 3,603,643 + -0.4 3,603,643 + -0.1 3,603,651 - -0.8 3,603,651 - -0.6 3,603,797 + -1.6 3,603,994 + +0.9 3,604,002 + +1.7 3,604,193 + DvMF_2851 0.11 +1.2 3,604,266 + DvMF_2851 0.14 +1.5 3,604,432 + DvMF_2851 0.20 +1.5 3,604,603 - DvMF_2851 0.27 +1.7 3,604,608 - DvMF_2851 0.28 +2.1 3,604,671 + DvMF_2851 0.30 +1.1 3,604,837 + DvMF_2851 0.37 +1.1 3,605,270 + DvMF_2851 0.55 +1.6 3,605,318 - DvMF_2851 0.57 +1.4 3,605,318 - DvMF_2851 0.57 +1.4 3,605,380 - DvMF_2851 0.59 +1.2 3,605,599 - DvMF_2851 0.69 +1.3 3,605,599 - DvMF_2851 0.69 +1.9 3,605,614 + DvMF_2851 0.69 -0.1 3,605,671 + DvMF_2851 0.71 +1.5 3,606,063 + DvMF_2851 0.88 +1.3 3,606,081 - DvMF_2851 0.88 +1.7 3,606,240 - +0.9 3,606,301 - +1.7 3,606,401 - +2.5 3,606,577 - -0.6 3,606,655 + +5.6 3,607,201 + DvMF_2852 0.78 -0.6
Or see this region's nucleotide sequence